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The map label for this gene is 108797804

Identifier: 108797804

GI number: 108797804

Start: 914412

End: 916103

Strand: Direct

Name: 108797804

Synonym: Mmcs_0827

Alternate gene names: NA

Gene position: 914412-916103 (Clockwise)

Preceding gene: 108797802

Following gene: 108797809

Centisome position: 16.03

GC content: 67.67

Gene sequence:

>1692_bases
ATGCGGCGGGCAGATCCAAGAGCCGTCGTTAGCATCGACTTCGTGACCATCACCCCCGATGAGCACCCCCGCCTCAAGAG
CTCCGAGCGCAGCACCTACCAGGCGCTGATCGACCAGCTCGAGCCCAACGACCTCGTCGTTCCCGGCCAGCGGGTCACCG
ACCACCTCAAGGACCACGAGGTCGACTTCGTCGTCGCCATCGAGGGTGCCGGGATCGTGTGCATTGAGGTCAAGGGCGGC
GAGGTCTGGCACGACGGCGACGGCTGGCGCCAGATCCGCGGCGGCCGCCAGTACACCATCGAGCCGGTCCGTCAGGCCCG
CGAGGCGTGTTATGCGTTGCGCGACTTCATCGAGAAGGACCCGCGCTGGACGCAGGGTCGCCTGCGATGGGACCACGTCG
TCGTCCTACCCAACACCGAGCTGCCCGCCGACTTCGGCCTCCCCGATTGTCCGCGCTGGAAGGTCGTCGACCGCACCGAT
CTTCCCAAGCTCGTCGACAAGCTGCGCTACGTCCTCGTCCGCCAGGAGCTCGACCGGCCGCTGCTCACCAAGGAAGGCAT
CGACCAACTCGGCACCGCGCTGTCCGGCCGTGGCCTGCCGCAGCGCGACGTCGTCGCCCGGGCCCTGGCCAACGAGGACG
CCGCCGACGCGCTGACCGAGCACCAGGCGATCATCCTCGACGCGATCCGGCTGCTGAACCGCGTAGAGGTACGCGGCGGC
GCCGGTAGCGGCAAGACGTTCCTGGCCATGGAACAGGCACGGCGGCTGGCCCAGCGCGGTCAACGCGTCGCGCTGGTCTG
CTACTCCCACGGGCTGGCGTCGTACCTCGAGCGCATCTGCGAGACGTGGCCGCGCCGCCAGCAGCCGGCGTACGTGGGGG
AGTTCCACGCCCTCGGTGTGCAGTGGGGTGCGCCGGAAGGACCCGACGAAGCGCTGCGCACCGAGGAGACGGTGCGGTTC
TGGGAACACGACCTCCCGCTACACATGGCCGATCTCGCAGCGCAACTGGAGCCGGGGCATCGATTCGATTCGATCGTGGT
CGACGAGGCGCAGGACTTCGCCGATGCGTGGTGGGATCCGCTGCTCGCCGCGCTGCGAGACCCGGTCGACGGTGGCCTGT
ACGTATTCACCGACGAGGGGCAGCGTGTGTTCAACCGCGTTGGCTCACCACCGGTTCCGTTGGTGCCGCTGATTCTCGAC
CACAATCTGCGCAACACCCGCCAGATCGCCAACGCGTTTCAGCCACTCGTTGACCATCCGATGCGGTTTCTCGGCGGGGA
GGGTCCGGCGGTCACGTTCGTCGCCTGTGGTCGCGAAGAGGCTCTCGGTGTCGGCGACGACCAGGTCGACCTCCTCCTCG
AACAGGGATGGCGCCCCGAGGATCTCGCACTGCTGACCACCGGCAGCCGCCACCCCGAGCAGGCCGAGCGGCAGAAGGAC
GGACACAAGGCCTACTGGGATTCGTTCTGGGACACCGACCAGGTGTTCTACGGCCACGTGCTGGGTTTCAAGGGCCTCGA
GCGCCGGTGTGTTGTCCTCATCGTCAACGAGGAAGGCAAGTTCGAACGCTCCCGCGAACGCCTCTACGTCGGATTGTCCC
GCGCCCGTGACCAACTCGTCGTGTGCGGCGACCCGGACTTCATCCGTGAGGTCGGCGGACCTGACCTGGCGCGGCGGCTG
AATGTGCCGTAA

Upstream 100 bases:

>100_bases
GCTCGGGTCCTGATCAGCGGGAGAATTGTGTCGGCGAGAACGCTCACGGGCCCATCATGCGGGTGGTGGCGGGTGCAGGG
AAGAGCAGCGCAGTTCGGCA

Downstream 100 bases:

>100_bases
CGGCGTGGTCATTACATCGGCGTCGTAGTCGGCCAATCAATTGGATGTGACGCGGAGGAGTGACGAGCGGATCGATTCAG
CGGGGCCCCCGAGGTCGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NERD Domain-Containing Protein; Nerd Domain Protein; Helicase; Nuclease-Related Domain Family

Number of amino acids: Translated: 563; Mature: 563

Protein sequence:

>563_residues
MRRADPRAVVSIDFVTITPDEHPRLKSSERSTYQALIDQLEPNDLVVPGQRVTDHLKDHEVDFVVAIEGAGIVCIEVKGG
EVWHDGDGWRQIRGGRQYTIEPVRQAREACYALRDFIEKDPRWTQGRLRWDHVVVLPNTELPADFGLPDCPRWKVVDRTD
LPKLVDKLRYVLVRQELDRPLLTKEGIDQLGTALSGRGLPQRDVVARALANEDAADALTEHQAIILDAIRLLNRVEVRGG
AGSGKTFLAMEQARRLAQRGQRVALVCYSHGLASYLERICETWPRRQQPAYVGEFHALGVQWGAPEGPDEALRTEETVRF
WEHDLPLHMADLAAQLEPGHRFDSIVVDEAQDFADAWWDPLLAALRDPVDGGLYVFTDEGQRVFNRVGSPPVPLVPLILD
HNLRNTRQIANAFQPLVDHPMRFLGGEGPAVTFVACGREEALGVGDDQVDLLLEQGWRPEDLALLTTGSRHPEQAERQKD
GHKAYWDSFWDTDQVFYGHVLGFKGLERRCVVLIVNEEGKFERSRERLYVGLSRARDQLVVCGDPDFIREVGGPDLARRL
NVP

Sequences:

>Translated_563_residues
MRRADPRAVVSIDFVTITPDEHPRLKSSERSTYQALIDQLEPNDLVVPGQRVTDHLKDHEVDFVVAIEGAGIVCIEVKGG
EVWHDGDGWRQIRGGRQYTIEPVRQAREACYALRDFIEKDPRWTQGRLRWDHVVVLPNTELPADFGLPDCPRWKVVDRTD
LPKLVDKLRYVLVRQELDRPLLTKEGIDQLGTALSGRGLPQRDVVARALANEDAADALTEHQAIILDAIRLLNRVEVRGG
AGSGKTFLAMEQARRLAQRGQRVALVCYSHGLASYLERICETWPRRQQPAYVGEFHALGVQWGAPEGPDEALRTEETVRF
WEHDLPLHMADLAAQLEPGHRFDSIVVDEAQDFADAWWDPLLAALRDPVDGGLYVFTDEGQRVFNRVGSPPVPLVPLILD
HNLRNTRQIANAFQPLVDHPMRFLGGEGPAVTFVACGREEALGVGDDQVDLLLEQGWRPEDLALLTTGSRHPEQAERQKD
GHKAYWDSFWDTDQVFYGHVLGFKGLERRCVVLIVNEEGKFERSRERLYVGLSRARDQLVVCGDPDFIREVGGPDLARRL
NVP
>Mature_563_residues
MRRADPRAVVSIDFVTITPDEHPRLKSSERSTYQALIDQLEPNDLVVPGQRVTDHLKDHEVDFVVAIEGAGIVCIEVKGG
EVWHDGDGWRQIRGGRQYTIEPVRQAREACYALRDFIEKDPRWTQGRLRWDHVVVLPNTELPADFGLPDCPRWKVVDRTD
LPKLVDKLRYVLVRQELDRPLLTKEGIDQLGTALSGRGLPQRDVVARALANEDAADALTEHQAIILDAIRLLNRVEVRGG
AGSGKTFLAMEQARRLAQRGQRVALVCYSHGLASYLERICETWPRRQQPAYVGEFHALGVQWGAPEGPDEALRTEETVRF
WEHDLPLHMADLAAQLEPGHRFDSIVVDEAQDFADAWWDPLLAALRDPVDGGLYVFTDEGQRVFNRVGSPPVPLVPLILD
HNLRNTRQIANAFQPLVDHPMRFLGGEGPAVTFVACGREEALGVGDDQVDLLLEQGWRPEDLALLTTGSRHPEQAERQKD
GHKAYWDSFWDTDQVFYGHVLGFKGLERRCVVLIVNEEGKFERSRERLYVGLSRARDQLVVCGDPDFIREVGGPDLARRL
NVP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63552; Mature: 63552

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRADPRAVVSIDFVTITPDEHPRLKSSERSTYQALIDQLEPNDLVVPGQRVTDHLKDHE
CCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHCCC
VDFVVAIEGAGIVCIEVKGGEVWHDGDGWRQIRGGRQYTIEPVRQAREACYALRDFIEKD
CEEEEEECCCCEEEEEECCCEEEECCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCC
PRWTQGRLRWDHVVVLPNTELPADFGLPDCPRWKVVDRTDLPKLVDKLRYVLVRQELDRP
CCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCC
LLTKEGIDQLGTALSGRGLPQRDVVARALANEDAADALTEHQAIILDAIRLLNRVEVRGG
CCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECCC
AGSGKTFLAMEQARRLAQRGQRVALVCYSHGLASYLERICETWPRRQQPAYVGEFHALGV
CCCCCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCHHCCCEEECE
QWGAPEGPDEALRTEETVRFWEHDLPLHMADLAAQLEPGHRFDSIVVDEAQDFADAWWDP
ECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHH
LLAALRDPVDGGLYVFTDEGQRVFNRVGSPPVPLVPLILDHNLRNTRQIANAFQPLVDHP
HHHHHCCCCCCCEEEEECCCHHHHHHCCCCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHH
MRFLGGEGPAVTFVACGREEALGVGDDQVDLLLEQGWRPEDLALLTTGSRHPEQAERQKD
HHHHCCCCCEEEEEECCCHHCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHCC
GHKAYWDSFWDTDQVFYGHVLGFKGLERRCVVLIVNEEGKFERSRERLYVGLSRARDQLV
CCHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEE
VCGDPDFIREVGGPDLARRLNVP
EECCHHHHHHCCCHHHHHHCCCC
>Mature Secondary Structure
MRRADPRAVVSIDFVTITPDEHPRLKSSERSTYQALIDQLEPNDLVVPGQRVTDHLKDHE
CCCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHCCC
VDFVVAIEGAGIVCIEVKGGEVWHDGDGWRQIRGGRQYTIEPVRQAREACYALRDFIEKD
CEEEEEECCCCEEEEEECCCEEEECCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCC
PRWTQGRLRWDHVVVLPNTELPADFGLPDCPRWKVVDRTDLPKLVDKLRYVLVRQELDRP
CCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCC
LLTKEGIDQLGTALSGRGLPQRDVVARALANEDAADALTEHQAIILDAIRLLNRVEVRGG
CCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECCC
AGSGKTFLAMEQARRLAQRGQRVALVCYSHGLASYLERICETWPRRQQPAYVGEFHALGV
CCCCCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCHHCCCEEECE
QWGAPEGPDEALRTEETVRFWEHDLPLHMADLAAQLEPGHRFDSIVVDEAQDFADAWWDP
ECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHH
LLAALRDPVDGGLYVFTDEGQRVFNRVGSPPVPLVPLILDHNLRNTRQIANAFQPLVDHP
HHHHHCCCCCCCEEEEECCCHHHHHHCCCCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHH
MRFLGGEGPAVTFVACGREEALGVGDDQVDLLLEQGWRPEDLALLTTGSRHPEQAERQKD
HHHHCCCCCEEEEEECCCHHCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHCC
GHKAYWDSFWDTDQVFYGHVLGFKGLERRCVVLIVNEEGKFERSRERLYVGLSRARDQLV
CCHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEE
VCGDPDFIREVGGPDLARRLNVP
EECCHHHHHHCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA