| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797798
Identifier: 108797798
GI number: 108797798
Start: 906114
End: 907451
Strand: Reverse
Name: 108797798
Synonym: Mmcs_0820
Alternate gene names: NA
Gene position: 907451-906114 (Counterclockwise)
Preceding gene: 108797801
Following gene: 108797796
Centisome position: 15.9
GC content: 63.38
Gene sequence:
>1338_bases ATGTCTGATAGCGAAAACACCTCTGTGCCCGTGTGGGCGTTGGCGACCGATGCCGTGGAGGTTCCGGATGTCCTCGAGGG AAAGTCCATGACACCGGAGCGTCTGAGCCAGCTGCGGACGGTCTTGGCAACGTTGGCCGACTCGCCGATCACGACCCTAG AAGCGCATCCGATTACCACTAGACGGCCCCGTAGCGGCGGCATTGCGCTTCATGCGTCGAGCCCCCTCGCACAGAATCTG TCTCACCTTGTCGCCCAGACGGCGAAGTCGACCCCGGCTGCAGCGAATGCCGCCGCGACCGGCGAGGTGCTCTACCGCAT GGTCGTGCCGGCAAAAGTGGCAGCGCAGGTGAGCAGGGGGTTGGTGAGCCCAATGGTGTCCAAGGCCGCCGCCGGCGGCG TCCACAGCGCGCTGATGAACTCGAGCGGGATAGCTGCGCAAGCTACCTTTGTTCCGGTTGCTGGGAAAGCGGCAATCGCA GGCGCAGCGACTGGGTCGGCAGGTACGGCAGGTGTCGCTGTGGCGAGTGCAGGGGCACTCACCGTGGCGGCCCCGCTGGT TCTCATGGCAGTCGCTGTCGGCGCGAGCGCGTATGCCGATCACCAGCGCCAGCAGGCGCTCGAACACATCACCGAGTTAC TCGAGAAGCTTCACGAGGAGAAACTCGATGAGGAACGCAATCGGCTCGACGGCTGCCGAGATGCCATCGAGAAGGCCACC GCTGTCCTGCTCGATCAGGGGCGCGTGGGCGCTTCGCTTGGCCTGGACTCGACGGTCTACGAGATCAACGTGGCGATCGA GCGCGCCAAGCGTCGGCTCGGAAAATGGCACAAGTCGCTGAGTGGGATTATTGGTCCAGTTGAATTGGGGATGGTGCTCA AGGACTTTCCTGGTGTGATCCAGGAAGACGGTGGCGAGTTCCGTGCCCACCTGGAGCTCGCCAGCCTAGCCATCGCCTTG AAGCGCCGCGTTCTTGTTCTGCAGGCGGTTGAACACGCTCAACTCGAGGGCGCAAATCACCCGTTCAAGACCTTCGTGCG CACGCTGCAGAACGACGAGCGGGGCATCAACGAACTCGAATCCGGGATCGTCGACGTCATCCGCGGCTTGTCAACTTTGG AGCTCAAGCGCAGGGGCGGTGTTCGGAGTGCGTTCTTCACGCCGGGTGAGGTCGATGACCTCATGCGTGCGGCTTATCGG CTTCGTGCGCTTAGCGACGAGTTCGGCTTGTCCGCTGGGCAACGCGACGTGACGATCGAGATCGAGCGCAGTGCAGATGG GTCGGTTGTGGTGTTCCCCGGCGCGAGCGCGTTGCCGAGTACCGCGTCTGCTGGCTGA
Upstream 100 bases:
>100_bases AGACAACGGTGCAGCAATGCTGCCAAGTCGGCGACGGTAGTTGCCTGACCTTCACCATGGAGAGCACGTACTGTGGGGCC AGACATGGGGAGGAATACAA
Downstream 100 bases:
>100_bases CTCCGTATTTGCGAAACGCCCCACGCGCTTCAGATCACTGGCGGGACCTGTCGCAGAACACCTTTCGGCGCTGACTGCGG CACTACCTTCGCGGCGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MSDSENTSVPVWALATDAVEVPDVLEGKSMTPERLSQLRTVLATLADSPITTLEAHPITTRRPRSGGIALHASSPLAQNL SHLVAQTAKSTPAAANAAATGEVLYRMVVPAKVAAQVSRGLVSPMVSKAAAGGVHSALMNSSGIAAQATFVPVAGKAAIA GAATGSAGTAGVAVASAGALTVAAPLVLMAVAVGASAYADHQRQQALEHITELLEKLHEEKLDEERNRLDGCRDAIEKAT AVLLDQGRVGASLGLDSTVYEINVAIERAKRRLGKWHKSLSGIIGPVELGMVLKDFPGVIQEDGGEFRAHLELASLAIAL KRRVLVLQAVEHAQLEGANHPFKTFVRTLQNDERGINELESGIVDVIRGLSTLELKRRGGVRSAFFTPGEVDDLMRAAYR LRALSDEFGLSAGQRDVTIEIERSADGSVVVFPGASALPSTASAG
Sequences:
>Translated_445_residues MSDSENTSVPVWALATDAVEVPDVLEGKSMTPERLSQLRTVLATLADSPITTLEAHPITTRRPRSGGIALHASSPLAQNL SHLVAQTAKSTPAAANAAATGEVLYRMVVPAKVAAQVSRGLVSPMVSKAAAGGVHSALMNSSGIAAQATFVPVAGKAAIA GAATGSAGTAGVAVASAGALTVAAPLVLMAVAVGASAYADHQRQQALEHITELLEKLHEEKLDEERNRLDGCRDAIEKAT AVLLDQGRVGASLGLDSTVYEINVAIERAKRRLGKWHKSLSGIIGPVELGMVLKDFPGVIQEDGGEFRAHLELASLAIAL KRRVLVLQAVEHAQLEGANHPFKTFVRTLQNDERGINELESGIVDVIRGLSTLELKRRGGVRSAFFTPGEVDDLMRAAYR LRALSDEFGLSAGQRDVTIEIERSADGSVVVFPGASALPSTASAG >Mature_444_residues SDSENTSVPVWALATDAVEVPDVLEGKSMTPERLSQLRTVLATLADSPITTLEAHPITTRRPRSGGIALHASSPLAQNLS HLVAQTAKSTPAAANAAATGEVLYRMVVPAKVAAQVSRGLVSPMVSKAAAGGVHSALMNSSGIAAQATFVPVAGKAAIAG AATGSAGTAGVAVASAGALTVAAPLVLMAVAVGASAYADHQRQQALEHITELLEKLHEEKLDEERNRLDGCRDAIEKATA VLLDQGRVGASLGLDSTVYEINVAIERAKRRLGKWHKSLSGIIGPVELGMVLKDFPGVIQEDGGEFRAHLELASLAIALK RRVLVLQAVEHAQLEGANHPFKTFVRTLQNDERGINELESGIVDVIRGLSTLELKRRGGVRSAFFTPGEVDDLMRAAYRL RALSDEFGLSAGQRDVTIEIERSADGSVVVFPGASALPSTASAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46461; Mature: 46330
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSENTSVPVWALATDAVEVPDVLEGKSMTPERLSQLRTVLATLADSPITTLEAHPITT CCCCCCCCCEEEEEECCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCC RRPRSGGIALHASSPLAQNLSHLVAQTAKSTPAAANAAATGEVLYRMVVPAKVAAQVSRG CCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LVSPMVSKAAAGGVHSALMNSSGIAAQATFVPVAGKAAIAGAATGSAGTAGVAVASAGAL HHHHHHHHHHHCHHHHHHHCCCCCEEEEEEEECCCCHHHCCCCCCCCCCCHHHHHCCCHH TVAAPLVLMAVAVGASAYADHQRQQALEHITELLEKLHEEKLDEERNRLDGCRDAIEKAT HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVLLDQGRVGASLGLDSTVYEINVAIERAKRRLGKWHKSLSGIIGPVELGMVLKDFPGVI HHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH QEDGGEFRAHLELASLAIALKRRVLVLQAVEHAQLEGANHPFKTFVRTLQNDERGINELE HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHCCHHHHH SGIVDVIRGLSTLELKRRGGVRSAFFTPGEVDDLMRAAYRLRALSDEFGLSAGQRDVTIE HHHHHHHHCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE IERSADGSVVVFPGASALPSTASAG EECCCCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure SDSENTSVPVWALATDAVEVPDVLEGKSMTPERLSQLRTVLATLADSPITTLEAHPITT CCCCCCCCEEEEEECCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCC RRPRSGGIALHASSPLAQNLSHLVAQTAKSTPAAANAAATGEVLYRMVVPAKVAAQVSRG CCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LVSPMVSKAAAGGVHSALMNSSGIAAQATFVPVAGKAAIAGAATGSAGTAGVAVASAGAL HHHHHHHHHHHCHHHHHHHCCCCCEEEEEEEECCCCHHHCCCCCCCCCCCHHHHHCCCHH TVAAPLVLMAVAVGASAYADHQRQQALEHITELLEKLHEEKLDEERNRLDGCRDAIEKAT HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVLLDQGRVGASLGLDSTVYEINVAIERAKRRLGKWHKSLSGIIGPVELGMVLKDFPGVI HHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH QEDGGEFRAHLELASLAIALKRRVLVLQAVEHAQLEGANHPFKTFVRTLQNDERGINELE HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHCCHHHHH SGIVDVIRGLSTLELKRRGGVRSAFFTPGEVDDLMRAAYRLRALSDEFGLSAGQRDVTIE HHHHHHHHCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE IERSADGSVVVFPGASALPSTASAG EECCCCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA