| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797782
Identifier: 108797782
GI number: 108797782
Start: 872764
End: 873618
Strand: Direct
Name: 108797782
Synonym: Mmcs_0804
Alternate gene names: NA
Gene position: 872764-873618 (Clockwise)
Preceding gene: 108797781
Following gene: 108797783
Centisome position: 15.3
GC content: 55.09
Gene sequence:
>855_bases TTGAGGGGAGGCGCTTTGCCGAAGAGGATTGTCGACGTACCGGTACATGTAGATGAATCTGCGCTGTTACAGAGGGGCTG GCATGCTGTCGAAGCACGCGCGCGGGTCACGACTGACACGTGGAGCAATGTGGCGGTGTCACTCACTCTCGAATTTTTAC AAGACCATTGGACCAGCCGCTTCGTAGATCCGAGATTGTGGGTCAGCCCAGTGGTGCTGGAGGTCTCTAGTAAAACCCAA GGGGAAACAATCTATGTCGCCTCGAGCCACTGGGATATTGATTCTGTTGGTGGCCGGGCCGTCCGGGATTCCATATCTGG CACAATTTCGTACAGCGATTTTCCGATCAAAGCATCTGACCTGTACCTCAGATTGACGAGCTTCGACGCTGCCGACGTAG GCGTTGGAATCAGACCGTTACCGAGGATAGCGCGACGGCTGGACATTCAATTTGAGGAGTCTGCCACCGATCTTGCAGTG CTGGATCTAGAGCTCGACGTCGACGCGTATGTCACCGAAGAGGATGACTCCGACGGGGACGTCGTAGTCTACGTACGCGG CATGGCTACTTTGGCCGATTACGGGAAACTTGTCGAAGCAACCGTCAGGCGTGATGAAGGCCATGAAGAAGGCGAGTTCG AGATCAAGCTGCCGGATGTCCAGGTGGATGTGCTCGACGATACAGATTTCTTGCTAAGCCGATTGACGGGAACTCACTAC ATGGAAGTCAATGGTTCATGCCCGAACGACGTACCAAAGAGGGCGGCCGAGTGGGTTGACTTCTTGACCGCGTACTCGCA GGACCTCCCGGGTGATCCGTCGAGCGTTGTTGTACGCCTTGTTGATAGGGCATAG
Upstream 100 bases:
>100_bases GGGCTGGCGCTCAGTAGGGCTACGGATCGCGGCTCCCTTGTGTCCACCACACACGGAATTGTGACTGCGCAGCCGCAGTG AGTAGGACGTACATCGCGAA
Downstream 100 bases:
>100_bases CAATTGATAGGGGTTAGTAACATGGGACTCGATAACGGCAGCCGGGTTGTCTTGTCGGATTTGCGCCGGGATTAGGGACG AGTCGCAGAATTCGCTAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MRGGALPKRIVDVPVHVDESALLQRGWHAVEARARVTTDTWSNVAVSLTLEFLQDHWTSRFVDPRLWVSPVVLEVSSKTQ GETIYVASSHWDIDSVGGRAVRDSISGTISYSDFPIKASDLYLRLTSFDAADVGVGIRPLPRIARRLDIQFEESATDLAV LDLELDVDAYVTEEDDSDGDVVVYVRGMATLADYGKLVEATVRRDEGHEEGEFEIKLPDVQVDVLDDTDFLLSRLTGTHY MEVNGSCPNDVPKRAAEWVDFLTAYSQDLPGDPSSVVVRLVDRA
Sequences:
>Translated_284_residues MRGGALPKRIVDVPVHVDESALLQRGWHAVEARARVTTDTWSNVAVSLTLEFLQDHWTSRFVDPRLWVSPVVLEVSSKTQ GETIYVASSHWDIDSVGGRAVRDSISGTISYSDFPIKASDLYLRLTSFDAADVGVGIRPLPRIARRLDIQFEESATDLAV LDLELDVDAYVTEEDDSDGDVVVYVRGMATLADYGKLVEATVRRDEGHEEGEFEIKLPDVQVDVLDDTDFLLSRLTGTHY MEVNGSCPNDVPKRAAEWVDFLTAYSQDLPGDPSSVVVRLVDRA >Mature_284_residues MRGGALPKRIVDVPVHVDESALLQRGWHAVEARARVTTDTWSNVAVSLTLEFLQDHWTSRFVDPRLWVSPVVLEVSSKTQ GETIYVASSHWDIDSVGGRAVRDSISGTISYSDFPIKASDLYLRLTSFDAADVGVGIRPLPRIARRLDIQFEESATDLAV LDLELDVDAYVTEEDDSDGDVVVYVRGMATLADYGKLVEATVRRDEGHEEGEFEIKLPDVQVDVLDDTDFLLSRLTGTHY MEVNGSCPNDVPKRAAEWVDFLTAYSQDLPGDPSSVVVRLVDRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31495; Mature: 31495
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGGALPKRIVDVPVHVDESALLQRGWHAVEARARVTTDTWSNVAVSLTLEFLQDHWTSR CCCCCCCHHEEEECEECCHHHHHHCCCHHHHCCEEEEECCCCCEEEEEEHHHHHHHHHHH FVDPRLWVSPVVLEVSSKTQGETIYVASSHWDIDSVGGRAVRDSISGTISYSDFPIKASD CCCCCHHHCEEEEEECCCCCCCEEEEEECCCCCHHCCCHHHHHCCCCEEEECCCCCCCCC LYLRLTSFDAADVGVGIRPLPRIARRLDIQFEESATDLAVLDLELDVDAYVTEEDDSDGD EEEEEECCCCHHCCCCCCCHHHHHHHHCCEECCCCCCEEEEEEEECCCEEEECCCCCCCC VVVYVRGMATLADYGKLVEATVRRDEGHEEGEFEIKLPDVQVDVLDDTDFLLSRLTGTHY EEEEEECHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCHHHHHHHHCCCEE MEVNGSCPNDVPKRAAEWVDFLTAYSQDLPGDPSSVVVRLVDRA EEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEECCC >Mature Secondary Structure MRGGALPKRIVDVPVHVDESALLQRGWHAVEARARVTTDTWSNVAVSLTLEFLQDHWTSR CCCCCCCHHEEEECEECCHHHHHHCCCHHHHCCEEEEECCCCCEEEEEEHHHHHHHHHHH FVDPRLWVSPVVLEVSSKTQGETIYVASSHWDIDSVGGRAVRDSISGTISYSDFPIKASD CCCCCHHHCEEEEEECCCCCCCEEEEEECCCCCHHCCCHHHHHCCCCEEEECCCCCCCCC LYLRLTSFDAADVGVGIRPLPRIARRLDIQFEESATDLAVLDLELDVDAYVTEEDDSDGD EEEEEECCCCHHCCCCCCCHHHHHHHHCCEECCCCCCEEEEEEEECCCEEEECCCCCCCC VVVYVRGMATLADYGKLVEATVRRDEGHEEGEFEIKLPDVQVDVLDDTDFLLSRLTGTHY EEEEEECHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCHHHHHHHHCCCEE MEVNGSCPNDVPKRAAEWVDFLTAYSQDLPGDPSSVVVRLVDRA EEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA