| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797776
Identifier: 108797776
GI number: 108797776
Start: 860054
End: 861277
Strand: Reverse
Name: 108797776
Synonym: Mmcs_0798
Alternate gene names: NA
Gene position: 861277-860054 (Counterclockwise)
Preceding gene: 108797777
Following gene: 108797775
Centisome position: 15.1
GC content: 71.49
Gene sequence:
>1224_bases ATGCCGACCGCGTTCCGCTACCCGCCCACCGGCCGCCGCGCCCGCCTCGTGAACGCCGCGCGCACGCTCGGCATCGACCT CCTCCCCGACGACGCCACGGCCCGCCGGTTCATCGAGGGCCTCACCGAAGGCGACCCCACCGCCGAACGCTTCGTCGCCG AGACCTACCACGGCGACCTCGGCGCGCGGAGAGCCCGCGACCTCGTCGAGCAGGCGCAAGAACAAGGCATCGACACCGTC CCCGACGCCCCGGCTTCCATGCGCACCCTCTTCGCCGAATTCGAGACGCGACCCGACTGGCTCGACCCCGAGCTGCTCGA ACAGGGCGCCGCCGTCTGGCGCCGCTGGGCTTACGCGCTCGGCGCGCTGGGCAACGCCGGCACCAACGACACCTACACCG AGGGCTGGCTCGCCGTCCCGCTGTCGTTGTCCGGCGGCTACGCCGGCGACCGGGCGCTGCACCGCTACCTCGAGACCTCC CGCTGGTGGATCGAGGTCAGCCGCCCCGGTGCCCTGCTCACCCCGAACTCGCCCGCCCGCAACATCTCTCTGCACGTGCG GATCATGCATGTCAGCGTCCGCGACCGCGTCAGACGCCACCCCGAATGGGACGCCGAGCGCTGGGGTCTGCCGATCAGCC AGTCCGCCATGCTGCTCACCCTGCTCGGCGGCAGCGTCGCCCCGGCCCTCGGCCTGTTCGCCCTCGGGCACCTCACCTCA CCGCACGAGATGCGCGCCGTGCTGCACTTCAACCGCTACTGCGGCCACCTCGTCGGCGTGCGCTGCGACGGCTACTTCCC CGAGACCGTCGCCGACGCCTGGCGCATCCTGTTCATGGCCGACGCCGCCCGCAGCTACGACAGCGCCGACAACGGCGCCG AACTCGTCGAATCCTTCGTCCCCGCCTTCGAACCCACGCCGGCCCATCGCGGCCTCCAACGCCTCAGAGCCACCTACCAC TACAGAATCCAGGCCGGCTACCTCGGCCTCTACATGCTGCCGTGGAACCGCCGCCGCTACCGCCTGCCGTCCGCACTGCC AGGCGTCGCGCTGCTGCTCGCGAAGGCACCGGTCATCGCGGCTCTCGAAGTCGCACGACGCCTCAGTCCCCGGGTCGACC GCCGCTGGCAGCAGGCCAACCTCAGACGGTGGGAGCGCTGGCTGGAATGGCAGTCCGCGGGTAAGGCCCAGAAATTCGAG GCAGCCACGCCGCTGCGCCGTTAG
Upstream 100 bases:
>100_bases GGAAGATGTTCCTCTCCGCGGTGGCGGACGGCGATGCCACAGGCGTGCTGACGTTGTAGTTCGACGACGCGTCGCCGCCC CCATGCGCTAAGACAGGAAG
Downstream 100 bases:
>100_bases CGTGGAAGTCATGGCCGAATCCATCGACGTCGCGCACCCGCCGCAGGCGCTGCTCAACGTCATCAACCCCGCCCTGCGGA CCGCGCTGCGCACGCCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MPTAFRYPPTGRRARLVNAARTLGIDLLPDDATARRFIEGLTEGDPTAERFVAETYHGDLGARRARDLVEQAQEQGIDTV PDAPASMRTLFAEFETRPDWLDPELLEQGAAVWRRWAYALGALGNAGTNDTYTEGWLAVPLSLSGGYAGDRALHRYLETS RWWIEVSRPGALLTPNSPARNISLHVRIMHVSVRDRVRRHPEWDAERWGLPISQSAMLLTLLGGSVAPALGLFALGHLTS PHEMRAVLHFNRYCGHLVGVRCDGYFPETVADAWRILFMADAARSYDSADNGAELVESFVPAFEPTPAHRGLQRLRATYH YRIQAGYLGLYMLPWNRRRYRLPSALPGVALLLAKAPVIAALEVARRLSPRVDRRWQQANLRRWERWLEWQSAGKAQKFE AATPLRR
Sequences:
>Translated_407_residues MPTAFRYPPTGRRARLVNAARTLGIDLLPDDATARRFIEGLTEGDPTAERFVAETYHGDLGARRARDLVEQAQEQGIDTV PDAPASMRTLFAEFETRPDWLDPELLEQGAAVWRRWAYALGALGNAGTNDTYTEGWLAVPLSLSGGYAGDRALHRYLETS RWWIEVSRPGALLTPNSPARNISLHVRIMHVSVRDRVRRHPEWDAERWGLPISQSAMLLTLLGGSVAPALGLFALGHLTS PHEMRAVLHFNRYCGHLVGVRCDGYFPETVADAWRILFMADAARSYDSADNGAELVESFVPAFEPTPAHRGLQRLRATYH YRIQAGYLGLYMLPWNRRRYRLPSALPGVALLLAKAPVIAALEVARRLSPRVDRRWQQANLRRWERWLEWQSAGKAQKFE AATPLRR >Mature_406_residues PTAFRYPPTGRRARLVNAARTLGIDLLPDDATARRFIEGLTEGDPTAERFVAETYHGDLGARRARDLVEQAQEQGIDTVP DAPASMRTLFAEFETRPDWLDPELLEQGAAVWRRWAYALGALGNAGTNDTYTEGWLAVPLSLSGGYAGDRALHRYLETSR WWIEVSRPGALLTPNSPARNISLHVRIMHVSVRDRVRRHPEWDAERWGLPISQSAMLLTLLGGSVAPALGLFALGHLTSP HEMRAVLHFNRYCGHLVGVRCDGYFPETVADAWRILFMADAARSYDSADNGAELVESFVPAFEPTPAHRGLQRLRATYHY RIQAGYLGLYMLPWNRRRYRLPSALPGVALLLAKAPVIAALEVARRLSPRVDRRWQQANLRRWERWLEWQSAGKAQKFEA ATPLRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45904; Mature: 45773
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTAFRYPPTGRRARLVNAARTLGIDLLPDDATARRFIEGLTEGDPTAERFVAETYHGDL CCCCCCCCCCCCHHHHHHHHHHCCCEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCC GARRARDLVEQAQEQGIDTVPDAPASMRTLFAEFETRPDWLDPELLEQGAAVWRRWAYAL HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH GALGNAGTNDTYTEGWLAVPLSLSGGYAGDRALHRYLETSRWWIEVSRPGALLTPNSPAR HCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCEEECCCCCCC NISLHVRIMHVSVRDRVRRHPEWDAERWGLPISQSAMLLTLLGGSVAPALGLFALGHLTS CEEEEEEEEEEEHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCC PHEMRAVLHFNRYCGHLVGVRCDGYFPETVADAWRILFMADAARSYDSADNGAELVESFV HHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC PAFEPTPAHRGLQRLRATYHYRIQAGYLGLYMLPWNRRRYRLPSALPGVALLLAKAPVIA CCCCCCHHHHHHHHHHHHHEEEEEECCEEEEEECCCCCCEECCCCCHHHHHHHHHCHHHH ALEVARRLSPRVDRRWQQANLRRWERWLEWQSAGKAQKFEAATPLRR HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCC >Mature Secondary Structure PTAFRYPPTGRRARLVNAARTLGIDLLPDDATARRFIEGLTEGDPTAERFVAETYHGDL CCCCCCCCCCCHHHHHHHHHHCCCEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCC GARRARDLVEQAQEQGIDTVPDAPASMRTLFAEFETRPDWLDPELLEQGAAVWRRWAYAL HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH GALGNAGTNDTYTEGWLAVPLSLSGGYAGDRALHRYLETSRWWIEVSRPGALLTPNSPAR HCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCEEECCCCCCC NISLHVRIMHVSVRDRVRRHPEWDAERWGLPISQSAMLLTLLGGSVAPALGLFALGHLTS CEEEEEEEEEEEHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCC PHEMRAVLHFNRYCGHLVGVRCDGYFPETVADAWRILFMADAARSYDSADNGAELVESFV HHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC PAFEPTPAHRGLQRLRATYHYRIQAGYLGLYMLPWNRRRYRLPSALPGVALLLAKAPVIA CCCCCCHHHHHHHHHHHHHEEEEEECCEEEEEECCCCCCEECCCCCHHHHHHHHHCHHHH ALEVARRLSPRVDRRWQQANLRRWERWLEWQSAGKAQKFEAATPLRR HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA