| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is yajQ [C]
Identifier: 108797756
GI number: 108797756
Start: 831917
End: 832456
Strand: Reverse
Name: yajQ [C]
Synonym: Mmcs_0777
Alternate gene names: 108797756
Gene position: 832456-831917 (Counterclockwise)
Preceding gene: 108797757
Following gene: 108797753
Centisome position: 14.59
GC content: 62.78
Gene sequence:
>540_bases ATGGGCCGAAGACGAAAACGCCCGAACAAGCCAGGAGGGAGCGAGTCCATGGCGGATTCCAGCTTCGACGTCGTGAGCAA GGTCGATCGTCAGGAGGTCGACAACGCGCTGAACCAGGCAGCCAAGGAGTTGAGCACCCGCTTCGACTTCCGGGGCACCG ACACCACCATCGCCTGGAAGGGCGAGGAGGCCATCGAGATCGTCAGTTCCACCGAGGAGCGGGTCAAGGCCGCCGTCGAC GTCTTCAAGGAGAAGCTCGTCCGCCGCGACATCTCGATGAAGGCCTTCGACGCCGGCGATCCGCAGCCCAGCGGGAAGAC CTACAAGGTCAACGGCACCATCAAAGAGGGCATCACCAGCGAGCAGGCCAAGAAGATCACCAAGATCATCCGCGACGAGG GTCCCAAGGGCGTCAAGGCCCAGATCCAGGGCGACGAGATCCGCGTCAGCAGCAAGAAGCGCGACGATCTGCAGACCGTC ATCTCGCTGCTCAAGCAGGCCGACCTCGAGGTGGCGCTGCAGTTCGTCAACTACCGCTGA
Upstream 100 bases:
>100_bases CCGACGGATTTACAGTCCGCTCCCATTGGCCGCTCGGGCAACCTGCCGGGTGGTCGCACCGTCCTCTCGGATTTGGTGCG ACTAGCAGGGTACAACGAGG
Downstream 100 bases:
>100_bases GCAACTCCGGGGTGACGTCGCGGCCGACGGTCTTGCCGTCGTCCCGGTGATCGGTGGTGTTGCGGCACTCCCCCGAGATC GTGAACGCCAGCAGCCCGTC
Product: putative nucleotide-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MGRRRKRPNKPGGSESMADSSFDVVSKVDRQEVDNALNQAAKELSTRFDFRGTDTTIAWKGEEAIEIVSSTEERVKAAVD VFKEKLVRRDISMKAFDAGDPQPSGKTYKVNGTIKEGITSEQAKKITKIIRDEGPKGVKAQIQGDEIRVSSKKRDDLQTV ISLLKQADLEVALQFVNYR
Sequences:
>Translated_179_residues MGRRRKRPNKPGGSESMADSSFDVVSKVDRQEVDNALNQAAKELSTRFDFRGTDTTIAWKGEEAIEIVSSTEERVKAAVD VFKEKLVRRDISMKAFDAGDPQPSGKTYKVNGTIKEGITSEQAKKITKIIRDEGPKGVKAQIQGDEIRVSSKKRDDLQTV ISLLKQADLEVALQFVNYR >Mature_178_residues GRRRKRPNKPGGSESMADSSFDVVSKVDRQEVDNALNQAAKELSTRFDFRGTDTTIAWKGEEAIEIVSSTEERVKAAVDV FKEKLVRRDISMKAFDAGDPQPSGKTYKVNGTIKEGITSEQAKKITKIIRDEGPKGVKAQIQGDEIRVSSKKRDDLQTVI SLLKQADLEVALQFVNYR
Specific function: Unknown
COG id: COG1666
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0234 family [H]
Homologues:
Organism=Escherichia coli, GI87081737, Length=163, Percent_Identity=41.7177914110429, Blast_Score=120, Evalue=4e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007551 [H]
Pfam domain/function: PF04461 DUF520 [H]
EC number: NA
Molecular weight: Translated: 19961; Mature: 19830
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRRRKRPNKPGGSESMADSSFDVVSKVDRQEVDNALNQAAKELSTRFDFRGTDTTIAWK CCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC GEEAIEIVSSTEERVKAAVDVFKEKLVRRDISMKAFDAGDPQPSGKTYKVNGTIKEGITS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCHHHHCCCH EQAKKITKIIRDEGPKGVKAQIQGDEIRVSSKKRDDLQTVISLLKQADLEVALQFVNYR HHHHHHHHHHHCCCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GRRRKRPNKPGGSESMADSSFDVVSKVDRQEVDNALNQAAKELSTRFDFRGTDTTIAWK CCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC GEEAIEIVSSTEERVKAAVDVFKEKLVRRDISMKAFDAGDPQPSGKTYKVNGTIKEGITS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCHHHHCCCH EQAKKITKIIRDEGPKGVKAQIQGDEIRVSSKKRDDLQTVISLLKQADLEVALQFVNYR HHHHHHHHHHHCCCCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA