Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is regX3 [H]
Identifier: 108797641
GI number: 108797641
Start: 722373
End: 723059
Strand: Direct
Name: regX3 [H]
Synonym: Mmcs_0661
Alternate gene names: 108797641
Gene position: 722373-723059 (Clockwise)
Preceding gene: 108797640
Following gene: 108797644
Centisome position: 12.66
GC content: 67.69
Gene sequence:
>687_bases ATGACCAGTGTGTTGATCGTGGAGGACGAGGAGTCCTTGGCCGATCCCCTGGCCTTCCTGCTGCGCAAAGAGGGCTTCGA GACCACCGTGGTGGCCGACGGACCCTCGGCGCTGGCCGAGTTCGACCGCGCCGGCGCCGACATCGTGCTGCTGGATCTGA TGCTGCCCGGAATGAGCGGCACCGACGTCTGCAAGCAACTGCGCGCCCGGTCCAGCGTGCCGGTCATCATGGTGACCGCC CGCGACAGCGAGATCGACAAGGTCGTCGGGCTCGAACTCGGCGCCGACGACTATGTCACCAAACCGTATTCGGCCCGCGA ACTGATCGCGCGGATCCGGGCGGTGCTGCGCCGCGGCACCGACGTCGACGACCCCGGCGTCCCCGACGGGGTGCTGGAGG CCGGACCCGTGCGGATGGACGTCGAGCGCCACGTGGTCAGCGTCAACGGCCAGTCGATCACGTTGCCGCTCAAGGAGTTC GACCTCCTCGAGTACCTGATGCGCAACAGCGGCCGGGTGCTGACGCGCGGTCAGCTCATCGACCGGGTGTGGGGTGCGGA CTACGTCGGTGACACCAAGACCCTCGACGTCCACGTCAAGCGGCTGCGGTCGAAGATCGAGGCGGATCCGGCGAACCCGG TGCACCTGGTCACGGTGCGCGGTCTGGGATACAAGCTCGAGGGCTGA
Upstream 100 bases:
>100_bases TCAGCCGGGCACCGGATCGACGTTCACCCTGTCGATTCCGGCCTACCCGCGACCTGAGGAAGTAGACGATGAACCGAGTC AATAGGAGGACCCGAGACCA
Downstream 100 bases:
>100_bases ACCCGCCCGACGCCGGACACCTATCCGGTTGTGCCGCCCATGATCTCGAACACCTCGAAGGTGTTCACCCAGGCGAGGAC CGAGGGGTCGTGTCGGCCGA
Product: two component transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MTSVLIVEDEESLADPLAFLLRKEGFETTVVADGPSALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTA RDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGTDVDDPGVPDGVLEAGPVRMDVERHVVSVNGQSITLPLKEF DLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
Sequences:
>Translated_228_residues MTSVLIVEDEESLADPLAFLLRKEGFETTVVADGPSALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTA RDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGTDVDDPGVPDGVLEAGPVRMDVERHVVSVNGQSITLPLKEF DLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG >Mature_227_residues TSVLIVEDEESLADPLAFLLRKEGFETTVVADGPSALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTAR DSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGTDVDDPGVPDGVLEAGPVRMDVERHVVSVNGQSITLPLKEFD LLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG
Specific function: Part of the two-component regulatory system senX3/regX3. Once phosphorylated by senX3, activates the expression of several operons/genes involved in phosphate assimilation and metabolism, such as pstSCAB, phnDCE, and phoA [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786599, Length=227, Percent_Identity=39.647577092511, Blast_Score=162, Evalue=2e-41, Organism=Escherichia coli, GI1790860, Length=227, Percent_Identity=38.7665198237885, Blast_Score=158, Evalue=2e-40, Organism=Escherichia coli, GI1788394, Length=225, Percent_Identity=37.7777777777778, Blast_Score=156, Evalue=1e-39, Organism=Escherichia coli, GI1789809, Length=226, Percent_Identity=37.6106194690265, Blast_Score=155, Evalue=3e-39, Organism=Escherichia coli, GI1786911, Length=229, Percent_Identity=38.4279475982533, Blast_Score=150, Evalue=6e-38, Organism=Escherichia coli, GI87082012, Length=223, Percent_Identity=37.6681614349776, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI1786784, Length=226, Percent_Identity=38.4955752212389, Blast_Score=148, Evalue=3e-37, Organism=Escherichia coli, GI2367329, Length=229, Percent_Identity=40.174672489083, Blast_Score=137, Evalue=7e-34, Organism=Escherichia coli, GI1789402, Length=224, Percent_Identity=36.6071428571429, Blast_Score=135, Evalue=2e-33, Organism=Escherichia coli, GI1790863, Length=232, Percent_Identity=32.3275862068966, Blast_Score=135, Evalue=3e-33, Organism=Escherichia coli, GI1787229, Length=230, Percent_Identity=36.5217391304348, Blast_Score=129, Evalue=1e-31, Organism=Escherichia coli, GI1787375, Length=225, Percent_Identity=34.2222222222222, Blast_Score=125, Evalue=2e-30, Organism=Escherichia coli, GI1790552, Length=225, Percent_Identity=34.2222222222222, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI145693140, Length=232, Percent_Identity=31.4655172413793, Blast_Score=117, Evalue=6e-28, Organism=Escherichia coli, GI1788550, Length=109, Percent_Identity=35.7798165137615, Blast_Score=67, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 24908; Mature: 24777
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVLIVEDEESLADPLAFLLRKEGFETTVVADGPSALAEFDRAGADIVLLDLMLPGMSG CCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCEEEEEECCCCCCH TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGT HHHHHHHHHCCCCCEEEEEECCCCCHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC DVDDPGVPDGVLEAGPVRMDVERHVVSVNGQSITLPLKEFDLLEYLMRNSGRVLTRGQLI CCCCCCCCCCCCCCCCEEEECCCEEEEECCCEEEEEHHHHHHHHHHHHCCCCEEEHHHHH DRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG HHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEECC >Mature Secondary Structure TSVLIVEDEESLADPLAFLLRKEGFETTVVADGPSALAEFDRAGADIVLLDLMLPGMSG CEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCEEEEEECCCCCCH TDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGT HHHHHHHHHCCCCCEEEEEECCCCCHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC DVDDPGVPDGVLEAGPVRMDVERHVVSVNGQSITLPLKEFDLLEYLMRNSGRVLTRGQLI CCCCCCCCCCCCCCCCEEEECCCEEEEECCCEEEEEHHHHHHHHHHHHCCCCEEEHHHHH DRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG HHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA