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The map label for this gene is 108797614

Identifier: 108797614

GI number: 108797614

Start: 697108

End: 698535

Strand: Reverse

Name: 108797614

Synonym: Mmcs_0634

Alternate gene names: NA

Gene position: 698535-697108 (Counterclockwise)

Preceding gene: 108797618

Following gene: 108797613

Centisome position: 12.24

GC content: 65.97

Gene sequence:

>1428_bases
GTGGCAAAAACGTTCGTGGGGTCGCGTGTCCGGCAACTGCGCAACGAACGCGGATACAGCCAGGCGGCGCTGGCGCAGAT
GCTCGAGATCTCCCCGAGTTATCTGAACCAGATCGAGCACGACGTCCGCCCGCTGACCGTCGCGGTGCTGCTGCGCATCA
CCGAGGTGTTCGGCGTCGACGCCACGTTCTTCGCCTCCCAGGACGACACCCGACTGGTCGCCGAATTACGCGAAGTGGCG
ATGGACCGCGAACTGGGCGTCGAGGTCGACGTCTCCGAGATCGCCGACATGGTCGCGGCGCATCCGACGCTGGCCCGCGC
CATGGTCAACCTGCACCGCCGCTACCGGCTGACCACCACGCAGTTGGCCGCCGCGACCGAGGACCGCTACAGCGACGGCA
CCGGGTCCAGTTCGGGTTCGGGCTCGATCTCCATGCCGCACGAGGAAGTGCGCGACTACTTCTACCAACGCCAGAACTAT
CTGCACGAACTCGACTCCGCGGCCGAAGACCTCACCGTCCGCATGCGCATGCATCGCGGCGACCTCGCCGGTGAACTGTC
CAACCGGCTGTCCACGGTGCACGGCGTGCACATCGTGCGGCGCATCGACCTCGGCGAGACCGTGCTGCACCGGTTCGAAC
CCGGCACCAAGACACTCGAGATGAGCACCCACCTGTCGGTCGGTCAGCAGGTGTTCAAGATGGCGGCCGAACTGGCCTAC
CTCGAATTCGGCGACCTCATCGACAAGATGGTCGACGAGGGCATGTTCACCAGCGACGAATCGCGCACCCTGGCCCGCCT
CGGTCTGGCCAACTACTTCGCCGCCGCCACGGTGCTGCCGTATCGGCAGTTTCACGACGTCGCGGAGAACTTCCGCTACG
ACGTCGAACGGCTCTCGGCGTTCTACCAGGTCAGCTACGAGACGATCGGGCACCGGCTCTCGACGCTGCAGCGCCCGTCG
ATGCGCGGGGTGCCGTTCTCCTTCGTCCGCGTGGACCGCGCGGGCAACATGTCGAAACGCCAGTCCGCGACGGGTTTTCA
CTTCTCGTCCAGCGGTGGCACCTGCCCGCTGTGGAACGTCTACGAGACCTTCGCCAACCCGGGCAAGATCCTGGTGCAGA
TCGCCCAGATGCCCGACGGCCGCAACTACATGTGGGTGGCGCGGACCGTCGAGCGCCGGGCATCGCGCTATGGTCAGCCG
GGTAAGACGTTCGCGATCGGTCTCGGATGCGAACTGCGCCACGCGCATCGGCTGGTCTACTCCGAGGGATTGGATCTTTC
TGGTGAAAATGCGACACCCATCGGGGCCGGCTGCCGCGTATGCGAGCGGGACAACTGTCCGCAGCGGGCGTTCCCCGCGT
TGGGCCGCGCCCTCGACCTCGACGAGCACCGGTCCACGGTCTCGCCATACCTGGTGAAGCAGTCGTGA

Upstream 100 bases:

>100_bases
CTGCCCGACGCGTTGATGCCAGGCGCCCCGATCCTGCCACAGCCCGGCCCATGCCAAGACTGCGAAGGCCGTTGTTCGCA
GCGTTGTTACGCTGGTTGAC

Downstream 100 bases:

>100_bases
CGCGTATCGCACCCGGCGGATTCCGGGAACTGGGACCCCTGAACTGGGCCATCGCGAAGGCGGGTGCCCGTGCCATCCGC
GCGCCGCGCTTCAGCCTGTT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 474

Protein sequence:

>475_residues
MAKTFVGSRVRQLRNERGYSQAALAQMLEISPSYLNQIEHDVRPLTVAVLLRITEVFGVDATFFASQDDTRLVAELREVA
MDRELGVEVDVSEIADMVAAHPTLARAMVNLHRRYRLTTTQLAAATEDRYSDGTGSSSGSGSISMPHEEVRDYFYQRQNY
LHELDSAAEDLTVRMRMHRGDLAGELSNRLSTVHGVHIVRRIDLGETVLHRFEPGTKTLEMSTHLSVGQQVFKMAAELAY
LEFGDLIDKMVDEGMFTSDESRTLARLGLANYFAAATVLPYRQFHDVAENFRYDVERLSAFYQVSYETIGHRLSTLQRPS
MRGVPFSFVRVDRAGNMSKRQSATGFHFSSSGGTCPLWNVYETFANPGKILVQIAQMPDGRNYMWVARTVERRASRYGQP
GKTFAIGLGCELRHAHRLVYSEGLDLSGENATPIGAGCRVCERDNCPQRAFPALGRALDLDEHRSTVSPYLVKQS

Sequences:

>Translated_475_residues
MAKTFVGSRVRQLRNERGYSQAALAQMLEISPSYLNQIEHDVRPLTVAVLLRITEVFGVDATFFASQDDTRLVAELREVA
MDRELGVEVDVSEIADMVAAHPTLARAMVNLHRRYRLTTTQLAAATEDRYSDGTGSSSGSGSISMPHEEVRDYFYQRQNY
LHELDSAAEDLTVRMRMHRGDLAGELSNRLSTVHGVHIVRRIDLGETVLHRFEPGTKTLEMSTHLSVGQQVFKMAAELAY
LEFGDLIDKMVDEGMFTSDESRTLARLGLANYFAAATVLPYRQFHDVAENFRYDVERLSAFYQVSYETIGHRLSTLQRPS
MRGVPFSFVRVDRAGNMSKRQSATGFHFSSSGGTCPLWNVYETFANPGKILVQIAQMPDGRNYMWVARTVERRASRYGQP
GKTFAIGLGCELRHAHRLVYSEGLDLSGENATPIGAGCRVCERDNCPQRAFPALGRALDLDEHRSTVSPYLVKQS
>Mature_474_residues
AKTFVGSRVRQLRNERGYSQAALAQMLEISPSYLNQIEHDVRPLTVAVLLRITEVFGVDATFFASQDDTRLVAELREVAM
DRELGVEVDVSEIADMVAAHPTLARAMVNLHRRYRLTTTQLAAATEDRYSDGTGSSSGSGSISMPHEEVRDYFYQRQNYL
HELDSAAEDLTVRMRMHRGDLAGELSNRLSTVHGVHIVRRIDLGETVLHRFEPGTKTLEMSTHLSVGQQVFKMAAELAYL
EFGDLIDKMVDEGMFTSDESRTLARLGLANYFAAATVLPYRQFHDVAENFRYDVERLSAFYQVSYETIGHRLSTLQRPSM
RGVPFSFVRVDRAGNMSKRQSATGFHFSSSGGTCPLWNVYETFANPGKILVQIAQMPDGRNYMWVARTVERRASRYGQPG
KTFAIGLGCELRHAHRLVYSEGLDLSGENATPIGAGCRVCERDNCPQRAFPALGRALDLDEHRSTVSPYLVKQS

Specific function: Unknown

COG id: COG3800

COG function: function code R; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018653
- InterPro:   IPR010359
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF09856 DUF2083; PF06114 DUF955; PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 53280; Mature: 53149

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTFVGSRVRQLRNERGYSQAALAQMLEISPSYLNQIEHDVRPLTVAVLLRITEVFGVD
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ATFFASQDDTRLVAELREVAMDRELGVEVDVSEIADMVAAHPTLARAMVNLHRRYRLTTT
EEEECCCCCHHHHHHHHHHHHHHHCCCEECHHHHHHHHHCCHHHHHHHHHHHHHHHCHHH
QLAAATEDRYSDGTGSSSGSGSISMPHEEVRDYFYQRQNYLHELDSAAEDLTVRMRMHRG
HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DLAGELSNRLSTVHGVHIVRRIDLGETVLHRFEPGTKTLEMSTHLSVGQQVFKMAAELAY
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
LEFGDLIDKMVDEGMFTSDESRTLARLGLANYFAAATVLPYRQFHDVAENFRYDVERLSA
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYQVSYETIGHRLSTLQRPSMRGVPFSFVRVDRAGNMSKRQSATGFHFSSSGGTCPLWNV
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHCCCCCCEECCCCCCCCCHHH
YETFANPGKILVQIAQMPDGRNYMWVARTVERRASRYGQPGKTFAIGLGCELRHAHRLVY
HHHHCCCCCEEEEHCCCCCCCCEEEHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHH
SEGLDLSGENATPIGAGCRVCERDNCPQRAFPALGRALDLDEHRSTVSPYLVKQS
HCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHCCCHHHHCCCCCEEEECC
>Mature Secondary Structure 
AKTFVGSRVRQLRNERGYSQAALAQMLEISPSYLNQIEHDVRPLTVAVLLRITEVFGVD
CCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ATFFASQDDTRLVAELREVAMDRELGVEVDVSEIADMVAAHPTLARAMVNLHRRYRLTTT
EEEECCCCCHHHHHHHHHHHHHHHCCCEECHHHHHHHHHCCHHHHHHHHHHHHHHHCHHH
QLAAATEDRYSDGTGSSSGSGSISMPHEEVRDYFYQRQNYLHELDSAAEDLTVRMRMHRG
HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DLAGELSNRLSTVHGVHIVRRIDLGETVLHRFEPGTKTLEMSTHLSVGQQVFKMAAELAY
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHH
LEFGDLIDKMVDEGMFTSDESRTLARLGLANYFAAATVLPYRQFHDVAENFRYDVERLSA
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYQVSYETIGHRLSTLQRPSMRGVPFSFVRVDRAGNMSKRQSATGFHFSSSGGTCPLWNV
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHCCCCCCEECCCCCCCCCHHH
YETFANPGKILVQIAQMPDGRNYMWVARTVERRASRYGQPGKTFAIGLGCELRHAHRLVY
HHHHCCCCCEEEEHCCCCCCCCEEEHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHH
SEGLDLSGENATPIGAGCRVCERDNCPQRAFPALGRALDLDEHRSTVSPYLVKQS
HCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHCCCHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]