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The map label for this gene is ydaM [H]

Identifier: 108797515

GI number: 108797515

Start: 591048

End: 592301

Strand: Reverse

Name: ydaM [H]

Synonym: Mmcs_0535

Alternate gene names: 108797515

Gene position: 592301-591048 (Counterclockwise)

Preceding gene: 108797516

Following gene: 108797514

Centisome position: 10.38

GC content: 64.19

Gene sequence:

>1254_bases
GTGATCACCGGGGTGGTGGCATTCACCTACCTGGTCTCCACCGTCGACCGCAATTACCTGCTGTTCAAAGGCCTTCGGAT
GTCGAGCCTCGTGACCGTGAGCGCCGAGGAGGCAAGGGCGGTCCCCGACGACGACCTCCCCGTCTACACCGTGCTGCTCC
CGGTCTACGACGAACCGACCATCGTGACCAACCTGATCAACGGCGTCGGCAGACTCGACTACCCGCCGGACAAACTGGAG
ATCCTCCTGCTCATCGAGGAGGACGACATCGCCACCCAGGAGGCGCTGTTGGGCGCCGACCTGCAGTCGGCCCGCATCGT
GATCGTGCCGCACAGCCTGCCGAAGACCAAGCCCAAGGCCTGCAATTACGGCATGTCGCTACCCGACCTGCGCGGTGAGT
ATCTGACGATCTACGACGCCGAGGACATCCCCGATCCGCTGCAGCTGCGGCGAGCGGTCGCCGCGTTTCGCCGGTTACCC
GTCGAGATCGGTTGTCTACAGGCGCGATTGGGCTATTTCAACGAACGGCAGAATCTACTCACCAGGTTCTTTTCCCTCGA
GTACGACCAGTGGTTCGGGGTCGTCCTGCCCGCCGTGGAGAACGCCGGGTGTGTGGTGCCCCTCGGAGGGACGTCGAATC
ACATGTCCGTGCGCGTGTGGCGCCAGATCGGCGGGTGGGACGAGTTCAACGTCACCGAGGACGCCGACCTCGGCGTGCGG
TTGGCGCGCCATGGCTACCGAACGCTCATCCTCGACTCGATCACCCTCGAGGAAGCCAATTCCGATGTGGTGAACTGGAT
CCGGCAGCGCTCGCGCTGGTACAAGGGCTATCTGCAGACCATGCTGGTCCATCTGCGCGCACCCGTGCGGCTCCGGCGCG
AACTGGGCACCAAGGGTTTCCTGCGGTTGATCAACATGACCGGCGGCGTGCCGATGACCAGCGCGCTGAACGTGATCTTC
TGGTTCACCCTGTTCGTCTGGGTGCTCGGCAGACCCGACGCGATCGGCCCACTCTTCCCGCCGGTCACCTATTACGTCTG
CCTGCTCCTGCTGCTGATCTGCGCACCCCTGTCGGTGTTCGCCGGGCTCATCGTCACCGCGGCGCTGGGCAAACCGCAGC
TGTGGTGGGCCGCACTGCTGGCACCGCTGTACTGGATGCTGCAGTCCGTCGCCGCCGTCAAGGCCATCTACCAGCTCTTC
GCCCGACCGTCTTTTTGGGAGAAGACCGTTCACGGTCTCTCCCCTTCTGCCTGA

Upstream 100 bases:

>100_bases
GGCGCGCGGCCTGCTCGGGCCACGAGCCCTGGCGGTCGTCACCGCGGTACTCGCCGCGCTCGCGGCGGTCGTCTGGGCGT
GGCCTTCGGTCCTCGCGCCG

Downstream 100 bases:

>100_bases
CTCACCCACACACCGAAGGACGCCGATGAAAGTTCTCACCCGCGCCGTCACCGCAGTCGCCGTCGCCGGCCTCGCGCTGG
GCGTATCGGGTCCGCCTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MITGVVAFTYLVSTVDRNYLLFKGLRMSSLVTVSAEEARAVPDDDLPVYTVLLPVYDEPTIVTNLINGVGRLDYPPDKLE
ILLLIEEDDIATQEALLGADLQSARIVIVPHSLPKTKPKACNYGMSLPDLRGEYLTIYDAEDIPDPLQLRRAVAAFRRLP
VEIGCLQARLGYFNERQNLLTRFFSLEYDQWFGVVLPAVENAGCVVPLGGTSNHMSVRVWRQIGGWDEFNVTEDADLGVR
LARHGYRTLILDSITLEEANSDVVNWIRQRSRWYKGYLQTMLVHLRAPVRLRRELGTKGFLRLINMTGGVPMTSALNVIF
WFTLFVWVLGRPDAIGPLFPPVTYYVCLLLLLICAPLSVFAGLIVTAALGKPQLWWAALLAPLYWMLQSVAAVKAIYQLF
ARPSFWEKTVHGLSPSA

Sequences:

>Translated_417_residues
MITGVVAFTYLVSTVDRNYLLFKGLRMSSLVTVSAEEARAVPDDDLPVYTVLLPVYDEPTIVTNLINGVGRLDYPPDKLE
ILLLIEEDDIATQEALLGADLQSARIVIVPHSLPKTKPKACNYGMSLPDLRGEYLTIYDAEDIPDPLQLRRAVAAFRRLP
VEIGCLQARLGYFNERQNLLTRFFSLEYDQWFGVVLPAVENAGCVVPLGGTSNHMSVRVWRQIGGWDEFNVTEDADLGVR
LARHGYRTLILDSITLEEANSDVVNWIRQRSRWYKGYLQTMLVHLRAPVRLRRELGTKGFLRLINMTGGVPMTSALNVIF
WFTLFVWVLGRPDAIGPLFPPVTYYVCLLLLLICAPLSVFAGLIVTAALGKPQLWWAALLAPLYWMLQSVAAVKAIYQLF
ARPSFWEKTVHGLSPSA
>Mature_417_residues
MITGVVAFTYLVSTVDRNYLLFKGLRMSSLVTVSAEEARAVPDDDLPVYTVLLPVYDEPTIVTNLINGVGRLDYPPDKLE
ILLLIEEDDIATQEALLGADLQSARIVIVPHSLPKTKPKACNYGMSLPDLRGEYLTIYDAEDIPDPLQLRRAVAAFRRLP
VEIGCLQARLGYFNERQNLLTRFFSLEYDQWFGVVLPAVENAGCVVPLGGTSNHMSVRVWRQIGGWDEFNVTEDADLGVR
LARHGYRTLILDSITLEEANSDVVNWIRQRSRWYKGYLQTMLVHLRAPVRLRRELGTKGFLRLINMTGGVPMTSALNVIF
WFTLFVWVLGRPDAIGPLFPPVTYYVCLLLLLICAPLSVFAGLIVTAALGKPQLWWAALLAPLYWMLQSVAAVKAIYQLF
ARPSFWEKTVHGLSPSA

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 46812; Mature: 46812

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITGVVAFTYLVSTVDRNYLLFKGLRMSSLVTVSAEEARAVPDDDLPVYTVLLPVYDEPT
CCHHHHHHHHHHHHHCCCEEEEECCCHHHEEEEEHHHHCCCCCCCCCEEEEEEECCCCCH
IVTNLINGVGRLDYPPDKLEILLLIEEDDIATQEALLGADLQSARIVIVPHSLPKTKPKA
HHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCC
CNYGMSLPDLRGEYLTIYDAEDIPDPLQLRRAVAAFRRLPVEIGCLQARLGYFNERQNLL
CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
TRFFSLEYDQWFGVVLPAVENAGCVVPLGGTSNHMSVRVWRQIGGWDEFNVTEDADLGVR
HHHHHCCHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEHHHCCCCCCCCCCCCCHHHH
LARHGYRTLILDSITLEEANSDVVNWIRQRSRWYKGYLQTMLVHLRAPVRLRRELGTKGF
HHHCCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHH
LRLINMTGGVPMTSALNVIFWFTLFVWVLGRPDAIGPLFPPVTYYVCLLLLLICAPLSVF
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AGLIVTAALGKPQLWWAALLAPLYWMLQSVAAVKAIYQLFARPSFWEKTVHGLSPSA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MITGVVAFTYLVSTVDRNYLLFKGLRMSSLVTVSAEEARAVPDDDLPVYTVLLPVYDEPT
CCHHHHHHHHHHHHHCCCEEEEECCCHHHEEEEEHHHHCCCCCCCCCEEEEEEECCCCCH
IVTNLINGVGRLDYPPDKLEILLLIEEDDIATQEALLGADLQSARIVIVPHSLPKTKPKA
HHHHHHHHCCCCCCCCCCEEEEEEEECCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCC
CNYGMSLPDLRGEYLTIYDAEDIPDPLQLRRAVAAFRRLPVEIGCLQARLGYFNERQNLL
CCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
TRFFSLEYDQWFGVVLPAVENAGCVVPLGGTSNHMSVRVWRQIGGWDEFNVTEDADLGVR
HHHHHCCHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEHHHCCCCCCCCCCCCCHHHH
LARHGYRTLILDSITLEEANSDVVNWIRQRSRWYKGYLQTMLVHLRAPVRLRRELGTKGF
HHHCCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHH
LRLINMTGGVPMTSALNVIFWFTLFVWVLGRPDAIGPLFPPVTYYVCLLLLLICAPLSVF
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
AGLIVTAALGKPQLWWAALLAPLYWMLQSVAAVKAIYQLFARPSFWEKTVHGLSPSA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]