Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is fas1 [H]
Identifier: 108797498
GI number: 108797498
Start: 574144
End: 575364
Strand: Reverse
Name: fas1 [H]
Synonym: Mmcs_0518
Alternate gene names: 108797498
Gene position: 575364-574144 (Counterclockwise)
Preceding gene: 108797499
Following gene: 108797494
Centisome position: 10.08
GC content: 70.43
Gene sequence:
>1221_bases ATGACAGGCACGACTGGAGCATCGACGGCGCCCCCGCTCCCGCCGCTGCACATGCGGCGCACCGGATTCGACCCCACCGA CGAACTGCGCGACATCCGGGAGTCGGCCGGTGTGCGCCTCACCCAGAACGCGTTCGGGATGGACGTGTACCTGGTGACCC GCCATGACGACGTCAAGGCGGTCCTCGCCGACCACACGCGGTTCTCCAACACCCGCCCGCCGGGCTTCGCCGGCGCCGGG TCGCCGATCTCCGATGCCGAACAGGCCAGGGCGCAGGCGGGCAACCTGCTCGCCAACGATCCGCCCGAACATCAGCGGCT GCGGCGGATGCTCACCCCGGAGTTCACGCTGCGCCGGATCAACCGGCTGGAACCGCGGATCGTGGCGATCGTCGACGAAC ACCTCGACGCGATGCAGCAGTCCGGCCCGCCGGCCGATCTGGTGGCCGGCTTCGCGCTGCCCATACCGTCGCTGGTGATC TGCGAACTGCTCGGCGTGCCGTACGCCGACCGGGAGGACTTCCAGCGCCGCAGCGCCCGCCAGCTCGACCTGTCGCTGCC GATCCCGGAGCGGCTCGACCTGGCCCGGCAGGCGCGCGAGTACATGCACACGCTGGTGGGCCGCGCCCGCCGCACCCCGG GTGACGACATCCTCGGCATGCTGGTCCGTGAGCACGGTGACGAGTTGACCGACGACGAACTGGTCGGCATCGCGGGGTTG CTGCTGCTCGCCGGGCACGAGACCACCTCAAACATGCTCGGCCTCGGTGTGCTGGCGCTGCTGCGCCACCCCGAGCAGCT CGCGGCCGTGCGCGACGACCCAGACGCGGTGGGTCCCGCCGTCGAGGAGCTGCTGCGGTGGCTGTCGATCGTGCACAGCG GCATCCCGCGGATCACCACCACCGACGTCGAAGTGGCCGGCGTGCTGATCCCGAAGGGTCAGCTGGTGTTCGTGTCGCTG CCGTCGGCCAACCGGGATCCGAGTTTCCTTGACGCGCCCGAGACCTTCGACATCCGCCGCGGCGCGCCCGGTCACCTCGC GTTCGGCCACGGAGTGCACCACTGCCTCGGGGCGCCGCTGGCCCGCATGGAGATGCGGATCGCGTTCCCCGCGCTGCTGC GCCGGTTCCCCACGCTGACGCTGGCCGAACCGTTCGAAGATGTCGAGTTCCGGTCGTTCCACTTCATCTACGGGCTACGG TCGCTGCTGGTGGGATGGTGA
Upstream 100 bases:
>100_bases CCCGGCCCTGTTCACGTTGATCGGGCCGAAGATCTGGTGGCCCGCGCTGCGCGCATCGCCGTAATCCCGCTCCGCTCCCA CGCGCGTACGTTCGGTAGGT
Downstream 100 bases:
>100_bases TGCGATGAGGATCGAGGCGAACCGCGACGTGTGCATCAGCGCGGGCAACTGCGTGATGTCCGCGCCGGAGGTGTTCGACC AGGACGACGACGGCATCGTC
Product: cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MTGTTGASTAPPLPPLHMRRTGFDPTDELRDIRESAGVRLTQNAFGMDVYLVTRHDDVKAVLADHTRFSNTRPPGFAGAG SPISDAEQARAQAGNLLANDPPEHQRLRRMLTPEFTLRRINRLEPRIVAIVDEHLDAMQQSGPPADLVAGFALPIPSLVI CELLGVPYADREDFQRRSARQLDLSLPIPERLDLARQAREYMHTLVGRARRTPGDDILGMLVREHGDELTDDELVGIAGL LLLAGHETTSNMLGLGVLALLRHPEQLAAVRDDPDAVGPAVEELLRWLSIVHSGIPRITTTDVEVAGVLIPKGQLVFVSL PSANRDPSFLDAPETFDIRRGAPGHLAFGHGVHHCLGAPLARMEMRIAFPALLRRFPTLTLAEPFEDVEFRSFHFIYGLR SLLVGW
Sequences:
>Translated_406_residues MTGTTGASTAPPLPPLHMRRTGFDPTDELRDIRESAGVRLTQNAFGMDVYLVTRHDDVKAVLADHTRFSNTRPPGFAGAG SPISDAEQARAQAGNLLANDPPEHQRLRRMLTPEFTLRRINRLEPRIVAIVDEHLDAMQQSGPPADLVAGFALPIPSLVI CELLGVPYADREDFQRRSARQLDLSLPIPERLDLARQAREYMHTLVGRARRTPGDDILGMLVREHGDELTDDELVGIAGL LLLAGHETTSNMLGLGVLALLRHPEQLAAVRDDPDAVGPAVEELLRWLSIVHSGIPRITTTDVEVAGVLIPKGQLVFVSL PSANRDPSFLDAPETFDIRRGAPGHLAFGHGVHHCLGAPLARMEMRIAFPALLRRFPTLTLAEPFEDVEFRSFHFIYGLR SLLVGW >Mature_405_residues TGTTGASTAPPLPPLHMRRTGFDPTDELRDIRESAGVRLTQNAFGMDVYLVTRHDDVKAVLADHTRFSNTRPPGFAGAGS PISDAEQARAQAGNLLANDPPEHQRLRRMLTPEFTLRRINRLEPRIVAIVDEHLDAMQQSGPPADLVAGFALPIPSLVIC ELLGVPYADREDFQRRSARQLDLSLPIPERLDLARQAREYMHTLVGRARRTPGDDILGMLVREHGDELTDDELVGIAGLL LLAGHETTSNMLGLGVLALLRHPEQLAAVRDDPDAVGPAVEELLRWLSIVHSGIPRITTTDVEVAGVLIPKGQLVFVSLP SANRDPSFLDAPETFDIRRGAPGHLAFGHGVHHCLGAPLARMEMRIAFPALLRRFPTLTLAEPFEDVEFRSFHFIYGLRS LLVGW
Specific function: May be involved in the biosynthesis of cytokinin phytohormones and in host plant fasciation (leafy gall) [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
Organism=Homo sapiens, GI13435386, Length=397, Percent_Identity=25.6926952141058, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI45267826, Length=175, Percent_Identity=33.7142857142857, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI262290932, Length=394, Percent_Identity=24.3654822335025, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI4503231, Length=398, Percent_Identity=22.6130653266332, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI4503219, Length=222, Percent_Identity=28.3783783783784, Blast_Score=76, Evalue=6e-14, Organism=Homo sapiens, GI193083148, Length=383, Percent_Identity=25.3263707571802, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI19743565, Length=215, Percent_Identity=30.6976744186047, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI98991773, Length=204, Percent_Identity=29.9019607843137, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI68509921, Length=177, Percent_Identity=30.5084745762712, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI15147328, Length=253, Percent_Identity=24.5059288537549, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI16933533, Length=390, Percent_Identity=23.3333333333333, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI40805836, Length=177, Percent_Identity=30.5084745762712, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI15147330, Length=253, Percent_Identity=24.5059288537549, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI13699816, Length=221, Percent_Identity=26.6968325791855, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI12383060, Length=395, Percent_Identity=23.5443037974684, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI310125128, Length=213, Percent_Identity=29.5774647887324, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI14550409, Length=213, Percent_Identity=29.5774647887324, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI310125130, Length=213, Percent_Identity=29.5774647887324, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI190570174, Length=213, Percent_Identity=29.5774647887324, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI189339233, Length=198, Percent_Identity=25.7575757575758, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI10834998, Length=240, Percent_Identity=27.5, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI18491008, Length=172, Percent_Identity=27.906976744186, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI7949031, Length=176, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI13699818, Length=184, Percent_Identity=28.2608695652174, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI4503211, Length=188, Percent_Identity=29.2553191489362, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 44674; Mature: 44543
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGTTGASTAPPLPPLHMRRTGFDPTDELRDIRESAGVRLTQNAFGMDVYLVTRHDDVKA CCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCEEECCCCCEEEEEEECCCCHHH VLADHTRFSNTRPPGFAGAGSPISDAEQARAQAGNLLANDPPEHQRLRRMLTPEFTLRRI HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHH NRLEPRIVAIVDEHLDAMQQSGPPADLVAGFALPIPSLVICELLGVPYADREDFQRRSAR HCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHH QLDLSLPIPERLDLARQAREYMHTLVGRARRTPGDDILGMLVREHGDELTDDELVGIAGL HEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHH LLLAGHETTSNMLGLGVLALLRHPEQLAAVRDDPDAVGPAVEELLRWLSIVHSGIPRITT HHHCCCCHHHHHHHHHHHHHHHCHHHHHHHCCCCHHCCHHHHHHHHHHHHHHCCCCCEEE TDVEVAGVLIPKGQLVFVSLPSANRDPSFLDAPETFDIRRGAPGHLAFGHGVHHCLGAPL CCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCH ARMEMRIAFPALLRRFPTLTLAEPFEDVEFRSFHFIYGLRSLLVGW HHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TGTTGASTAPPLPPLHMRRTGFDPTDELRDIRESAGVRLTQNAFGMDVYLVTRHDDVKA CCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCEEECCCCCEEEEEEECCCCHHH VLADHTRFSNTRPPGFAGAGSPISDAEQARAQAGNLLANDPPEHQRLRRMLTPEFTLRRI HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHH NRLEPRIVAIVDEHLDAMQQSGPPADLVAGFALPIPSLVICELLGVPYADREDFQRRSAR HCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHH QLDLSLPIPERLDLARQAREYMHTLVGRARRTPGDDILGMLVREHGDELTDDELVGIAGL HEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHH LLLAGHETTSNMLGLGVLALLRHPEQLAAVRDDPDAVGPAVEELLRWLSIVHSGIPRITT HHHCCCCHHHHHHHHHHHHHHHCHHHHHHHCCCCHHCCHHHHHHHHHHHHHHCCCCCEEE TDVEVAGVLIPKGQLVFVSLPSANRDPSFLDAPETFDIRRGAPGHLAFGHGVHHCLGAPL CCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCH ARMEMRIAFPALLRRFPTLTLAEPFEDVEFRSFHFIYGLRSLLVGW HHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8169198 [H]