Definition Mycobacterium sp. MCS chromosome, complete genome.
Accession NC_008146
Length 5,705,448

Click here to switch to the map view.

The map label for this gene is 108797477

Identifier: 108797477

GI number: 108797477

Start: 553165

End: 554076

Strand: Direct

Name: 108797477

Synonym: Mmcs_0497

Alternate gene names: NA

Gene position: 553165-554076 (Clockwise)

Preceding gene: 108797476

Following gene: 108797478

Centisome position: 9.7

GC content: 71.6

Gene sequence:

>912_bases
GTGAGCGAATCCAGCAGGCCGACCATCGAATTCCCCGCCCGCATCGGTGTCTGGTGGGCCAGTGAGACCTGGTCGATCAC
CGACGCGCAGGACGTCGCCCGGGAGATCGAGGCGCTCGGCTACGGCTCGCTGTTCATCCCCGAGGTGACGGGCAAGGAGT
GCCTGACCCAGTCGGCGGCGTTCCTGTCCGCCACCGACCGGCTCGTGATCGGCACCGGCATCGCGAACATCCACATCCGG
CTGCCCTCGGCTGCGGAGACCGGCGGGCGCACGCTGGGCGCGCTGCACCCGAACCGCTTCGTGCTCGGCCTCGGCGTCAG
CCACGCACCGCTCGTCGAGCACGGGATGGGCGGGACGTACTCGAAACCGCTGGCGACGATGCGCGGTTACCTGGAGAAGA
TGGCGGCGGTGTCGGAGGCGATCGAACCCGGCGCGCCCAGGCCGACCCGGCTGCTCGCCGCGCTCGGCCCCAAGATGATC
GAGCTGTCGGGCACCCACGCCGACGGCGCCCACCCCTACCTCGTCACACCCGAGCAGACCCGCACCACGCGGGACATCCT
CGGGCCCGACAAGTGGATCGTCTCCGAGCAGGCCGTCGCGATCGGCGGCGACGACGCCGACCAGTTGCGCCGCGCGCATC
AGCACCTCGAGGTCTACAGCGGACTGCCGAACTACCGGAACTCGTGGCTGCGCCAGGGATTCGACGAATCCGATCTGGTG
CGCGGCGGTTCGGACCGGTTGGCCCGCGGGATCGTCGGCATGGGGTCGGTCGACGCGGCGGCGGCCTCGGTGACCGCGCA
CCTCGACGCCGGCGCCGACCACGTGGTGCTGCAGGTGCTGGGGGACGACCCGATGGCCGATCCGCGGCCGGCGCTGCGTG
AGCTGGCCGCGGCGCTGGGGCTCAACGGGTAA

Upstream 100 bases:

>100_bases
TGCCCGAGGAACGCGCCGACGAACTCGCCGCCCTGCTGCTGGAGTGGTTCGCCGCCCACCCGATCACCTGAGCCCGCGGC
GGCCCGGTTAGGTTGGGGCG

Downstream 100 bases:

>100_bases
AACCGGTCGGCTGGTTCAATCGCGGATCAGCGGGTGTCGGCCGGGACTACGATCACCCCATTGGGGAGGTCCTGACATGG
CTCATCCATCGATCGATCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MSESSRPTIEFPARIGVWWASETWSITDAQDVAREIEALGYGSLFIPEVTGKECLTQSAAFLSATDRLVIGTGIANIHIR
LPSAAETGGRTLGALHPNRFVLGLGVSHAPLVEHGMGGTYSKPLATMRGYLEKMAAVSEAIEPGAPRPTRLLAALGPKMI
ELSGTHADGAHPYLVTPEQTRTTRDILGPDKWIVSEQAVAIGGDDADQLRRAHQHLEVYSGLPNYRNSWLRQGFDESDLV
RGGSDRLARGIVGMGSVDAAAASVTAHLDAGADHVVLQVLGDDPMADPRPALRELAAALGLNG

Sequences:

>Translated_303_residues
MSESSRPTIEFPARIGVWWASETWSITDAQDVAREIEALGYGSLFIPEVTGKECLTQSAAFLSATDRLVIGTGIANIHIR
LPSAAETGGRTLGALHPNRFVLGLGVSHAPLVEHGMGGTYSKPLATMRGYLEKMAAVSEAIEPGAPRPTRLLAALGPKMI
ELSGTHADGAHPYLVTPEQTRTTRDILGPDKWIVSEQAVAIGGDDADQLRRAHQHLEVYSGLPNYRNSWLRQGFDESDLV
RGGSDRLARGIVGMGSVDAAAASVTAHLDAGADHVVLQVLGDDPMADPRPALRELAAALGLNG
>Mature_302_residues
SESSRPTIEFPARIGVWWASETWSITDAQDVAREIEALGYGSLFIPEVTGKECLTQSAAFLSATDRLVIGTGIANIHIRL
PSAAETGGRTLGALHPNRFVLGLGVSHAPLVEHGMGGTYSKPLATMRGYLEKMAAVSEAIEPGAPRPTRLLAALGPKMIE
LSGTHADGAHPYLVTPEQTRTTRDILGPDKWIVSEQAVAIGGDDADQLRRAHQHLEVYSGLPNYRNSWLRQGFDESDLVR
GGSDRLARGIVGMGSVDAAAASVTAHLDAGADHVVLQVLGDDPMADPRPALRELAAALGLNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32136; Mature: 32004

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESSRPTIEFPARIGVWWASETWSITDAQDVAREIEALGYGSLFIPEVTGKECLTQSAA
CCCCCCCCEEECCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHH
FLSATDRLVIGTGIANIHIRLPSAAETGGRTLGALHPNRFVLGLGVSHAPLVEHGMGGTY
HHHHCCCEEEECCEEEEEEECCCCCCCCCCEEECCCCCCEEEEECCCCCCHHHHCCCCCC
SKPLATMRGYLEKMAAVSEAIEPGAPRPTRLLAALGPKMIELSGTHADGAHPYLVTPEQT
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCEEECCCHH
RTTRDILGPDKWIVSEQAVAIGGDDADQLRRAHQHLEVYSGLPNYRNSWLRQGFDESDLV
HHHHHHCCCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHH
RGGSDRLARGIVGMGSVDAAAASVTAHLDAGADHVVLQVLGDDPMADPRPALRELAAALG
CCCHHHHHHHHCCCCCCHHHHHHHEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHC
LNG
CCC
>Mature Secondary Structure 
SESSRPTIEFPARIGVWWASETWSITDAQDVAREIEALGYGSLFIPEVTGKECLTQSAA
CCCCCCCEEECCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHH
FLSATDRLVIGTGIANIHIRLPSAAETGGRTLGALHPNRFVLGLGVSHAPLVEHGMGGTY
HHHHCCCEEEECCEEEEEEECCCCCCCCCCEEECCCCCCEEEEECCCCCCHHHHCCCCCC
SKPLATMRGYLEKMAAVSEAIEPGAPRPTRLLAALGPKMIELSGTHADGAHPYLVTPEQT
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCEEECCCHH
RTTRDILGPDKWIVSEQAVAIGGDDADQLRRAHQHLEVYSGLPNYRNSWLRQGFDESDLV
HHHHHHCCCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHH
RGGSDRLARGIVGMGSVDAAAASVTAHLDAGADHVVLQVLGDDPMADPRPALRELAAALG
CCCHHHHHHHHCCCCCCHHHHHHHEEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHC
LNG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA