| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797475
Identifier: 108797475
GI number: 108797475
Start: 551019
End: 552287
Strand: Direct
Name: 108797475
Synonym: Mmcs_0495
Alternate gene names: NA
Gene position: 551019-552287 (Clockwise)
Preceding gene: 108797474
Following gene: 108797476
Centisome position: 9.66
GC content: 72.97
Gene sequence:
>1269_bases ATGAGCGCACCCCTGCTGCTGCGCGGAGTCGACCTGGCGGCGTTCGCCGTCGCCCTGGTCGCGAGGCTGCGCGGCGGCGG GGTGGTCGTATCGGCCAGTGGGTCCGCGGAATTCGTGCACGCGATGCGCGCGCTGCGGCCCGGCCGTCGCACCGAGTTGT ACTGGGCCGCCCGGCTGACCCTGGTCAACCGTGCCGACGATCTCGAAACGTTCGACCGCGTCTTCGAGGCGGTGTTCGCC GATGCGGTGCTGGGCCTGGACCCACCCGCGATGAAACACCGGTCCGCCGACCCGGACCCGTCCCGTCCCGTGGCCCGGCC CGGACAGGGTCCGCCGGAGGACGTCGACGGCTTGCCGTGGGTGACCCGGCCGACGAACATCCGCGCGGCCGCCGGATCGG AAGGCACCATCACGCTGCCCGACGTGCTGCCCAGCGGGATGACCGCGCGCGCCGACGAGCCGTTCGACCAGTTCGAGCCC GAGGATCTGCGGTTGCTCGGCCAGTGGCTGGAAGACGCCGCGCCCCACTGGCCGCGCCGCCGGACCCTTCGCCGTCGACC GCACCCTCGCGGCGATCGCATCGACCTCCGTCGGACCGTCCGCGCGTCCCGTGGCACCGGGTGGGAGACCATCCGTCTCA CCCGGACCCGTCGACGGCAGCGGGATCGCCGCATCGTGTTGGTCTGCGACGTCAGTCGCTCCATGCAGGCCTACGCGACG GTCTACCTCCACCTCATGCGGGCGGTGATGATGCGCCGGGACCGCCTGCGGCCCGAGGTGTTCGCGTTCTCCACCTCACT GACCCGGCTGACCCCGGTGCTCTCGCACCGGTCGCCGGAGCTGGCGCTGGCCCGGGCCAATGAGACCGTGGCCGACCGCT ACGGCGGGACGCACGTCGGGCGCAGCATCGGGGAACTGGTGTCGGGTCCCCATGGCGCCGTCCTGCGCGGGGCGGTGGTG ATCATCGCGTCGGACGGGTGGGACAGTGACGCTCCGGAGGTTCTCGTCCATGCGCTGGCCCGGGTTCGCCGCCGGGCGTA CCGCGTGGTGTGGCTGAACCCGCGCGCCGCCCACGTCGACTATCGGCCGCTGGCCGGCTCGATGGCTGCGGCGCTGCCCT TCTGCGACGAGTTCATGCCGGCCCACTCGATCAGCGGGCTCCGGGACCTGTTCGAGGTGCTCGGCGAATCCTCGGCATCT GGTGACCGGCCCCGGGCGGTGGTCCGCGGGCGAAGTCGGCCCGCTGCGCGGCGCCGGATGCCATGCTGA
Upstream 100 bases:
>100_bases AACTCGCCGGCGGCGGAGCCGTCAAGAAGTACGGTCCACCGGCCGTCGGCGCGCTGCTGCTCCTGGTGCTGCTGTTGGTG GCGCTGCGTCGACGGCGGCG
Downstream 100 bases:
>100_bases GCGGTATGGATCAGTACCGGCGCGACGGCCTGGTGTTCGAGGTGCGGGACGAGGGGCCGGCCGACGGCCCGGTTGTGGTG CTGCTGCACGGTTTCCCGCA
Product: VWA containing CoxE-like protein
Products: NA
Alternate protein names: VWA Containing CoxE-Like; VWA Domain Containing CoxE-Like Protein; VWA Containing CoxE-Like Protein; VWA Domain CoxE-Like Family Protein; Carbon Monoxide Dehydrogenase CoxE Subunit; Carbon Monoxide Dehydrogenase E Protein; Von Willebrand Factor Type A Domain-Containing Protein; Carbon Monoxide Dehydrogenase Accessory Protein; CoxE Protein; Vwa Domain Coxe-Like Protein; VWA Domain-Containing CoxE-Like Family Protein
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MSAPLLLRGVDLAAFAVALVARLRGGGVVVSASGSAEFVHAMRALRPGRRTELYWAARLTLVNRADDLETFDRVFEAVFA DAVLGLDPPAMKHRSADPDPSRPVARPGQGPPEDVDGLPWVTRPTNIRAAAGSEGTITLPDVLPSGMTARADEPFDQFEP EDLRLLGQWLEDAAPHWPRRRTLRRRPHPRGDRIDLRRTVRASRGTGWETIRLTRTRRRQRDRRIVLVCDVSRSMQAYAT VYLHLMRAVMMRRDRLRPEVFAFSTSLTRLTPVLSHRSPELALARANETVADRYGGTHVGRSIGELVSGPHGAVLRGAVV IIASDGWDSDAPEVLVHALARVRRRAYRVVWLNPRAAHVDYRPLAGSMAAALPFCDEFMPAHSISGLRDLFEVLGESSAS GDRPRAVVRGRSRPAARRRMPC
Sequences:
>Translated_422_residues MSAPLLLRGVDLAAFAVALVARLRGGGVVVSASGSAEFVHAMRALRPGRRTELYWAARLTLVNRADDLETFDRVFEAVFA DAVLGLDPPAMKHRSADPDPSRPVARPGQGPPEDVDGLPWVTRPTNIRAAAGSEGTITLPDVLPSGMTARADEPFDQFEP EDLRLLGQWLEDAAPHWPRRRTLRRRPHPRGDRIDLRRTVRASRGTGWETIRLTRTRRRQRDRRIVLVCDVSRSMQAYAT VYLHLMRAVMMRRDRLRPEVFAFSTSLTRLTPVLSHRSPELALARANETVADRYGGTHVGRSIGELVSGPHGAVLRGAVV IIASDGWDSDAPEVLVHALARVRRRAYRVVWLNPRAAHVDYRPLAGSMAAALPFCDEFMPAHSISGLRDLFEVLGESSAS GDRPRAVVRGRSRPAARRRMPC >Mature_421_residues SAPLLLRGVDLAAFAVALVARLRGGGVVVSASGSAEFVHAMRALRPGRRTELYWAARLTLVNRADDLETFDRVFEAVFAD AVLGLDPPAMKHRSADPDPSRPVARPGQGPPEDVDGLPWVTRPTNIRAAAGSEGTITLPDVLPSGMTARADEPFDQFEPE DLRLLGQWLEDAAPHWPRRRTLRRRPHPRGDRIDLRRTVRASRGTGWETIRLTRTRRRQRDRRIVLVCDVSRSMQAYATV YLHLMRAVMMRRDRLRPEVFAFSTSLTRLTPVLSHRSPELALARANETVADRYGGTHVGRSIGELVSGPHGAVLRGAVVI IASDGWDSDAPEVLVHALARVRRRAYRVVWLNPRAAHVDYRPLAGSMAAALPFCDEFMPAHSISGLRDLFEVLGESSASG DRPRAVVRGRSRPAARRRMPC
Specific function: Unknown
COG id: COG3552
COG function: function code R; Protein containing von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46792; Mature: 46661
Theoretical pI: Translated: 11.66; Mature: 11.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPLLLRGVDLAAFAVALVARLRGGGVVVSASGSAEFVHAMRALRPGRRTELYWAARLT CCCCCEEECCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCCEEEEEEHHH LVNRADDLETFDRVFEAVFADAVLGLDPPAMKHRSADPDPSRPVARPGQGPPEDVDGLPW HHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC VTRPTNIRAAAGSEGTITLPDVLPSGMTARADEPFDQFEPEDLRLLGQWLEDAAPHWPRR CCCCCCCEEECCCCCCEECHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCHH RTLRRRPHPRGDRIDLRRTVRASRGTGWETIRLTRTRRRQRDRRIVLVCDVSRSMQAYAT HHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEEHHHHHHHCCCEEEEEECCCHHHHHHHH VYLHLMRAVMMRRDRLRPEVFAFSTSLTRLTPVLSHRSPELALARANETVADRYGGTHVG HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCHHHH RSIGELVSGPHGAVLRGAVVIIASDGWDSDAPEVLVHALARVRRRAYRVVWLNPRAAHVD HHHHHHHCCCCCCEEECEEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCC YRPLAGSMAAALPFCDEFMPAHSISGLRDLFEVLGESSASGDRPRAVVRGRSRPAARRRM CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHCCC PC CC >Mature Secondary Structure SAPLLLRGVDLAAFAVALVARLRGGGVVVSASGSAEFVHAMRALRPGRRTELYWAARLT CCCCEEECCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCCEEEEEEHHH LVNRADDLETFDRVFEAVFADAVLGLDPPAMKHRSADPDPSRPVARPGQGPPEDVDGLPW HHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC VTRPTNIRAAAGSEGTITLPDVLPSGMTARADEPFDQFEPEDLRLLGQWLEDAAPHWPRR CCCCCCCEEECCCCCCEECHHHCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCHH RTLRRRPHPRGDRIDLRRTVRASRGTGWETIRLTRTRRRQRDRRIVLVCDVSRSMQAYAT HHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEEHHHHHHHCCCEEEEEECCCHHHHHHHH VYLHLMRAVMMRRDRLRPEVFAFSTSLTRLTPVLSHRSPELALARANETVADRYGGTHVG HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCHHHH RSIGELVSGPHGAVLRGAVVIIASDGWDSDAPEVLVHALARVRRRAYRVVWLNPRAAHVD HHHHHHHCCCCCCEEECEEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCC YRPLAGSMAAALPFCDEFMPAHSISGLRDLFEVLGESSASGDRPRAVVRGRSRPAARRRM CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHCCC PC CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA