| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is dnaJ1 [H]
Identifier: 108797444
GI number: 108797444
Start: 517697
End: 518875
Strand: Direct
Name: dnaJ1 [H]
Synonym: Mmcs_0464
Alternate gene names: 108797444
Gene position: 517697-518875 (Clockwise)
Preceding gene: 108797443
Following gene: 108797445
Centisome position: 9.07
GC content: 70.65
Gene sequence:
>1179_bases ATGGCCCAACGCGAGTGGGTCGAGAAGGACTTCTACAAGGAGCTCGGCGTCTCCTCTGACGCCAGCGCGGACGAGATCAA GAAGGCCTACCGGAAGTTGGCCCGCGATCTCCACCCCGACACGAACCCGGACCCGTCCGCCGCCGAGCGGTTCAAGGCGG TGTCCGAGGCGCACAGCGTGCTGTCGGACGCGGCGAAGCGCAAGGAGTACGACGAAACCCGCCGGCTGTTCGCCGGCGGC GGCTTCGGGCGTGGCCGGTTCAACGGCGGCGGTGGAGGATTCGGCGGTTTCGGCGGCGCCGACGGTGGGGTCGAGTTCAA CCTCAACGACCTCTTCGACGCCGCCGGGCAGACCGGCGGCGCCAACATCGGCGACCTGTTCGGTGGTCTGTTCGGGCGGG GTGCCTCGCCGCGACCCAGCCGGCCCCGGCGCGGTAACGACCTCGAGACCGAGACCGAGCTGTCGTTCCTGGAGGCCACC AAGGGTGTGGCGATGCCGCTGCGGCTGACCAGCCCGGCACCGTGTACGAATTGCCATGGCAGCGGCGCACGTCCGGGCAC CAGCCCGAAGGTGTGCCCGAACTGCAACGGCGCCGGGGTGGTCAACCGCAACCAGGGCGCGTTCGGGTTCTCCGAACCCT GCACCGAGTGCAAGGGCAGCGGCTCGATCATCGAGCACCCCTGCGGCGAGTGCAAAGGCACCGGCGTCACCACCAGGACC CGCACCATCAACGTGCGGATCCCCCCGGGCGTGGAGGACGGTCAGCGGATCCGGTTGGCAGGTCAGGGCGAGGCGGGTCT GCGCGGTGCGCCCTCGGGCGACCTGTACGTGACCGTCCATGTGCGTCCGGACAAGGTGTTCGGCCGCGACGGTGACGACC TCACCGTCTCCGTGCCGGTCAGCTTCCACGAGTTGGCGCTCGGCACAACGCTTTCCGTCCCGACGCTGGAGGGCAAGGTC GGTGTGCGGGTGCCCAAGGGCACCTCCGACGGCCGCATCCTGCGGGTGCGTGGGCGCGGTGTGCCCAAGCGTGGCGGCGG GCACGGCGACCTGCTGGTCACCGTCAAGGTCGCGGTTCCGCCGAACCTCGAGGGTGAAGCCGCCGAGGCGCTGGAGGCCT ACGCCAAGGCCGAGCGCGCGAGCGGATTCGACCCGCGGGCCGGCTGGGCAGGAGCCTGA
Upstream 100 bases:
>100_bases GTGCCCGCGGGCGACACGGCCGAGAACGCCAGCGCGGCGGGGCGCGAGGCCGCAGAATCAGACAACCAGTAACGAGAGAA AGGTGAGGAGGTGACGCGGT
Downstream 100 bases:
>100_bases TCGTGGCGGCCAAACGGAACGAGGAAGCGCGCACCTTCCTGATCTCGGTGGCCGCCGAGCTGGCCGGTATGCACGCGCAG ACCCTGCGCACCTATGACCG
Product: chaperone protein DnaJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MAQREWVEKDFYKELGVSSDASADEIKKAYRKLARDLHPDTNPDPSAAERFKAVSEAHSVLSDAAKRKEYDETRRLFAGG GFGRGRFNGGGGGFGGFGGADGGVEFNLNDLFDAAGQTGGANIGDLFGGLFGRGASPRPSRPRRGNDLETETELSFLEAT KGVAMPLRLTSPAPCTNCHGSGARPGTSPKVCPNCNGAGVVNRNQGAFGFSEPCTECKGSGSIIEHPCGECKGTGVTTRT RTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVSVPVSFHELALGTTLSVPTLEGKV GVRVPKGTSDGRILRVRGRGVPKRGGGHGDLLVTVKVAVPPNLEGEAAEALEAYAKAERASGFDPRAGWAGA
Sequences:
>Translated_392_residues MAQREWVEKDFYKELGVSSDASADEIKKAYRKLARDLHPDTNPDPSAAERFKAVSEAHSVLSDAAKRKEYDETRRLFAGG GFGRGRFNGGGGGFGGFGGADGGVEFNLNDLFDAAGQTGGANIGDLFGGLFGRGASPRPSRPRRGNDLETETELSFLEAT KGVAMPLRLTSPAPCTNCHGSGARPGTSPKVCPNCNGAGVVNRNQGAFGFSEPCTECKGSGSIIEHPCGECKGTGVTTRT RTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVSVPVSFHELALGTTLSVPTLEGKV GVRVPKGTSDGRILRVRGRGVPKRGGGHGDLLVTVKVAVPPNLEGEAAEALEAYAKAERASGFDPRAGWAGA >Mature_391_residues AQREWVEKDFYKELGVSSDASADEIKKAYRKLARDLHPDTNPDPSAAERFKAVSEAHSVLSDAAKRKEYDETRRLFAGGG FGRGRFNGGGGGFGGFGGADGGVEFNLNDLFDAAGQTGGANIGDLFGGLFGRGASPRPSRPRRGNDLETETELSFLEATK GVAMPLRLTSPAPCTNCHGSGARPGTSPKVCPNCNGAGVVNRNQGAFGFSEPCTECKGSGSIIEHPCGECKGTGVTTRTR TINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVSVPVSFHELALGTTLSVPTLEGKVG VRVPKGTSDGRILRVRGRGVPKRGGGHGDLLVTVKVAVPPNLEGEAAEALEAYAKAERASGFDPRAGWAGA
Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon
COG id: COG0484
COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain [H]
Homologues:
Organism=Homo sapiens, GI205360838, Length=374, Percent_Identity=33.4224598930481, Blast_Score=192, Evalue=3e-49, Organism=Homo sapiens, GI205360840, Length=374, Percent_Identity=33.4224598930481, Blast_Score=192, Evalue=5e-49, Organism=Homo sapiens, GI194328760, Length=380, Percent_Identity=30.5263157894737, Blast_Score=143, Evalue=4e-34, Organism=Homo sapiens, GI194328758, Length=380, Percent_Identity=30.5263157894737, Blast_Score=142, Evalue=4e-34, Organism=Homo sapiens, GI4504511, Length=367, Percent_Identity=29.4277929155313, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI7706495, Length=381, Percent_Identity=30.4461942257218, Blast_Score=129, Evalue=6e-30, Organism=Homo sapiens, GI5031741, Length=365, Percent_Identity=29.3150684931507, Blast_Score=126, Evalue=4e-29, Organism=Homo sapiens, GI194328762, Length=343, Percent_Identity=27.6967930029155, Blast_Score=106, Evalue=5e-23, Organism=Homo sapiens, GI5453690, Length=395, Percent_Identity=24.5569620253165, Blast_Score=89, Evalue=8e-18, Organism=Homo sapiens, GI201862587, Length=64, Percent_Identity=57.8125, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI201862518, Length=64, Percent_Identity=57.8125, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI56549115, Length=64, Percent_Identity=57.8125, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI9558755, Length=108, Percent_Identity=39.8148148148148, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI45504382, Length=81, Percent_Identity=45.679012345679, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI194306642, Length=85, Percent_Identity=48.2352941176471, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI194306640, Length=85, Percent_Identity=48.2352941176471, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI39204547, Length=176, Percent_Identity=34.0909090909091, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI6631085, Length=64, Percent_Identity=54.6875, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI72534740, Length=81, Percent_Identity=46.9135802469136, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI29126218, Length=81, Percent_Identity=45.679012345679, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI23503241, Length=64, Percent_Identity=56.25, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI56687498, Length=61, Percent_Identity=52.4590163934426, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI4885495, Length=65, Percent_Identity=55.3846153846154, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI17388799, Length=65, Percent_Identity=55.3846153846154, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI22749377, Length=64, Percent_Identity=54.6875, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI27151736, Length=88, Percent_Identity=48.8636363636364, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI68077168, Length=74, Percent_Identity=51.3513513513513, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI88501736, Length=86, Percent_Identity=48.8372093023256, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI68077166, Length=74, Percent_Identity=51.3513513513513, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI8922563, Length=73, Percent_Identity=47.945205479452, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI47777312, Length=64, Percent_Identity=56.25, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI21361912, Length=66, Percent_Identity=45.4545454545455, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI1786197, Length=369, Percent_Identity=42.0054200542005, Blast_Score=275, Evalue=3e-75, Organism=Escherichia coli, GI1787235, Length=385, Percent_Identity=32.2077922077922, Blast_Score=172, Evalue=4e-44, Organism=Caenorhabditis elegans, GI17553096, Length=378, Percent_Identity=32.010582010582, Blast_Score=188, Evalue=3e-48, Organism=Caenorhabditis elegans, GI17553098, Length=378, Percent_Identity=32.2751322751323, Blast_Score=188, Evalue=4e-48, Organism=Caenorhabditis elegans, GI17507263, Length=388, Percent_Identity=30.1546391752577, Blast_Score=121, Evalue=5e-28, Organism=Caenorhabditis elegans, GI212645553, Length=64, Percent_Identity=57.8125, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17534355, Length=64, Percent_Identity=54.6875, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17554644, Length=135, Percent_Identity=40, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17538236, Length=118, Percent_Identity=41.5254237288136, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17563890, Length=213, Percent_Identity=28.169014084507, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17543226, Length=63, Percent_Identity=53.968253968254, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI115532476, Length=71, Percent_Identity=47.887323943662, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17554900, Length=69, Percent_Identity=47.8260869565217, Blast_Score=64, Evalue=1e-10, Organism=Saccharomyces cerevisiae, GI6324265, Length=365, Percent_Identity=32.8767123287671, Blast_Score=169, Evalue=6e-43, Organism=Saccharomyces cerevisiae, GI6321094, Length=383, Percent_Identity=33.6814621409922, Blast_Score=145, Evalue=9e-36, Organism=Saccharomyces cerevisiae, GI6323870, Length=369, Percent_Identity=30.0813008130081, Blast_Score=120, Evalue=5e-28, Organism=Saccharomyces cerevisiae, GI6323119, Length=400, Percent_Identity=25.5, Blast_Score=109, Evalue=6e-25, Organism=Saccharomyces cerevisiae, GI6324252, Length=443, Percent_Identity=23.4762979683973, Blast_Score=85, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6322194, Length=100, Percent_Identity=47, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6323813, Length=150, Percent_Identity=37.3333333333333, Blast_Score=68, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322388, Length=98, Percent_Identity=39.7959183673469, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI45552813, Length=386, Percent_Identity=33.419689119171, Blast_Score=183, Evalue=1e-46, Organism=Drosophila melanogaster, GI45549272, Length=386, Percent_Identity=33.419689119171, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI45552811, Length=386, Percent_Identity=33.6787564766839, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI24646562, Length=365, Percent_Identity=29.8630136986301, Blast_Score=125, Evalue=6e-29, Organism=Drosophila melanogaster, GI24646560, Length=365, Percent_Identity=29.8630136986301, Blast_Score=125, Evalue=6e-29, Organism=Drosophila melanogaster, GI24646558, Length=365, Percent_Identity=29.8630136986301, Blast_Score=125, Evalue=6e-29, Organism=Drosophila melanogaster, GI24646556, Length=365, Percent_Identity=29.8630136986301, Blast_Score=125, Evalue=6e-29, Organism=Drosophila melanogaster, GI21357547, Length=365, Percent_Identity=29.8630136986301, Blast_Score=125, Evalue=6e-29, Organism=Drosophila melanogaster, GI19920464, Length=369, Percent_Identity=28.7262872628726, Blast_Score=118, Evalue=8e-27, Organism=Drosophila melanogaster, GI28574949, Length=389, Percent_Identity=26.4781491002571, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI20129487, Length=364, Percent_Identity=27.4725274725275, Blast_Score=112, Evalue=6e-25, Organism=Drosophila melanogaster, GI24584014, Length=364, Percent_Identity=27.4725274725275, Blast_Score=112, Evalue=6e-25, Organism=Drosophila melanogaster, GI24658562, Length=402, Percent_Identity=28.1094527363184, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24658555, Length=402, Percent_Identity=28.1094527363184, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI85726398, Length=379, Percent_Identity=26.3852242744063, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI21358273, Length=63, Percent_Identity=60.3174603174603, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24654066, Length=65, Percent_Identity=56.9230769230769, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24654070, Length=65, Percent_Identity=56.9230769230769, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24654068, Length=65, Percent_Identity=56.9230769230769, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24654072, Length=65, Percent_Identity=56.9230769230769, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI161077138, Length=64, Percent_Identity=57.8125, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI17737735, Length=82, Percent_Identity=46.3414634146341, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI28574723, Length=82, Percent_Identity=46.3414634146341, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI24668523, Length=82, Percent_Identity=46.3414634146341, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI18858081, Length=84, Percent_Identity=50, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24641698, Length=122, Percent_Identity=32.7868852459016, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24641696, Length=122, Percent_Identity=32.7868852459016, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI17648033, Length=105, Percent_Identity=42.8571428571429, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24584630, Length=105, Percent_Identity=42.8571428571429, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24668492, Length=64, Percent_Identity=46.875, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI24645889, Length=95, Percent_Identity=34.7368421052632, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012724 - InterPro: IPR002939 - InterPro: IPR001623 - InterPro: IPR018253 - InterPro: IPR008971 - InterPro: IPR015609 - InterPro: IPR003095 - InterPro: IPR001305 [H]
Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]
EC number: NA
Molecular weight: Translated: 40929; Mature: 40798
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2 ; PS00637 DNAJ_CXXCXGXG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQREWVEKDFYKELGVSSDASADEIKKAYRKLARDLHPDTNPDPSAAERFKAVSEAHSV CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LSDAAKRKEYDETRRLFAGGGFGRGRFNGGGGGFGGFGGADGGVEFNLNDLFDAAGQTGG HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHCCCCCC ANIGDLFGGLFGRGASPRPSRPRRGNDLETETELSFLEATKGVAMPLRLTSPAPCTNCHG CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCC SGARPGTSPKVCPNCNGAGVVNRNQGAFGFSEPCTECKGSGSIIEHPCGECKGTGVTTRT CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCHHCCCCCCCCCCCEEEE RTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVSVPV EEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCC SFHELALGTTLSVPTLEGKVGVRVPKGTSDGRILRVRGRGVPKRGGGHGDLLVTVKVAVP CHHHHHHCCEECCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECC PNLEGEAAEALEAYAKAERASGFDPRAGWAGA CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure AQREWVEKDFYKELGVSSDASADEIKKAYRKLARDLHPDTNPDPSAAERFKAVSEAHSV CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH LSDAAKRKEYDETRRLFAGGGFGRGRFNGGGGGFGGFGGADGGVEFNLNDLFDAAGQTGG HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHCCCCCC ANIGDLFGGLFGRGASPRPSRPRRGNDLETETELSFLEATKGVAMPLRLTSPAPCTNCHG CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCC SGARPGTSPKVCPNCNGAGVVNRNQGAFGFSEPCTECKGSGSIIEHPCGECKGTGVTTRT CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHCCCCCCHHCCCCCCCCCCCEEEE RTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVSVPV EEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCC SFHELALGTTLSVPTLEGKVGVRVPKGTSDGRILRVRGRGVPKRGGGHGDLLVTVKVAVP CHHHHHHCCEECCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECC PNLEGEAAEALEAYAKAERASGFDPRAGWAGA CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]