Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797430
Identifier: 108797430
GI number: 108797430
Start: 505521
End: 506039
Strand: Reverse
Name: 108797430
Synonym: Mmcs_0450
Alternate gene names: NA
Gene position: 506039-505521 (Counterclockwise)
Preceding gene: 108797431
Following gene: 108797424
Centisome position: 8.87
GC content: 68.98
Gene sequence:
>519_bases GTGGCGCGACCTCCTGAAGATCCGAATTATTCGGACAACGAGCCGACCCAGTACTCCAACGCCTACAGCGATGAACCGAC GCAGTACGGCGATTACACCGGGGCGTACGACCAGCCGCCGCCGGGGGAGCCGCAGCCGTGGTACCGCAAACCGGGCGCGC TGATCGCCCTCGGTGCGATCGCGGCCCTGCTGGTGGCGGTGATCGTCTGGCTCGTCGTGCAATTGGTCTCGGGCGACGAC TCGGGCGAATCCACGACGACGACCACAACCACCACCACCACGTCGGAAGCACCCTCGGTGGTGCCCCCGCAGACCGTGAC CGAATCGCCGACCGAGACGACGGCGCCGACGGAGACGACGGCGCCGCCCGAGACCACGACCACCACACCCAGCGAGACGA CCACCACGACGACGGCGCCGACCACGACCACCACCTCGCCTGCGGCCACCACGACGGTGGAGACGAGCACCAGCACGGTG ACGATCACGGTGCCGACGCTGGTCCCGCCGGGAGGCTGA
Upstream 100 bases:
>100_bases AGTCGTCGCCGCGAACGACGACCCGCAACCGGCCGCGACTCAACGAGACACGCACGCTTTACCCGCGCCCCTGAGCAAAC GACGCCTACTATCGAAGCCC
Downstream 100 bases:
>100_bases GGGTCGGTCGGCGCCCGCCACCGCGAGGCTGAAACTACGCAGGCAAAGTACGAGAACACACCTGCGTCAGTTCAGCCTCG CGAGAACCGCCTGCGCCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MARPPEDPNYSDNEPTQYSNAYSDEPTQYGDYTGAYDQPPPGEPQPWYRKPGALIALGAIAALLVAVIVWLVVQLVSGDD SGESTTTTTTTTTTSEAPSVVPPQTVTESPTETTAPTETTAPPETTTTTPSETTTTTTAPTTTTTSPAATTTVETSTSTV TITVPTLVPPGG
Sequences:
>Translated_172_residues MARPPEDPNYSDNEPTQYSNAYSDEPTQYGDYTGAYDQPPPGEPQPWYRKPGALIALGAIAALLVAVIVWLVVQLVSGDD SGESTTTTTTTTTTSEAPSVVPPQTVTESPTETTAPTETTAPPETTTTTPSETTTTTTAPTTTTTSPAATTTVETSTSTV TITVPTLVPPGG >Mature_171_residues ARPPEDPNYSDNEPTQYSNAYSDEPTQYGDYTGAYDQPPPGEPQPWYRKPGALIALGAIAALLVAVIVWLVVQLVSGDDS GESTTTTTTTTTTSEAPSVVPPQTVTESPTETTAPTETTAPPETTTTTPSETTTTTTAPTTTTTSPAATTTVETSTSTVT ITVPTLVPPGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17797; Mature: 17666
Theoretical pI: Translated: 3.39; Mature: 3.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPPEDPNYSDNEPTQYSNAYSDEPTQYGDYTGAYDQPPPGEPQPWYRKPGALIALGAI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEHHHHH AALLVAVIVWLVVQLVSGDDSGESTTTTTTTTTTSEAPSVVPPQTVTESPTETTAPTETT HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC APPETTTTTPSETTTTTTAPTTTTTSPAATTTVETSTSTVTITVPTLVPPGG CCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCC >Mature Secondary Structure ARPPEDPNYSDNEPTQYSNAYSDEPTQYGDYTGAYDQPPPGEPQPWYRKPGALIALGAI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEHHHHH AALLVAVIVWLVVQLVSGDDSGESTTTTTTTTTTSEAPSVVPPQTVTESPTETTAPTETT HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC APPETTTTTPSETTTTTTAPTTTTTSPAATTTVETSTSTVTITVPTLVPPGG CCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA