Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797393
Identifier: 108797393
GI number: 108797393
Start: 459810
End: 461093
Strand: Direct
Name: 108797393
Synonym: Mmcs_0413
Alternate gene names: NA
Gene position: 459810-461093 (Clockwise)
Preceding gene: 108797392
Following gene: 108797394
Centisome position: 8.06
GC content: 74.92
Gene sequence:
>1284_bases GTGGACCTAGTACTCGGCGTGTCGGTGACCTCGACGGCGCTTCGCTTCGTGCTCGTCGAAGGCGCGACAGGTGACGGCGC GACCGTCGACAGCGGAACGCTTGCGATGCCGGTTTCCGGCGACAGCCTCGACGCGCTGGTCGGCGCGGTGTCCGGCGAAG GCCCGTACGCCGCGGCGCCCGGACAGCGGCCGCTGGCCGTCGGTGTGACGTGGACCGAGTCCGTCACCGAACAGGCCGCC GGGCTGATGACCGCCCTGACCGCCCGAGGTGTGCGAAACGTCGTCGCTCTCTCGCCTGCGGAGTCCGCCGCCGCGCTGGC CGCCGGACTCGGTGACCTGGCCGCGCAGACCGACGTCGCGGTGTGCGTGGCCGAACCGGATGTCGCGCTGGTCGCGGTCG TCACCGCCGACACCGTGCACGTCGACCAGATCGACCGCGCGGGTGCAGGCGCCCTGGCCCGTCAGGTGCGGGAGACGGCC GACTCGACCGCGGTGTACCCCGAAGCGGTCTATGTCCTGGGCTCGGCCGACGACGTCGACGCGGTGGTGGCCGCGCTCGC CGGTCTGGTCACGGCCCCGGTGCTGTCCGCGGCCGAGGCGGACCTGGCTCTGGCCCGGGGTGCGGCCCTGGCGTCGGCGC AGGGCTCGGTCGGTGTGGACGCCCCGCTGGCGTTGGCTCAGGTGACGGCCGACGCGCCGAGGTCGTGGCTGACCTGGCGA ATCCCCGCACTCACCTCGGTGCTGGTCGCGGCCGTGGTCACGTTCGTGGTGTCGCTGTCGGTCGCGCTCGGCCTGGAGTT GACGCCGCAGATGCGCTCGGACGACGCGGCGACCCGCCAGGTGGCCAGCGCCTCGGATCAGGCGAAGGCCGCCGTCGACG CACCCGCTCCGGAGGCGCTGCCCAAGGCGGCGCCGAAGCCTGCCGCGCCGCCGCCTCCGCCCGAGGCGCCACCGGCGCCG CCACCGGAGGCTGTCACGGTCGTCGACATCGCCCCCGCCGCCCCGGCGCCCGCACCGGAGGTCGCCCCGGTCATCGAACC GGTGTACGCCGCACCCGAGGTGGCTCCGCCGCCGGCGCCGGTCTACGTGCCGCCGGCCCCGCCGGTGTACGTACCGCCCG CACCGGCCTACGTGCCGCCGCCGGCACCCGTGGCCCCGGCGTACACACCGCCGCAGGCGGGATACGTGCCGCCCGTCGCC CCGCAGCAGCCGCGGTTGCGTGACCGGATCATCGAGCGGCTGCCGATCATCAACCGGTTCCACGAACCGCAGTACCCGTA CTAG
Upstream 100 bases:
>100_bases GACTGACCCTGGTCACGGGATCGTTGCCCGGGCGAACTTGAACCGCGCCCGCACAGCGGTATCGTCATCCCGAATTGTGC AACCAGAGCGGGAACGATCA
Downstream 100 bases:
>100_bases GCGTCCTCGCCGCGGTCACGGCGCCGCAGCACCACTGCGGCGACTCCGCACACCAGGGCGATCGCCAGAGCGACGGTCGC GATGGTGAGTCCGGCCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MDLVLGVSVTSTALRFVLVEGATGDGATVDSGTLAMPVSGDSLDALVGAVSGEGPYAAAPGQRPLAVGVTWTESVTEQAA GLMTALTARGVRNVVALSPAESAAALAAGLGDLAAQTDVAVCVAEPDVALVAVVTADTVHVDQIDRAGAGALARQVRETA DSTAVYPEAVYVLGSADDVDAVVAALAGLVTAPVLSAAEADLALARGAALASAQGSVGVDAPLALAQVTADAPRSWLTWR IPALTSVLVAAVVTFVVSLSVALGLELTPQMRSDDAATRQVASASDQAKAAVDAPAPEALPKAAPKPAAPPPPPEAPPAP PPEAVTVVDIAPAAPAPAPEVAPVIEPVYAAPEVAPPPAPVYVPPAPPVYVPPAPAYVPPPAPVAPAYTPPQAGYVPPVA PQQPRLRDRIIERLPIINRFHEPQYPY
Sequences:
>Translated_427_residues MDLVLGVSVTSTALRFVLVEGATGDGATVDSGTLAMPVSGDSLDALVGAVSGEGPYAAAPGQRPLAVGVTWTESVTEQAA GLMTALTARGVRNVVALSPAESAAALAAGLGDLAAQTDVAVCVAEPDVALVAVVTADTVHVDQIDRAGAGALARQVRETA DSTAVYPEAVYVLGSADDVDAVVAALAGLVTAPVLSAAEADLALARGAALASAQGSVGVDAPLALAQVTADAPRSWLTWR IPALTSVLVAAVVTFVVSLSVALGLELTPQMRSDDAATRQVASASDQAKAAVDAPAPEALPKAAPKPAAPPPPPEAPPAP PPEAVTVVDIAPAAPAPAPEVAPVIEPVYAAPEVAPPPAPVYVPPAPPVYVPPAPAYVPPPAPVAPAYTPPQAGYVPPVA PQQPRLRDRIIERLPIINRFHEPQYPY >Mature_427_residues MDLVLGVSVTSTALRFVLVEGATGDGATVDSGTLAMPVSGDSLDALVGAVSGEGPYAAAPGQRPLAVGVTWTESVTEQAA GLMTALTARGVRNVVALSPAESAAALAAGLGDLAAQTDVAVCVAEPDVALVAVVTADTVHVDQIDRAGAGALARQVRETA DSTAVYPEAVYVLGSADDVDAVVAALAGLVTAPVLSAAEADLALARGAALASAQGSVGVDAPLALAQVTADAPRSWLTWR IPALTSVLVAAVVTFVVSLSVALGLELTPQMRSDDAATRQVASASDQAKAAVDAPAPEALPKAAPKPAAPPPPPEAPPAP PPEAVTVVDIAPAAPAPAPEVAPVIEPVYAAPEVAPPPAPVYVPPAPPVYVPPAPAYVPPPAPVAPAYTPPQAGYVPPVA PQQPRLRDRIIERLPIINRFHEPQYPY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42713; Mature: 42713
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLVLGVSVTSTALRFVLVEGATGDGATVDSGTLAMPVSGDSLDALVGAVSGEGPYAAAP CCEEEECHHHHHEEEEEEEECCCCCCCEECCCCEEEECCCCHHHHHHHHHCCCCCCCCCC GQRPLAVGVTWTESVTEQAAGLMTALTARGVRNVVALSPAESAAALAAGLGDLAAQTDVA CCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHCCCEE VCVAEPDVALVAVVTADTVHVDQIDRAGAGALARQVRETADSTAVYPEAVYVLGSADDVD EEEECCCEEEEEEEEECEEEHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHH AVVAALAGLVTAPVLSAAEADLALARGAALASAQGSVGVDAPLALAQVTADAPRSWLTWR HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEEE IPALTSVLVAAVVTFVVSLSVALGLELTPQMRSDDAATRQVASASDQAKAAVDAPAPEAL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCHHH PKAAPKPAAPPPPPEAPPAPPPEAVTVVDIAPAAPAPAPEVAPVIEPVYAAPEVAPPPAP CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCC VYVPPAPPVYVPPAPAYVPPPAPVAPAYTPPQAGYVPPVAPQQPRLRDRIIERLPIINRF EECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC HEPQYPY CCCCCCC >Mature Secondary Structure MDLVLGVSVTSTALRFVLVEGATGDGATVDSGTLAMPVSGDSLDALVGAVSGEGPYAAAP CCEEEECHHHHHEEEEEEEECCCCCCCEECCCCEEEECCCCHHHHHHHHHCCCCCCCCCC GQRPLAVGVTWTESVTEQAAGLMTALTARGVRNVVALSPAESAAALAAGLGDLAAQTDVA CCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHCCCEE VCVAEPDVALVAVVTADTVHVDQIDRAGAGALARQVRETADSTAVYPEAVYVLGSADDVD EEEECCCEEEEEEEEECEEEHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHH AVVAALAGLVTAPVLSAAEADLALARGAALASAQGSVGVDAPLALAQVTADAPRSWLTWR HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEEE IPALTSVLVAAVVTFVVSLSVALGLELTPQMRSDDAATRQVASASDQAKAAVDAPAPEAL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCHHH PKAAPKPAAPPPPPEAPPAPPPEAVTVVDIAPAAPAPAPEVAPVIEPVYAAPEVAPPPAP CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCC VYVPPAPPVYVPPAPAYVPPPAPVAPAYTPPQAGYVPPVAPQQPRLRDRIIERLPIINRF EECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC HEPQYPY CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA