| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is eccB3 [H]
Identifier: 108797351
GI number: 108797351
Start: 413990
End: 415540
Strand: Direct
Name: eccB3 [H]
Synonym: Mmcs_0371
Alternate gene names: 108797351
Gene position: 413990-415540 (Clockwise)
Preceding gene: 108797350
Following gene: 108797352
Centisome position: 7.26
GC content: 71.57
Gene sequence:
>1551_bases ATGACCACACCCGACGACCGCCGGTCGTTCAGCTCGCGGACGCCGGCCAACGAGAACCCCGAACGGATCACCTACCGCCG CGGTTTCGTCACCCGCCACCAGGTGTCCGGATGGCGATTCGTCATGCGCCGCACCGCTTCCGGTGTGGCACTGCACGACA CCAGGATGCTCGTCGACCCGCTTCGCACGCAGTCCCGCGCCGTTCTCACCGGGGCGTTGATCCTCATCACCGGTCTGGCG GGCTGTTTCGTCTTCTCCCTGATCCGTCCCGCCGGTTCGGCGGGCACCGACACGGTGCTGGCCGACCGGTCGACCGCGGC GCTCTACGTGCGCATCGGTGAGCAGCTGCACCCCGTGCTCAACCTCACCTCCGCGCGCCTGATCGCCGGACGGGCGGACA ACCCGACCACCGTCAAGACCAGTGAGATCGACCAGTTCCCCCGCGGCAACCTGGTCGGCATCCCCGGGGCGCCGGAACGC ATGGTGCAGAACGACTCCCGCGACGCCGAGTGGACGGTGTGCGATGCGTCGTCGGGTGCCAACGCGGGTGTGACGGTGCT CGGCGGGCCGGTGGCCTCCGGCGGTGAACGGGCCAGACCGCTCGCCGACGATCAGGCCGTGCTGGTGTCCGGCGACGCGG GCGCGTGGCTGCTGTGGGACGGCAGACGCAGCCCGGTCGACCTCGCCAACCGCGCGGTGACCGACGCGCTCGGCTTCGGT GCGACCCCGACGACACCGCGGCCCATCGCCGCCGGGCTGTTCAACGCCATCCCCGAGGCGCCGCCGCTGGCCGCCCCGCC CATCCCGGATGCCGGTGCGCCGCCGCGGTTCCCGCTGCCGGTCGCCGCGCCCGTCGGGGCGGTCGTCGCCGCGTTCGAGG CCGACAACACGATTCGCTACTACGCCGTGCTGCCCGACGGGCTGCAACCAGTCCCACAGGTGCTCGCCGCCATCCTGCGC AACACCAACTCCTACGGGTTGAACCAGCCGCCGCGTCTCGGCGCCGACGAGGTCTCCCGGCTCCCGGTGTCACAGCTGCT CGACACCGACGCCTACCCCGCCGACCCCGTCACGCTCGTCGACCCGGCCGCCGATCCGCTGACCTGCGCGCATTGGTCGA AAGCTGCTGACGCCGAACAGAGTTCACTCGGCCTGCTGTCGGGGGCGGCGCTGCCGATGCCCGAGGGGATGCGCACCCTC GATCTGGTCGGGGGCGGTAACGGTGTGACGGCGAACCGGGTGGCGCTGACCTCCGGTCGCGGCTACTTCGTCCAGACGGT CGGCCAGGAGCCGGGATCGCCGACCGCCGGATCGCTGTTCTGGGTCAGCGACACCGGTGTGCGCTACGGCATCGAACCGG GTGAGAACGGCCAGACCATCGCGGCGTTGGGCCTCACCGCGGCCCCGGTGCCCGCGCCGTGGTCGGTGCTGGCGCAGTTC GCGGCCGGTCCGACACTGTCCCGCGACGACGCGCTGCTGGCCCACGACGCCCTGACACGCGACCCGAATCCCGCGCGTCT GGAGAACCTCACACTTCAGGAGAATCCATGA
Upstream 100 bases:
>100_bases CCGACGACTTCACCGACGAGGAACTGATGACCATCACCGTCGACGACGTGCGCAAGTCGGCCGAACCTCTGCTGCGCGGC CTCGGGCTGACGGTGTCCGC
Downstream 100 bases:
>100_bases GCCGGCTGATCTTCGAGGCACACCGCCGGGTGCCCCCGCCGGCGACCCGTAAGGGCACGATCACCATCGAACCGCCGCCG GAACTGCCGCGGCTGGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: ESX conserved component B3; Type VII secretion system protein eccB3; T7SS protein eccB3 [H]
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MTTPDDRRSFSSRTPANENPERITYRRGFVTRHQVSGWRFVMRRTASGVALHDTRMLVDPLRTQSRAVLTGALILITGLA GCFVFSLIRPAGSAGTDTVLADRSTAALYVRIGEQLHPVLNLTSARLIAGRADNPTTVKTSEIDQFPRGNLVGIPGAPER MVQNDSRDAEWTVCDASSGANAGVTVLGGPVASGGERARPLADDQAVLVSGDAGAWLLWDGRRSPVDLANRAVTDALGFG ATPTTPRPIAAGLFNAIPEAPPLAAPPIPDAGAPPRFPLPVAAPVGAVVAAFEADNTIRYYAVLPDGLQPVPQVLAAILR NTNSYGLNQPPRLGADEVSRLPVSQLLDTDAYPADPVTLVDPAADPLTCAHWSKAADAEQSSLGLLSGAALPMPEGMRTL DLVGGGNGVTANRVALTSGRGYFVQTVGQEPGSPTAGSLFWVSDTGVRYGIEPGENGQTIAALGLTAAPVPAPWSVLAQF AAGPTLSRDDALLAHDALTRDPNPARLENLTLQENP
Sequences:
>Translated_516_residues MTTPDDRRSFSSRTPANENPERITYRRGFVTRHQVSGWRFVMRRTASGVALHDTRMLVDPLRTQSRAVLTGALILITGLA GCFVFSLIRPAGSAGTDTVLADRSTAALYVRIGEQLHPVLNLTSARLIAGRADNPTTVKTSEIDQFPRGNLVGIPGAPER MVQNDSRDAEWTVCDASSGANAGVTVLGGPVASGGERARPLADDQAVLVSGDAGAWLLWDGRRSPVDLANRAVTDALGFG ATPTTPRPIAAGLFNAIPEAPPLAAPPIPDAGAPPRFPLPVAAPVGAVVAAFEADNTIRYYAVLPDGLQPVPQVLAAILR NTNSYGLNQPPRLGADEVSRLPVSQLLDTDAYPADPVTLVDPAADPLTCAHWSKAADAEQSSLGLLSGAALPMPEGMRTL DLVGGGNGVTANRVALTSGRGYFVQTVGQEPGSPTAGSLFWVSDTGVRYGIEPGENGQTIAALGLTAAPVPAPWSVLAQF AAGPTLSRDDALLAHDALTRDPNPARLENLTLQENP >Mature_515_residues TTPDDRRSFSSRTPANENPERITYRRGFVTRHQVSGWRFVMRRTASGVALHDTRMLVDPLRTQSRAVLTGALILITGLAG CFVFSLIRPAGSAGTDTVLADRSTAALYVRIGEQLHPVLNLTSARLIAGRADNPTTVKTSEIDQFPRGNLVGIPGAPERM VQNDSRDAEWTVCDASSGANAGVTVLGGPVASGGERARPLADDQAVLVSGDAGAWLLWDGRRSPVDLANRAVTDALGFGA TPTTPRPIAAGLFNAIPEAPPLAAPPIPDAGAPPRFPLPVAAPVGAVVAAFEADNTIRYYAVLPDGLQPVPQVLAAILRN TNSYGLNQPPRLGADEVSRLPVSQLLDTDAYPADPVTLVDPAADPLTCAHWSKAADAEQSSLGLLSGAALPMPEGMRTLD LVGGGNGVTANRVALTSGRGYFVQTVGQEPGSPTAGSLFWVSDTGVRYGIEPGENGQTIAALGLTAAPVPAPWSVLAQFA AGPTLSRDDALLAHDALTRDPNPARLENLTLQENP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eccB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007795 [H]
Pfam domain/function: PF05108 DUF690 [H]
EC number: NA
Molecular weight: Translated: 53924; Mature: 53793
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPDDRRSFSSRTPANENPERITYRRGFVTRHQVSGWRFVMRRTASGVALHDTRMLVDP CCCCCHHHHHCCCCCCCCCCCEEEEECCCCEEECCCHHHHHHHHCCCCEEEECCHHHHHH LRTQSRAVLTGALILITGLAGCFVFSLIRPAGSAGTDTVLADRSTAALYVRIGEQLHPVL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEEEECCHHHHHH NLTSARLIAGRADNPTTVKTSEIDQFPRGNLVGIPGAPERMVQNDSRDAEWTVCDASSGA HHCCCEEEECCCCCCCEEEHHHHCCCCCCCEEECCCCCHHHHCCCCCCCEEEEEECCCCC NAGVTVLGGPVASGGERARPLADDQAVLVSGDAGAWLLWDGRRSPVDLANRAVTDALGFG CCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCC ATPTTPRPIAAGLFNAIPEAPPLAAPPIPDAGAPPRFPLPVAAPVGAVVAAFEADNTIRY CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEECCCEEEE YAVLPDGLQPVPQVLAAILRNTNSYGLNQPPRLGADEVSRLPVSQLLDTDAYPADPVTLV EEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHCCCCCCCCCEEEE DPAADPLTCAHWSKAADAEQSSLGLLSGAALPMPEGMRTLDLVGGGNGVTANRVALTSGR CCCCCCCCHHHCCHHCCCCHHHCCEECCCCCCCCCCCEEEEEEECCCCCEECEEEEECCC GYFVQTVGQEPGSPTAGSLFWVSDTGVRYGIEPGENGQTIAALGLTAAPVPAPWSVLAQF CEEEEECCCCCCCCCCCEEEEEECCCEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHH AAGPTLSRDDALLAHDALTRDPNPARLENLTLQENP HCCCCCCCCCCHHHHHHHCCCCCHHHHEEEEECCCC >Mature Secondary Structure TTPDDRRSFSSRTPANENPERITYRRGFVTRHQVSGWRFVMRRTASGVALHDTRMLVDP CCCCHHHHHCCCCCCCCCCCEEEEECCCCEEECCCHHHHHHHHCCCCEEEECCHHHHHH LRTQSRAVLTGALILITGLAGCFVFSLIRPAGSAGTDTVLADRSTAALYVRIGEQLHPVL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEEEECCHHHHHH NLTSARLIAGRADNPTTVKTSEIDQFPRGNLVGIPGAPERMVQNDSRDAEWTVCDASSGA HHCCCEEEECCCCCCCEEEHHHHCCCCCCCEEECCCCCHHHHCCCCCCCEEEEEECCCCC NAGVTVLGGPVASGGERARPLADDQAVLVSGDAGAWLLWDGRRSPVDLANRAVTDALGFG CCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCC ATPTTPRPIAAGLFNAIPEAPPLAAPPIPDAGAPPRFPLPVAAPVGAVVAAFEADNTIRY CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEECCCEEEE YAVLPDGLQPVPQVLAAILRNTNSYGLNQPPRLGADEVSRLPVSQLLDTDAYPADPVTLV EEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHCCCCCCCCCEEEE DPAADPLTCAHWSKAADAEQSSLGLLSGAALPMPEGMRTLDLVGGGNGVTANRVALTSGR CCCCCCCCHHHCCHHCCCCHHHCCEECCCCCCCCCCCEEEEEEECCCCCEECEEEEECCC GYFVQTVGQEPGSPTAGSLFWVSDTGVRYGIEPGENGQTIAALGLTAAPVPAPWSVLAQF CEEEEECCCCCCCCCCCEEEEEECCCEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHH AAGPTLSRDDALLAHDALTRDPNPARLENLTLQENP HCCCCCCCCCCHHHHHHHCCCCCHHHHEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]