| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797329
Identifier: 108797329
GI number: 108797329
Start: 386973
End: 388601
Strand: Direct
Name: 108797329
Synonym: Mmcs_0349
Alternate gene names: NA
Gene position: 386973-388601 (Clockwise)
Preceding gene: 108797323
Following gene: 108797330
Centisome position: 6.78
GC content: 74.09
Gene sequence:
>1629_bases ATGACGATGACCGTGGCCGACGTGATCGGGCTGCCCGTCGTCGCGCGCGGCGAACCCGAGGTGCTCAGCGCGCGCCGCTG GGAGGACCCGATCCGGTGGGTGCACGTCGGCGACGTGGCCGACCTGTCGGCGCTGCTGCAGGGCGGCGAACTGGTGCTGA CCACCGGTGCCGGGCTGGCCGCCGATCCCCGGCGCTACCTGCAGGGGCTCGCCGACGCCGGCGCGGTCGGGGTGGTCGTC GAACTGGGGACGGCGATGACGGCGGTGCCGCAGTGGGTCGTCGCCCATGCCGAACGGCTGGACCTCGCGCTCGTCGCGCT GCACCGGCAGATCAAGTTCGTCGCCGTGACCGAGGTGGTGCACCGGCGGATCGTGGCCGCCCAGTACGACGAGGTGGCGT TCGACCGGCGTGTGCACGAGACGTTCACCGAGCTGAGCATGAAACGCGCGTCCCCGGCCGGGATCGTCGACGCCGCGGCG CGCATCCTCGGCGAACCGGTCGTCCTCGAGGACCTCGCCCACCAGGCGCTGGCCGTCGCTCCCGGCGGCGACGCGGCCGC GACGCTGTTGCAGAACTGGGAGCGGCGGTCCCGGGCGAGCGCCGCCGACGGGGACTGGGCGGTCACCTCGGTCGGACCGC GCGGCGAGGAGTGGGGGCGCCTGATCGTCCCCGCGGCGCCCCCCGACCGGGCCCGCGCCACGATGGTCCTCGAACGGGCG GCGGCGGCGCTGGCCCTGCACCGGATGATCGAGCGCAACCGCAGCGGGCTGCACCAGCAGGCCCAGAGCGGGCTGATCGA CGATGTGGTGGCCGGTCGCATCACCGACGAACGCGAGGCCGCGGCTCGGGCGCACGCCCTCGGACTGCGCAGGTCCGCGC GGTACCTGCCGCTAGTCGTGCGGGTCGACCGCGGGGCGGTCACCATGGATCCCGTTGTGGCGCAACGCCGTAACGTCGAA CTGCTGGACGCCGTCGCGCACACGGTCAACGCCGCGGGCCACACCGCGCTGTGCTCGATCCGCCGCGACGGCGAGATCGG CGCGCTGGTGGCGCTCGACCCCGGGCGCGGCGGCTGGGACCGGGCGCTGACCGCACTCGGCGAACGGGTGCACGCCGAGG TGCGCCGCCGCGACGGCGGTGCCCGTTCCGAGGGCCGCTCGGTGTGCGCGGTGGGTGATCCCGCCGCCGAGATCGTCGAG GCGATCCACGGGCTGGGCGAAGCCGCCCACGTCGGCGAGGTCGCCATCGCCATGCACGGCCACGGCCAGGCGGTCTACCG CGCGTCCGACGTACGCCTGCGCGGTCTGATCGCGCTGTTGCGGGACGATCCGCGGGTGCAGCAGTTCGCCGAGACCGAGT TGCGGGCACTGCTGCTCGACGACGACGAGCGCGTGCCGTCGAACCTGGAGGTGTTGCGCCAGTACCTGCAGGTGGCGGGC AACAAAGCGGCGTTGGCGCAACGGCTGCACATGAGCCGGCCGGCGCTCTACAAACGGTTGGCCGCGATCGGCCGGACCCT CGGCGTCGATCTCGACGACGCGGAGTCCATGACGTCGCTTCACGTGGCCGTGCTGATCCTCGACGCTCAGCGGCGCGCCG CCCCCGCGGTACTCACCCGGGGCGGCTGA
Upstream 100 bases:
>100_bases TGCTGAACCGTGTTCGCCATGCACCGATTGTGCGACGGCCTCCGCGCTGCGGGGCGTTGCAGAGTGTCACTGATTCTCCG CCTGGAGCTACATTGTGTAA
Downstream 100 bases:
>100_bases TGAACCTGGTTTCACTTTCACCCGCTTTGGGCAGCCTGCATCCACGGATGACTCCGGGGACAGACGGCGCCGCGACCGCG GCGCTCGACCATAAGGTGAC
Product: purine catabolism PurC-like protein
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator CdaR; Purine Catabolism PurC Domain-Containing Protein; Transcriptional Regulator PucR Family; PucR Family Transcriptional Regulator; PucR-Like Transcriptional Regulator; CdaR Family Transcriptional Regulator; Transcription Regulator CcdaR; LOW QUALITY PROTEIN CdaR Family Transcriptional Regulator; Purine Catabolism PurC-Like Protein; Fis Family Transcriptional Regulator
Number of amino acids: Translated: 542; Mature: 541
Protein sequence:
>542_residues MTMTVADVIGLPVVARGEPEVLSARRWEDPIRWVHVGDVADLSALLQGGELVLTTGAGLAADPRRYLQGLADAGAVGVVV ELGTAMTAVPQWVVAHAERLDLALVALHRQIKFVAVTEVVHRRIVAAQYDEVAFDRRVHETFTELSMKRASPAGIVDAAA RILGEPVVLEDLAHQALAVAPGGDAAATLLQNWERRSRASAADGDWAVTSVGPRGEEWGRLIVPAAPPDRARATMVLERA AAALALHRMIERNRSGLHQQAQSGLIDDVVAGRITDEREAAARAHALGLRRSARYLPLVVRVDRGAVTMDPVVAQRRNVE LLDAVAHTVNAAGHTALCSIRRDGEIGALVALDPGRGGWDRALTALGERVHAEVRRRDGGARSEGRSVCAVGDPAAEIVE AIHGLGEAAHVGEVAIAMHGHGQAVYRASDVRLRGLIALLRDDPRVQQFAETELRALLLDDDERVPSNLEVLRQYLQVAG NKAALAQRLHMSRPALYKRLAAIGRTLGVDLDDAESMTSLHVAVLILDAQRRAAPAVLTRGG
Sequences:
>Translated_542_residues MTMTVADVIGLPVVARGEPEVLSARRWEDPIRWVHVGDVADLSALLQGGELVLTTGAGLAADPRRYLQGLADAGAVGVVV ELGTAMTAVPQWVVAHAERLDLALVALHRQIKFVAVTEVVHRRIVAAQYDEVAFDRRVHETFTELSMKRASPAGIVDAAA RILGEPVVLEDLAHQALAVAPGGDAAATLLQNWERRSRASAADGDWAVTSVGPRGEEWGRLIVPAAPPDRARATMVLERA AAALALHRMIERNRSGLHQQAQSGLIDDVVAGRITDEREAAARAHALGLRRSARYLPLVVRVDRGAVTMDPVVAQRRNVE LLDAVAHTVNAAGHTALCSIRRDGEIGALVALDPGRGGWDRALTALGERVHAEVRRRDGGARSEGRSVCAVGDPAAEIVE AIHGLGEAAHVGEVAIAMHGHGQAVYRASDVRLRGLIALLRDDPRVQQFAETELRALLLDDDERVPSNLEVLRQYLQVAG NKAALAQRLHMSRPALYKRLAAIGRTLGVDLDDAESMTSLHVAVLILDAQRRAAPAVLTRGG >Mature_541_residues TMTVADVIGLPVVARGEPEVLSARRWEDPIRWVHVGDVADLSALLQGGELVLTTGAGLAADPRRYLQGLADAGAVGVVVE LGTAMTAVPQWVVAHAERLDLALVALHRQIKFVAVTEVVHRRIVAAQYDEVAFDRRVHETFTELSMKRASPAGIVDAAAR ILGEPVVLEDLAHQALAVAPGGDAAATLLQNWERRSRASAADGDWAVTSVGPRGEEWGRLIVPAAPPDRARATMVLERAA AALALHRMIERNRSGLHQQAQSGLIDDVVAGRITDEREAAARAHALGLRRSARYLPLVVRVDRGAVTMDPVVAQRRNVEL LDAVAHTVNAAGHTALCSIRRDGEIGALVALDPGRGGWDRALTALGERVHAEVRRRDGGARSEGRSVCAVGDPAAEIVEA IHGLGEAAHVGEVAIAMHGHGQAVYRASDVRLRGLIALLRDDPRVQQFAETELRALLLDDDERVPSNLEVLRQYLQVAGN KAALAQRLHMSRPALYKRLAAIGRTLGVDLDDAESMTSLHVAVLILDAQRRAAPAVLTRGG
Specific function: Unknown
COG id: COG2508
COG function: function code TQ; Regulator of polyketide synthase expression
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58010; Mature: 57879
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMTVADVIGLPVVARGEPEVLSARRWEDPIRWVHVGDVADLSALLQGGELVLTTGAGLA CCEEHHHHHCCCEEECCCCHHHHHHCCCCCCCEEEECCHHHHHHHHCCCCEEEEECCCCC ADPRRYLQGLADAGAVGVVVELGTAMTAVPQWVVAHAERLDLALVALHRQIKFVAVTEVV CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HRRIVAAQYDEVAFDRRVHETFTELSMKRASPAGIVDAAARILGEPVVLEDLAHQALAVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHEEEC PGGDAAATLLQNWERRSRASAADGDWAVTSVGPRGEEWGRLIVPAAPPDRARATMVLERA CCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHH AAALALHRMIERNRSGLHQQAQSGLIDDVVAGRITDEREAAARAHALGLRRSARYLPLVV HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEE RVDRGAVTMDPVVAQRRNVELLDAVAHTVNAAGHTALCSIRRDGEIGALVALDPGRGGWD EECCCCEEECHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCHH RALTALGERVHAEVRRRDGGARSEGRSVCAVGDPAAEIVEAIHGLGEAAHVGEVAIAMHG HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCHHCCCCEEEEEEC HGQAVYRASDVRLRGLIALLRDDPRVQQFAETELRALLLDDDERVPSNLEVLRQYLQVAG CCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHCC NKAALAQRLHMSRPALYKRLAAIGRTLGVDLDDAESMTSLHVAVLILDAQRRAAPAVLTR CHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHEEEEEEEECHHCCCCCEEEC GG CC >Mature Secondary Structure TMTVADVIGLPVVARGEPEVLSARRWEDPIRWVHVGDVADLSALLQGGELVLTTGAGLA CEEHHHHHCCCEEECCCCHHHHHHCCCCCCCEEEECCHHHHHHHHCCCCEEEEECCCCC ADPRRYLQGLADAGAVGVVVELGTAMTAVPQWVVAHAERLDLALVALHRQIKFVAVTEVV CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HRRIVAAQYDEVAFDRRVHETFTELSMKRASPAGIVDAAARILGEPVVLEDLAHQALAVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHEEEC PGGDAAATLLQNWERRSRASAADGDWAVTSVGPRGEEWGRLIVPAAPPDRARATMVLERA CCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHH AAALALHRMIERNRSGLHQQAQSGLIDDVVAGRITDEREAAARAHALGLRRSARYLPLVV HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEE RVDRGAVTMDPVVAQRRNVELLDAVAHTVNAAGHTALCSIRRDGEIGALVALDPGRGGWD EECCCCEEECHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCHH RALTALGERVHAEVRRRDGGARSEGRSVCAVGDPAAEIVEAIHGLGEAAHVGEVAIAMHG HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCHHCCCCEEEEEEC HGQAVYRASDVRLRGLIALLRDDPRVQQFAETELRALLLDDDERVPSNLEVLRQYLQVAG CCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHCC NKAALAQRLHMSRPALYKRLAAIGRTLGVDLDDAESMTSLHVAVLILDAQRRAAPAVLTR CHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHEEEEEEEECHHCCCCCEEEC GG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA