Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797326
Identifier: 108797326
GI number: 108797326
Start: 381483
End: 383753
Strand: Reverse
Name: 108797326
Synonym: Mmcs_0346
Alternate gene names: NA
Gene position: 383753-381483 (Counterclockwise)
Preceding gene: 108797327
Following gene: 108797325
Centisome position: 6.73
GC content: 67.55
Gene sequence:
>2271_bases ATGTCTGAGGCGCCAGAGACGGACTACGACGACCAGGCCGGGTCGGGCACCGACGATCAGACGAACGAGCCCAGCGAGAT CACCTACGACGAGTACCTGCATCCGGCGCGTCCGCGGGCGCTGCGGTTCCGTCCCCGCGTCAAATCGCCGTTCACCCGCC GCTCGGTGGCCCAGGACGGTCCGGCGCGCGCGGACAACCCGGCGTACGTGTCGTGGCTGCTGTCGCAGTCGATGCTCGCC GACGCCAACGAGATCAGCCAGCAGTTCTCCGGTCAGGGCTCGATGTGGCAGAACCCGTACGCCACACCGAGCCCGCGCGG CGCGGTGGAGACGGCGTCGGTGTGGTTCACCGCCTACCCGTTGTCGTTGATCACCCGGCCCAACGAGTCGTTCCTCAAGG CGCTGGCCGACGACGAGATGTGGAAGGCGTTCGCCGACATCGGTATCGAGGCCATCCACACCGGACCGGTCAAGCGCGCG GGCGGGATCTCGGGGTGGCAGACCACCCCGAGCGTCGACGGCCACTTCGACCGCATCAGCACCGAGATCGACCCGGCCTT CGGCACCGAGGAGGAGTTCCGCAAGATGTGCGGGACGGCCAACTGGTACGGCGGCACGATCATCGACGACATCGTGCCCG GCCACACCGGTAAGGGCGCCGACTTCCGCCTCGCGGAGATGAAGTACGCCGACTATCCGGGGATCTACCACATGGTGGAG GTGGATCCCCGCGACTGGGAACACCTGCCCGCCGTGCCGCCCGGTGTCGACTCGGTCAACATCGACCAGGCCACCGAGGA GTGGCTGGACAAGGCCGGTTACATCATCGGCCGCCTGCAACGGGTGATCTTCTACGCCGAGGGCATCAAGGAGACCAACT GGAGCGTCACCCGGCCGGTGCTCGGCGTCGACGGCGTGGAGCGCCGCTGGGTGTACCTGCACTACTTCAAGGACGGTCAG CCGTCGATCAACTGGCTCGACCCGTCGTTCGCCGGGATGCGCCTCGTGATCGGGGACGCGCTGCATTCGCTCGCCGACCT GGGCACCGGCGGACTTCGTTTGGACGCCAACGGTTTTCTCGGCGCGGAGAAGACCGCGGCCGAGGACAGCACCGCCTGGT CGGAGGGTCATCCGCTGTCCGAGGCGGCCAACCATCTGATCGCCAGCATGGTGCGCAAGGTGGGCGGGTTCACCTTCCAG GAGCTCAACCTCACCATCGACGACATCCGCCAGATCGGCGAAGCGGGCGCGGACCTGTCCTACGACTTCATCAACCGGCC CGCCTACCAGCACGCCCTGGCCACCGCGGACACCGAGTTCCTGCGGCTGACGCTGCGCACCACGCTGGAACTCGGCGTCG ACCCGGCGTCGTTGATTCACGCCCTGCAGAACCACGACGAGTTGACCTACGAACTCGTGCACTGGTCGAACGGACACCGC GACGACATCTACACCTACAAGGGTGAGGAGATCACCGGAGAGGCGCTCGGCGAGACGATCCGCCGGGACCTCAGCGTACG GCTCACCGGCGAGAACGCCCCGTACAACCTGGTTTTCACCACCAACGGGATCGCCTGCACCACCGCGACGGTCATCGCGG CCACCCTCGGCATCACCGATCTGGACGAGATCGACGACGATCCGGTGCGCATCGACCGCATCCGGCGAGCCCATCTGCTG CTGGCGATGTTCAACGCGCTGCAGCCGGGGGTGTTCGCGCTGTCGGGGTGGGACCTGTGCGGCATGCTCACGTTGCCGGC CGGGCAGGTCGGCGAACTCCTGCGCGGCGGCGACACCCGGTGGATCCACCGGGCCGCCCACGATCTGATGGGCGTGAATC CCGGTGCGACACAGTCGTTGGCGGGGATGCCGCGGGGGCGGAGCCTCTACGGGTCGATCCCCGATCAGCTCGACGACGAG ACCAGCTTCCTACGCCAGTTGCAGGCGATCCTGCGGGTGCGTTCGCACTACGGCATCGCGACGAGCCGCCAGGTCGACAT CCCCGAGGTCTCCCACCGCGGCATGCTCGTGCTGGTGCACCAGCTGGCCGACGAGGGCCGCTATCAGTTGACCGTGCTGA ACTTCGCCAACGAGGAGGTCGCCGGAACGGTGCGCTCCGAGGCGCTGCCACCCGGTGCCGAGGTGTCGGACATGTTCACC GGCCACGCCTTCGCCACGGTCGACGACCTGCACAGCTTCACCGTCGAGATGCCCGCGCATCACGGGATGTCCCTGCTGGT CGAGGTCACCGCCGACGACTCCGAGACGTGA
Upstream 100 bases:
>100_bases GGTCGGCACGTGCGCAACGACGCGCCGTTTCGACATCGCGGCAGTGTGGAACTACCTCCCGAAGGTCGAACCACCGGGAA CCAGGTCGTGAAGGGGATGC
Downstream 100 bases:
>100_bases TCGGCTGCTAAGCGGAAAGTGTAAACGGCCCGAATCTCCGGCCGCGCTGACAGACTGAGGCGGATTGCCCTGCGGCACAG ACGGAGATGACAATGCCCGA
Product: trehalose synthase
Products: NA
Alternate protein names: Glycosidase
Number of amino acids: Translated: 756; Mature: 755
Protein sequence:
>756_residues MSEAPETDYDDQAGSGTDDQTNEPSEITYDEYLHPARPRALRFRPRVKSPFTRRSVAQDGPARADNPAYVSWLLSQSMLA DANEISQQFSGQGSMWQNPYATPSPRGAVETASVWFTAYPLSLITRPNESFLKALADDEMWKAFADIGIEAIHTGPVKRA GGISGWQTTPSVDGHFDRISTEIDPAFGTEEEFRKMCGTANWYGGTIIDDIVPGHTGKGADFRLAEMKYADYPGIYHMVE VDPRDWEHLPAVPPGVDSVNIDQATEEWLDKAGYIIGRLQRVIFYAEGIKETNWSVTRPVLGVDGVERRWVYLHYFKDGQ PSINWLDPSFAGMRLVIGDALHSLADLGTGGLRLDANGFLGAEKTAAEDSTAWSEGHPLSEAANHLIASMVRKVGGFTFQ ELNLTIDDIRQIGEAGADLSYDFINRPAYQHALATADTEFLRLTLRTTLELGVDPASLIHALQNHDELTYELVHWSNGHR DDIYTYKGEEITGEALGETIRRDLSVRLTGENAPYNLVFTTNGIACTTATVIAATLGITDLDEIDDDPVRIDRIRRAHLL LAMFNALQPGVFALSGWDLCGMLTLPAGQVGELLRGGDTRWIHRAAHDLMGVNPGATQSLAGMPRGRSLYGSIPDQLDDE TSFLRQLQAILRVRSHYGIATSRQVDIPEVSHRGMLVLVHQLADEGRYQLTVLNFANEEVAGTVRSEALPPGAEVSDMFT GHAFATVDDLHSFTVEMPAHHGMSLLVEVTADDSET
Sequences:
>Translated_756_residues MSEAPETDYDDQAGSGTDDQTNEPSEITYDEYLHPARPRALRFRPRVKSPFTRRSVAQDGPARADNPAYVSWLLSQSMLA DANEISQQFSGQGSMWQNPYATPSPRGAVETASVWFTAYPLSLITRPNESFLKALADDEMWKAFADIGIEAIHTGPVKRA GGISGWQTTPSVDGHFDRISTEIDPAFGTEEEFRKMCGTANWYGGTIIDDIVPGHTGKGADFRLAEMKYADYPGIYHMVE VDPRDWEHLPAVPPGVDSVNIDQATEEWLDKAGYIIGRLQRVIFYAEGIKETNWSVTRPVLGVDGVERRWVYLHYFKDGQ PSINWLDPSFAGMRLVIGDALHSLADLGTGGLRLDANGFLGAEKTAAEDSTAWSEGHPLSEAANHLIASMVRKVGGFTFQ ELNLTIDDIRQIGEAGADLSYDFINRPAYQHALATADTEFLRLTLRTTLELGVDPASLIHALQNHDELTYELVHWSNGHR DDIYTYKGEEITGEALGETIRRDLSVRLTGENAPYNLVFTTNGIACTTATVIAATLGITDLDEIDDDPVRIDRIRRAHLL LAMFNALQPGVFALSGWDLCGMLTLPAGQVGELLRGGDTRWIHRAAHDLMGVNPGATQSLAGMPRGRSLYGSIPDQLDDE TSFLRQLQAILRVRSHYGIATSRQVDIPEVSHRGMLVLVHQLADEGRYQLTVLNFANEEVAGTVRSEALPPGAEVSDMFT GHAFATVDDLHSFTVEMPAHHGMSLLVEVTADDSET >Mature_755_residues SEAPETDYDDQAGSGTDDQTNEPSEITYDEYLHPARPRALRFRPRVKSPFTRRSVAQDGPARADNPAYVSWLLSQSMLAD ANEISQQFSGQGSMWQNPYATPSPRGAVETASVWFTAYPLSLITRPNESFLKALADDEMWKAFADIGIEAIHTGPVKRAG GISGWQTTPSVDGHFDRISTEIDPAFGTEEEFRKMCGTANWYGGTIIDDIVPGHTGKGADFRLAEMKYADYPGIYHMVEV DPRDWEHLPAVPPGVDSVNIDQATEEWLDKAGYIIGRLQRVIFYAEGIKETNWSVTRPVLGVDGVERRWVYLHYFKDGQP SINWLDPSFAGMRLVIGDALHSLADLGTGGLRLDANGFLGAEKTAAEDSTAWSEGHPLSEAANHLIASMVRKVGGFTFQE LNLTIDDIRQIGEAGADLSYDFINRPAYQHALATADTEFLRLTLRTTLELGVDPASLIHALQNHDELTYELVHWSNGHRD DIYTYKGEEITGEALGETIRRDLSVRLTGENAPYNLVFTTNGIACTTATVIAATLGITDLDEIDDDPVRIDRIRRAHLLL AMFNALQPGVFALSGWDLCGMLTLPAGQVGELLRGGDTRWIHRAAHDLMGVNPGATQSLAGMPRGRSLYGSIPDQLDDET SFLRQLQAILRVRSHYGIATSRQVDIPEVSHRGMLVLVHQLADEGRYQLTVLNFANEEVAGTVRSEALPPGAEVSDMFTG HAFATVDDLHSFTVEMPAHHGMSLLVEVTADDSET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83226; Mature: 83095
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEAPETDYDDQAGSGTDDQTNEPSEITYDEYLHPARPRALRFRPRVKSPFTRRSVAQDG CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEECCCCCCCHHHHHHCCCC PARADNPAYVSWLLSQSMLADANEISQQFSGQGSMWQNPYATPSPRGAVETASVWFTAYP CCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEHEEEEEEEC LSLITRPNESFLKALADDEMWKAFADIGIEAIHTGPVKRAGGISGWQTTPSVDGHFDRIS HHEEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHC TEIDPAFGTEEEFRKMCGTANWYGGTIIDDIVPGHTGKGADFRLAEMKYADYPGIYHMVE CCCCCCCCCHHHHHHHHCCCCCCCCEEHHHCCCCCCCCCCCEEEEEEEECCCCCEEEEEE VDPRDWEHLPAVPPGVDSVNIDQATEEWLDKAGYIIGRLQRVIFYAEGIKETNWSVTRPV ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCE LGVDGVERRWVYLHYFKDGQPSINWLDPSFAGMRLVIGDALHSLADLGTGGLRLDANGFL ECCCCCCCEEEEEEEECCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCC GAEKTAAEDSTAWSEGHPLSEAANHLIASMVRKVGGFTFQELNLTIDDIRQIGEAGADLS CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCC YDFINRPAYQHALATADTEFLRLTLRTTLELGVDPASLIHALQNHDELTYELVHWSNGHR HHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEECCCCCC DDIYTYKGEEITGEALGETIRRDLSVRLTGENAPYNLVFTTNGIACTTATVIAATLGITD CCCEEECCCCCCHHHHHHHHHHCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCC LDEIDDDPVRIDRIRRAHLLLAMFNALQPGVFALSGWDLCGMLTLPAGQVGELLRGGDTR HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCHHHHHHHHCCCHH WIHRAAHDLMGVNPGATQSLAGMPRGRSLYGSIPDQLDDETSFLRQLQAILRVRSHYGIA HHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC TSRQVDIPEVSHRGMLVLVHQLADEGRYQLTVLNFANEEVAGTVRSEALPPGAEVSDMFT CCCCCCCCCCCCCCCEEEHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHC GHAFATVDDLHSFTVEMPAHHGMSLLVEVTADDSET CCCEEEHHHHHHEEEECCCCCCCEEEEEEECCCCCC >Mature Secondary Structure SEAPETDYDDQAGSGTDDQTNEPSEITYDEYLHPARPRALRFRPRVKSPFTRRSVAQDG CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEECCCCCCCHHHHHHCCCC PARADNPAYVSWLLSQSMLADANEISQQFSGQGSMWQNPYATPSPRGAVETASVWFTAYP CCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEHEEEEEEEC LSLITRPNESFLKALADDEMWKAFADIGIEAIHTGPVKRAGGISGWQTTPSVDGHFDRIS HHEEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHC TEIDPAFGTEEEFRKMCGTANWYGGTIIDDIVPGHTGKGADFRLAEMKYADYPGIYHMVE CCCCCCCCCHHHHHHHHCCCCCCCCEEHHHCCCCCCCCCCCEEEEEEEECCCCCEEEEEE VDPRDWEHLPAVPPGVDSVNIDQATEEWLDKAGYIIGRLQRVIFYAEGIKETNWSVTRPV ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCE LGVDGVERRWVYLHYFKDGQPSINWLDPSFAGMRLVIGDALHSLADLGTGGLRLDANGFL ECCCCCCCEEEEEEEECCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCC GAEKTAAEDSTAWSEGHPLSEAANHLIASMVRKVGGFTFQELNLTIDDIRQIGEAGADLS CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCC YDFINRPAYQHALATADTEFLRLTLRTTLELGVDPASLIHALQNHDELTYELVHWSNGHR HHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEECCCCCC DDIYTYKGEEITGEALGETIRRDLSVRLTGENAPYNLVFTTNGIACTTATVIAATLGITD CCCEEECCCCCCHHHHHHHHHHCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCC LDEIDDDPVRIDRIRRAHLLLAMFNALQPGVFALSGWDLCGMLTLPAGQVGELLRGGDTR HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCHHHHHHHHCCCHH WIHRAAHDLMGVNPGATQSLAGMPRGRSLYGSIPDQLDDETSFLRQLQAILRVRSHYGIA HHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC TSRQVDIPEVSHRGMLVLVHQLADEGRYQLTVLNFANEEVAGTVRSEALPPGAEVSDMFT CCCCCCCCCCCCCCCEEEHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHC GHAFATVDDLHSFTVEMPAHHGMSLLVEVTADDSET CCCEEEHHHHHHEEEECCCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA