Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797317
Identifier: 108797317
GI number: 108797317
Start: 373837
End: 374526
Strand: Reverse
Name: 108797317
Synonym: Mmcs_0337
Alternate gene names: NA
Gene position: 374526-373837 (Counterclockwise)
Preceding gene: 108797319
Following gene: 108797315
Centisome position: 6.56
GC content: 65.8
Gene sequence:
>690_bases ATGACCACTGGAATCACCGGGCTGCCGCCCGAAGTCGACCAACAGACCTGGCGCGCCGCGCTGGAGGATCTGCGCCGGCG CGAGAAGGCAGCGACCCGCGAACTGGATGCGATAGCCGCACAACGCAGGCGCCTACCCATGGTGCGGATGCCCGACTACA CGCTGATCGGCGCGGAGGGCCCCGTCCGGCTCGCCGACGTGTTCAAGGGGCGGTCGCAGCTGATCACGTACAACCACATG TGGACCGACGGCCAGGAGTGGCAGTGCGGCGGATGCACCGGCTTCACGTCGCAGTTCACCCGACTCGAATTCCTCGACAA CTACGACGCGAGGTTCGTCATCGTCACGAACGGACCCATCGAGGAGGCCCTGGCATACAAGGACAAGGTCGGTAACAAGA TGGAGTGGTACTCGTCGTCGGAGAGTTCGTTCGGCGCCGACGTCGATGCACCGCCCGGCGGTGGGTTCGGCGTGAATGTC TTCCTCCGAGACGGCGATACGGTCTTCCGCACCTGGCACACCAACGGCCGCGGCACCGAACAGCTCAGCCACACGTTCGC GCTGATCGACCTCCTGCCGTGGGGTCGCCAGGAGGAATGGCAGGACTCGCCGGACGGGTGGCCGCAGCGGCCCACCTATT CGGGATGGCTGGACTCACCGGACATCGCGCGTATGTACGGCAGCCACTGA
Upstream 100 bases:
>100_bases CGCGAGCATGTGCCAAGAAATCGAAGCGAGGCGATGACTTTCGCGCGCACACTGAGTCAATACCCGTGAACAACTCGTAC GACCACGACGGGATGACGCG
Downstream 100 bases:
>100_bases GCCTTTCGCCGCTTCATAACCCGTCGTCAGCCAGTACACGGCACGGTCGAGCGTCGGGAGTATCTCGGTGATCGCGATCT CCCCAGTGGAGAAGCGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MTTGITGLPPEVDQQTWRAALEDLRRREKAATRELDAIAAQRRRLPMVRMPDYTLIGAEGPVRLADVFKGRSQLITYNHM WTDGQEWQCGGCTGFTSQFTRLEFLDNYDARFVIVTNGPIEEALAYKDKVGNKMEWYSSSESSFGADVDAPPGGGFGVNV FLRDGDTVFRTWHTNGRGTEQLSHTFALIDLLPWGRQEEWQDSPDGWPQRPTYSGWLDSPDIARMYGSH
Sequences:
>Translated_229_residues MTTGITGLPPEVDQQTWRAALEDLRRREKAATRELDAIAAQRRRLPMVRMPDYTLIGAEGPVRLADVFKGRSQLITYNHM WTDGQEWQCGGCTGFTSQFTRLEFLDNYDARFVIVTNGPIEEALAYKDKVGNKMEWYSSSESSFGADVDAPPGGGFGVNV FLRDGDTVFRTWHTNGRGTEQLSHTFALIDLLPWGRQEEWQDSPDGWPQRPTYSGWLDSPDIARMYGSH >Mature_228_residues TTGITGLPPEVDQQTWRAALEDLRRREKAATRELDAIAAQRRRLPMVRMPDYTLIGAEGPVRLADVFKGRSQLITYNHMW TDGQEWQCGGCTGFTSQFTRLEFLDNYDARFVIVTNGPIEEALAYKDKVGNKMEWYSSSESSFGADVDAPPGGGFGVNVF LRDGDTVFRTWHTNGRGTEQLSHTFALIDLLPWGRQEEWQDSPDGWPQRPTYSGWLDSPDIARMYGSH
Specific function: Unknown
COG id: COG4312
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25928; Mature: 25797
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTGITGLPPEVDQQTWRAALEDLRRREKAATRELDAIAAQRRRLPMVRMPDYTLIGAEG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCC PVRLADVFKGRSQLITYNHMWTDGQEWQCGGCTGFTSQFTRLEFLDNYDARFVIVTNGPI CCHHHHHHCCCCCEEEEEEEECCCCCEECCCCCCCHHHHHHHHHHCCCCEEEEEEECCCH EEALAYKDKVGNKMEWYSSSESSFGADVDAPPGGGFGVNVFLRDGDTVFRTWHTNGRGTE HHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCHH QLSHTFALIDLLPWGRQEEWQDSPDGWPQRPTYSGWLDSPDIARMYGSH HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC >Mature Secondary Structure TTGITGLPPEVDQQTWRAALEDLRRREKAATRELDAIAAQRRRLPMVRMPDYTLIGAEG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCC PVRLADVFKGRSQLITYNHMWTDGQEWQCGGCTGFTSQFTRLEFLDNYDARFVIVTNGPI CCHHHHHHCCCCCEEEEEEEECCCCCEECCCCCCCHHHHHHHHHHCCCCEEEEEEECCCH EEALAYKDKVGNKMEWYSSSESSFGADVDAPPGGGFGVNVFLRDGDTVFRTWHTNGRGTE HHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCHH QLSHTFALIDLLPWGRQEEWQDSPDGWPQRPTYSGWLDSPDIARMYGSH HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA