Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797292
Identifier: 108797292
GI number: 108797292
Start: 350765
End: 351385
Strand: Reverse
Name: 108797292
Synonym: Mmcs_0312
Alternate gene names: NA
Gene position: 351385-350765 (Counterclockwise)
Preceding gene: 108797293
Following gene: 108797289
Centisome position: 6.16
GC content: 66.83
Gene sequence:
>621_bases ATGTATAGCGTCATCCGCCTGCTCGACGTGGACGAGTCGGAGCGCGACGACGTTCTGGACACGTTGCGCCGAAGCACCTT CGGCGCCGAGTGGACGCTCGTCGAACCGACGCTGCCCGGGGTACGCAACGGCGGCGACATCCTCGTGCGGTTGCGGTTCT CCGACCGGCACGCGCGTGCCGACGCCGTGACGAAGCTCGACGAACTGCTGGACCGCAATGCCGTCCGGCACGTCAACGGC GCCACCTACAGCGGCTCATCCACCCCCGGCGCCGACGGGATCGCCACCGTCTATCGGGCATTGCTGCTGCGCGTACGTCC CGGGACCGATGAGGCGACCGTCCGCCGATTCGAGGACGATTTGCGGCTACTCCCCCGCTACGTGCGGACCATCCACTCGT GGCAGCTGAGCCGGGTCGAGGACGCCATCGGCACGTCGACGTGGACGCACGTGTTCGAGCAGGAGTTCACCGATGTCGAC GGGTTGATGGGCCCGTACCTCATGCATCCGATTCACTGGGCGTACGTCGACCGGTGGTTCGATCCGGAGTGTCCGGACAT GATCGTGCGGGATCGGGTGTGCCACAGCTTCTGCCGCAACGACGCGGTGGTGCACGCCTGA
Upstream 100 bases:
>100_bases GACCCTTCGATCGGCGAATGGTGGACCGGGATCGACGAACTCGTCACCGAACGCAGCCGGGAGGTGGCCGCCGATGCCGC CGACGTGGACGGACTCTGCG
Downstream 100 bases:
>100_bases AGCCGCTACAGCCCTGCCGGCCGGATGTTCGGATTCGCCGTCGCCGGCGGCTCCAGCGGCGGCAGGACCGCGCTGCCGTC GAGAGTGTGCACCGGTAACC
Product: stress responsive alpha-beta barrel
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MYSVIRLLDVDESERDDVLDTLRRSTFGAEWTLVEPTLPGVRNGGDILVRLRFSDRHARADAVTKLDELLDRNAVRHVNG ATYSGSSTPGADGIATVYRALLLRVRPGTDEATVRRFEDDLRLLPRYVRTIHSWQLSRVEDAIGTSTWTHVFEQEFTDVD GLMGPYLMHPIHWAYVDRWFDPECPDMIVRDRVCHSFCRNDAVVHA
Sequences:
>Translated_206_residues MYSVIRLLDVDESERDDVLDTLRRSTFGAEWTLVEPTLPGVRNGGDILVRLRFSDRHARADAVTKLDELLDRNAVRHVNG ATYSGSSTPGADGIATVYRALLLRVRPGTDEATVRRFEDDLRLLPRYVRTIHSWQLSRVEDAIGTSTWTHVFEQEFTDVD GLMGPYLMHPIHWAYVDRWFDPECPDMIVRDRVCHSFCRNDAVVHA >Mature_206_residues MYSVIRLLDVDESERDDVLDTLRRSTFGAEWTLVEPTLPGVRNGGDILVRLRFSDRHARADAVTKLDELLDRNAVRHVNG ATYSGSSTPGADGIATVYRALLLRVRPGTDEATVRRFEDDLRLLPRYVRTIHSWQLSRVEDAIGTSTWTHVFEQEFTDVD GLMGPYLMHPIHWAYVDRWFDPECPDMIVRDRVCHSFCRNDAVVHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23597; Mature: 23597
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSVIRLLDVDESERDDVLDTLRRSTFGAEWTLVEPTLPGVRNGGDILVRLRFSDRHARA CCHHEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEECCCHHHH DAVTKLDELLDRNAVRHVNGATYSGSSTPGADGIATVYRALLLRVRPGTDEATVRRFEDD HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH LRLLPRYVRTIHSWQLSRVEDAIGTSTWTHVFEQEFTDVDGLMGPYLMHPIHWAYVDRWF HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DPECPDMIVRDRVCHSFCRNDAVVHA CCCCHHHHHHHHHHHHHHCCCCEECC >Mature Secondary Structure MYSVIRLLDVDESERDDVLDTLRRSTFGAEWTLVEPTLPGVRNGGDILVRLRFSDRHARA CCHHEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEECCCHHHH DAVTKLDELLDRNAVRHVNGATYSGSSTPGADGIATVYRALLLRVRPGTDEATVRRFEDD HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH LRLLPRYVRTIHSWQLSRVEDAIGTSTWTHVFEQEFTDVDGLMGPYLMHPIHWAYVDRWF HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DPECPDMIVRDRVCHSFCRNDAVVHA CCCCHHHHHHHHHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA