Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797255
Identifier: 108797255
GI number: 108797255
Start: 314104
End: 315291
Strand: Direct
Name: 108797255
Synonym: Mmcs_0275
Alternate gene names: NA
Gene position: 314104-315291 (Clockwise)
Preceding gene: 108797254
Following gene: 108797256
Centisome position: 5.51
GC content: 67.42
Gene sequence:
>1188_bases ATGAAGTCGATCTCCGCGCGCAACGTGGCGGGCACGCTGGCCGTGGTGTACATCGCCGCGATCGTCGCGTTGGCGGTCGG ACTGTTCAACGGGTCGTTCACGAGAAGTGCGACGGTGACCGTCGTCTCCGACCGCGTCGGGTTGGTGATGAACCCCGATG CCAAGGTGAAACTGCACGGGGCGCAGGTCGGCAAGGTCGCCGCGATCGAGGCGCTGCCGGACGGCCGGGCCGCCATCCGG CTCGCGATGGATCCTTCCCAACTGGCGATCATCCCGTCCAACGTCCTGGTCAATGTCGGGTCGACGACGGTATTCGGTTC CAAGGCAGTGGAATTGGTGCCGCCGGCCAACCCCTCACCGGACCCGTTGCGCGCCGGTCAGGTGCTCGACGCCGGACACG TGACCGTGGAGATCAACACGGTGTTCGAGCAACTCGTGTCCGTCCTGGCGAAGGTGGAACCCGCCAAGCTCAACGAGACG CTGGGCGCGTTGTCCCAGGGCCTCGCCGGACGGGGCGAGAAGTTCGGCCGAACGCTGGTCGACCTCGACACCCTGCTCGC CGACCTCGACCCCAGCATGGACAACCTCAGCCGCGACATCGCCGTCGCCCCAGGGGTTCTCAACGCCTACGCCGACGCTG CTCCCGATCTGCTCGCCACGGCCGACAATGCGTCGCGGATCAGTGACACGCTGGTGGAACGGCAGAGCGACCTCGATGCT CTGCTGGTCAGCGCCATCGGGCTCGCCGAGGTCGGCAACGACGTCGTGGCGACGAACCGCGGCGCGTTCACCGACGTCAT GCGGCTGCTGGTGCCCACGACGGATCTGACCAACCAGTACCACACCGCACTGAATTGCGGTCTGGCCGGGATGCTGCCGT TGGCCATGGCGCCGCCACCACCGGTTCCCGGTGTGCTGCTGCTGGATTCGTTCGTCCTGGGTACCGAGCGCTACCGGTAC CCCCAGAACCTGCCGAAGGTGGCGGCGCGCGGCGGACCGCAGTGTGTGGGCCTGCCCGACGTGGGCTATGAGACCCGCGC GCCGTACGTCGTCTCCGACATCGACGCCAACCCGGCGCAGTACGGCAACCAGGGCATCCTGCTCAACTCCGAAGGGCTCA AGCAGATGCTGTTCGGACCCCTCGACGGACCGCCGCGCAACACCTCGCAGATCGGCCAGCCGGGATGA
Upstream 100 bases:
>100_bases ACCTCGCTGATCGTCGTCGTGGCGGTCACGCTGCTGGTCTCGCTGTCCGTGTACGGCTCCAACGGCAACTTCAACCTGTC CGGATAGGCGTGGTGTGACG
Downstream 100 bases:
>100_bases GGCGGCTGGGCCCCACGGTGGTCAAGTTCGGGGTGTTCGCCGTGGTGATGGTGCTGTTCACCGCCGCGCTGGTCGCGATC TTCGGCCAGTACCGTGCCGG
Product: virulence factor MCE-like protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family A; Virulence Factor; MCE-Family Protein; Mce Family A; MCE Family Protein; Cell Invasion Protein; Virulence Factor MCE-Like Protein; Mce-Related Protein; MCE-Family
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MKSISARNVAGTLAVVYIAAIVALAVGLFNGSFTRSATVTVVSDRVGLVMNPDAKVKLHGAQVGKVAAIEALPDGRAAIR LAMDPSQLAIIPSNVLVNVGSTTVFGSKAVELVPPANPSPDPLRAGQVLDAGHVTVEINTVFEQLVSVLAKVEPAKLNET LGALSQGLAGRGEKFGRTLVDLDTLLADLDPSMDNLSRDIAVAPGVLNAYADAAPDLLATADNASRISDTLVERQSDLDA LLVSAIGLAEVGNDVVATNRGAFTDVMRLLVPTTDLTNQYHTALNCGLAGMLPLAMAPPPPVPGVLLLDSFVLGTERYRY PQNLPKVAARGGPQCVGLPDVGYETRAPYVVSDIDANPAQYGNQGILLNSEGLKQMLFGPLDGPPRNTSQIGQPG
Sequences:
>Translated_395_residues MKSISARNVAGTLAVVYIAAIVALAVGLFNGSFTRSATVTVVSDRVGLVMNPDAKVKLHGAQVGKVAAIEALPDGRAAIR LAMDPSQLAIIPSNVLVNVGSTTVFGSKAVELVPPANPSPDPLRAGQVLDAGHVTVEINTVFEQLVSVLAKVEPAKLNET LGALSQGLAGRGEKFGRTLVDLDTLLADLDPSMDNLSRDIAVAPGVLNAYADAAPDLLATADNASRISDTLVERQSDLDA LLVSAIGLAEVGNDVVATNRGAFTDVMRLLVPTTDLTNQYHTALNCGLAGMLPLAMAPPPPVPGVLLLDSFVLGTERYRY PQNLPKVAARGGPQCVGLPDVGYETRAPYVVSDIDANPAQYGNQGILLNSEGLKQMLFGPLDGPPRNTSQIGQPG >Mature_395_residues MKSISARNVAGTLAVVYIAAIVALAVGLFNGSFTRSATVTVVSDRVGLVMNPDAKVKLHGAQVGKVAAIEALPDGRAAIR LAMDPSQLAIIPSNVLVNVGSTTVFGSKAVELVPPANPSPDPLRAGQVLDAGHVTVEINTVFEQLVSVLAKVEPAKLNET LGALSQGLAGRGEKFGRTLVDLDTLLADLDPSMDNLSRDIAVAPGVLNAYADAAPDLLATADNASRISDTLVERQSDLDA LLVSAIGLAEVGNDVVATNRGAFTDVMRLLVPTTDLTNQYHTALNCGLAGMLPLAMAPPPPVPGVLLLDSFVLGTERYRY PQNLPKVAARGGPQCVGLPDVGYETRAPYVVSDIDANPAQYGNQGILLNSEGLKQMLFGPLDGPPRNTSQIGQPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41017; Mature: 41017
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSISARNVAGTLAVVYIAAIVALAVGLFNGSFTRSATVTVVSDRVGLVMNPDAKVKLHG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEECCCCEEEECC AQVGKVAAIEALPDGRAAIRLAMDPSQLAIIPSNVLVNVGSTTVFGSKAVELVPPANPSP CCCCCEEEEEECCCCCEEEEEEECCCCEEEECCCEEEECCCEEEECCCCEEEECCCCCCC DPLRAGQVLDAGHVTVEINTVFEQLVSVLAKVEPAKLNETLGALSQGLAGRGEKFGRTLV CCCCCCCEEECCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH DLDTLLADLDPSMDNLSRDIAVAPGVLNAYADAAPDLLATADNASRISDTLVERQSDLDA HHHHHHHHCCCCHHHHCCCCEECCHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHH LLVSAIGLAEVGNDVVATNRGAFTDVMRLLVPTTDLTNQYHTALNCGLAGMLPLAMAPPP HHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHCCCCCC PVPGVLLLDSFVLGTERYRYPQNLPKVAARGGPQCVGLPDVGYETRAPYVVSDIDANPAQ CCCHHHHHHHHHHCCHHHCCCCCCHHHHHCCCCCEECCCCCCCCCCCCEEEEECCCCHHH YGNQGILLNSEGLKQMLFGPLDGPPRNTSQIGQPG HCCCEEEECCCCHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKSISARNVAGTLAVVYIAAIVALAVGLFNGSFTRSATVTVVSDRVGLVMNPDAKVKLHG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEECCCCEEEECC AQVGKVAAIEALPDGRAAIRLAMDPSQLAIIPSNVLVNVGSTTVFGSKAVELVPPANPSP CCCCCEEEEEECCCCCEEEEEEECCCCEEEECCCEEEECCCEEEECCCCEEEECCCCCCC DPLRAGQVLDAGHVTVEINTVFEQLVSVLAKVEPAKLNETLGALSQGLAGRGEKFGRTLV CCCCCCCEEECCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHH DLDTLLADLDPSMDNLSRDIAVAPGVLNAYADAAPDLLATADNASRISDTLVERQSDLDA HHHHHHHHCCCCHHHHCCCCEECCHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHH LLVSAIGLAEVGNDVVATNRGAFTDVMRLLVPTTDLTNQYHTALNCGLAGMLPLAMAPPP HHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHCCCCCC PVPGVLLLDSFVLGTERYRYPQNLPKVAARGGPQCVGLPDVGYETRAPYVVSDIDANPAQ CCCHHHHHHHHHHCCHHHCCCCCCHHHHHCCCCCEECCCCCCCCCCCCEEEEECCCCHHH YGNQGILLNSEGLKQMLFGPLDGPPRNTSQIGQPG HCCCEEEECCCCHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA