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The map label for this gene is yrbE [C]

Identifier: 108797253

GI number: 108797253

Start: 312459

End: 313229

Strand: Direct

Name: yrbE [C]

Synonym: Mmcs_0273

Alternate gene names: 108797253

Gene position: 312459-313229 (Clockwise)

Preceding gene: 108797241

Following gene: 108797254

Centisome position: 5.48

GC content: 67.7

Gene sequence:

>771_bases
GTGAACCGGGCAGATCTGGATCGGCCGCTGGGCGCGGTCGGCGGGCTGTTCGGGATGGCCCTCGATGCGGTTCGGTTCAC
CTTCCGGCGGCCCTTTCAGGCCCGGGAGTTCCTCGAGCAGTCGTGGTTCGTGGCACGGGTCTCCCTGGCGCCCACCCTTC
TGGTCGCGATCCCGTTCACCGTGCTGGTGAGCTTCACGCTGAACATCCTCCTGCGCGAACTCGGCGCCGCCGATCTGTCG
GGTGCGGGCGCGGCCTTCGGTGCGGTCACCCAGGTCGGCCCGCTGGTGACGGTGTTGATCGTGGCCGGCGCGGGCGCCAC
CGCGATGTGTGCCGACCTCGGTTCGCGCACCATCCGCGAGGAGATCGAGGCGATGGAGGTGCTGGGCATCAATCCCGTTG
CGCGCCTGGTGACTCCGCGGATGCTGGCGTCCGGCTTGGTGGCGTTGCTGCTCAACAGCCTGGTCGTCATCATCGGCATC
GTCGGCGGCTACGCGTTCTCGGTGTTCGTGCAGGACGTCAACCCCGGTGCGTTCGCCGCGGGTATCACCCTGCTGACCGG
GATCGGTGAGGTGATCATCTCGTGCGTCAAGGCCGCACTGTTCGGGCTGATCGCCGGACTGGTCGCCTGCTACCGCGGAC
TGTCGATCAACAGGGGCGGCGCCAAGGCCGTGGGCAACGCGGTCAACGAGACCGTGGTGTACGCCTTCATGGCACTGTTC
GTCATCAACGTGGTCGTGACCGCGATCGGCATCCGGATGACGGCGGGCTAG

Upstream 100 bases:

>100_bases
TTATCCCGATGGGCGGGACGGGAGATGTGCCCCCGCTCACCCGGATGCCACTGTTGCCCCTCGAGCCACCGCCTGCGGTG
GTAGGTAAGGAGGAGCGTTG

Downstream 100 bases:

>100_bases
CGGATGGGCACACTCACCACGCTGGGCACGGCCTATCCGCGCGTGGTCAGCCAGTTCCGAAAGCCGGCCTCGCTGGTGGG
CCGCCTCGGCGACCACATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MNRADLDRPLGAVGGLFGMALDAVRFTFRRPFQAREFLEQSWFVARVSLAPTLLVAIPFTVLVSFTLNILLRELGAADLS
GAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIEAMEVLGINPVARLVTPRMLASGLVALLLNSLVVIIGI
VGGYAFSVFVQDVNPGAFAAGITLLTGIGEVIISCVKAALFGLIAGLVACYRGLSINRGGAKAVGNAVNETVVYAFMALF
VINVVVTAIGIRMTAG

Sequences:

>Translated_256_residues
MNRADLDRPLGAVGGLFGMALDAVRFTFRRPFQAREFLEQSWFVARVSLAPTLLVAIPFTVLVSFTLNILLRELGAADLS
GAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIEAMEVLGINPVARLVTPRMLASGLVALLLNSLVVIIGI
VGGYAFSVFVQDVNPGAFAAGITLLTGIGEVIISCVKAALFGLIAGLVACYRGLSINRGGAKAVGNAVNETVVYAFMALF
VINVVVTAIGIRMTAG
>Mature_256_residues
MNRADLDRPLGAVGGLFGMALDAVRFTFRRPFQAREFLEQSWFVARVSLAPTLLVAIPFTVLVSFTLNILLRELGAADLS
GAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIREEIEAMEVLGINPVARLVTPRMLASGLVALLLNSLVVIIGI
VGGYAFSVFVQDVNPGAFAAGITLLTGIGEVIISCVKAALFGLIAGLVACYRGLSINRGGAKAVGNAVNETVVYAFMALF
VINVVVTAIGIRMTAG

Specific function: Could be part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=167, Percent_Identity=25.748502994012, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 26469; Mature: 26469

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRADLDRPLGAVGGLFGMALDAVRFTFRRPFQAREFLEQSWFVARVSLAPTLLVAIPFT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLVSFTLNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIRE
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
EIEAMEVLGINPVARLVTPRMLASGLVALLLNSLVVIIGIVGGYAFSVFVQDVNPGAFAA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
GITLLTGIGEVIISCVKAALFGLIAGLVACYRGLSINRGGAKAVGNAVNETVVYAFMALF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VINVVVTAIGIRMTAG
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNRADLDRPLGAVGGLFGMALDAVRFTFRRPFQAREFLEQSWFVARVSLAPTLLVAIPFT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLVSFTLNILLRELGAADLSGAGAAFGAVTQVGPLVTVLIVAGAGATAMCADLGSRTIRE
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
EIEAMEVLGINPVARLVTPRMLASGLVALLLNSLVVIIGIVGGYAFSVFVQDVNPGAFAA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
GITLLTGIGEVIISCVKAALFGLIAGLVACYRGLSINRGGAKAVGNAVNETVVYAFMALF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VINVVVTAIGIRMTAG
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]