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The map label for this gene is sirB [H]

Identifier: 108797242

GI number: 108797242

Start: 302075

End: 302770

Strand: Reverse

Name: sirB [H]

Synonym: Mmcs_0262

Alternate gene names: 108797242

Gene position: 302770-302075 (Counterclockwise)

Preceding gene: 108797243

Following gene: 108797240

Centisome position: 5.31

GC content: 74.71

Gene sequence:

>696_bases
GTGAGCGCCCCGGCCAACCGGATCCTGGTCGCGCACGGCACCCGCAAGTCCAGCGGTGTGGCGCTGATCGGTGACATCGC
CGACCGGGTCGCCGCCACCCTCGGATCGCCGGTCGGCGTCGCCTTCGTCGATGTGCTGGGCCCGACCCCGTCCGACGTAC
TGTCCGCGCTACCCGATCGCCCGGCCGTCCTGGTACCCGCGTTCCTGTCCAGGGGCTACCACGTGCGCAGCGATATCCCG
GCGCATGTGGCGGCCAGCGGCCACCCGGATGTGACGGTCGCCGACGCACTGGGCCCTGACGCGCAGCTGGTACGGGTGGT
GGGCGACCGGCTCATCGAATCCGGCTGGGCGCCTGGCGATTCCGTCATCCTCGCCGCGGCGGGCACCTCGGACCCGCTGG
CGCTGCGCGATCTGCACACCACCGCAGCGTCGCTGTCGGCGGTCACCGGTGCCCGGGTCGACCTGGCGTTCGCCGCCACG
GGCCGACCCCGCGTCGACGAGGCGGTCGCTGCGGCGCGCCGCAGCGGCGCCCGGCGGGTCGTGGTGGCGTCGTACCTGTT
GGCCGACGGCCTGTTCCAGGACCGGCTGCGGGCCAGCGGCGCCGACATCGTCACCGCCCCGCTGGGCACCCACCCGGGAC
TGGTGCGGCTGATCGCGAGCCGGTTCCGGCGGGCGCGGATCCCGATCGCGGCGTAA

Upstream 100 bases:

>100_bases
TGCTGCGGCTGCGAACCGCGTTGGGCGACAAGCAGATCGTCTCCACGGTCGTCAAACGCGGATACCGGCTCACCGTCGAC
GACGATCTGGCGGAGGCCCT

Downstream 100 bases:

>100_bases
CGGTCAGTTGCGGCCCGACGGACCGTCGGCGGCCACCACCTGCCGGGCGACCGCCTCGATCGAATCGTTCTGCTGTTTGG
CCAGTTTCACCAGCAGCGCG

Product: cobalamin (vitamin B12) biosynthesis CbiX protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MSAPANRILVAHGTRKSSGVALIGDIADRVAATLGSPVGVAFVDVLGPTPSDVLSALPDRPAVLVPAFLSRGYHVRSDIP
AHVAASGHPDVTVADALGPDAQLVRVVGDRLIESGWAPGDSVILAAAGTSDPLALRDLHTTAASLSAVTGARVDLAFAAT
GRPRVDEAVAAARRSGARRVVVASYLLADGLFQDRLRASGADIVTAPLGTHPGLVRLIASRFRRARIPIAA

Sequences:

>Translated_231_residues
MSAPANRILVAHGTRKSSGVALIGDIADRVAATLGSPVGVAFVDVLGPTPSDVLSALPDRPAVLVPAFLSRGYHVRSDIP
AHVAASGHPDVTVADALGPDAQLVRVVGDRLIESGWAPGDSVILAAAGTSDPLALRDLHTTAASLSAVTGARVDLAFAAT
GRPRVDEAVAAARRSGARRVVVASYLLADGLFQDRLRASGADIVTAPLGTHPGLVRLIASRFRRARIPIAA
>Mature_230_residues
SAPANRILVAHGTRKSSGVALIGDIADRVAATLGSPVGVAFVDVLGPTPSDVLSALPDRPAVLVPAFLSRGYHVRSDIPA
HVAASGHPDVTVADALGPDAQLVRVVGDRLIESGWAPGDSVILAAAGTSDPLALRDLHTTAASLSAVTGARVDLAFAATG
RPRVDEAVAAARRSGARRVVVASYLLADGLFQDRLRASGADIVTAPLGTHPGLVRLIASRFRRARIPIAA

Specific function: Chelates iron to the siroheme precursor [H]

COG id: COG2138

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiX family. SirB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002762 [H]

Pfam domain/function: PF01903 CbiX [H]

EC number: =4.99.1.4 [H]

Molecular weight: Translated: 23596; Mature: 23465

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPANRILVAHGTRKSSGVALIGDIADRVAATLGSPVGVAFVDVLGPTPSDVLSALPDR
CCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCCC
PAVLVPAFLSRGYHVRSDIPAHVAASGHPDVTVADALGPDAQLVRVVGDRLIESGWAPGD
CCEEHHHHHHCCEEECCCCCCEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCC
SVILAAAGTSDPLALRDLHTTAASLSAVTGARVDLAFAATGRPRVDEAVAAARRSGARRV
CEEEEECCCCCCEEHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCH
VVASYLLADGLFQDRLRASGADIVTAPLGTHPGLVRLIASRFRRARIPIAA
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SAPANRILVAHGTRKSSGVALIGDIADRVAATLGSPVGVAFVDVLGPTPSDVLSALPDR
CCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHCCCC
PAVLVPAFLSRGYHVRSDIPAHVAASGHPDVTVADALGPDAQLVRVVGDRLIESGWAPGD
CCEEHHHHHHCCEEECCCCCCEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCC
SVILAAAGTSDPLALRDLHTTAASLSAVTGARVDLAFAATGRPRVDEAVAAARRSGARRV
CEEEEECCCCCCEEHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCH
VVASYLLADGLFQDRLRASGADIVTAPLGTHPGLVRLIASRFRRARIPIAA
HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA