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The map label for this gene is yfdE [C]

Identifier: 108797164

GI number: 108797164

Start: 203703

End: 204809

Strand: Direct

Name: yfdE [C]

Synonym: Mmcs_0184

Alternate gene names: 108797164

Gene position: 203703-204809 (Clockwise)

Preceding gene: 108797163

Following gene: 108797165

Centisome position: 3.57

GC content: 73.89

Gene sequence:

>1107_bases
GTGGTGTCAGCGTTCGCGATCCCGGCCGCCGTGCTCACGCATGCCGGACGCGTCGCCGCGGGCCTGCCCGTCGGCGTCGA
CATCCCCGAACTCCTGACGGGCCGTGCCGCGCTGCTCGACCTGCCCGCGCCGGGCCGGGTGTCGGCGGGCGGTGCGTCAC
AGCTGTTGCGGGCGCGCGACGGGTGGTGCGCGCTGACCCTGTCCCGCCCCGACGATCTCGCCGCGGTACCCGCCCTGCTC
GAAGCCGACCACATCGACGTCGACCCATGGCGGGCCATCGGTGACTGGCTGGCCGCCTGCTCCGCGGACACCGCCGTCGC
GCGGGCCCGTCTACTCGGGATGCCCGCCGCGATGCTCGTCGAGGCGGCGCCCGCGCAACCCGTCGTCCAGCGGATCACCA
CCCAGGCGCCGCCGCGTCCGTGGACGGATCTGCTGGTGATCGAACTGGCATCGATGTGGGCCGGACCGCTGCTCGGCCGC
ATGCTCGTCCGGGCCGGCGCGACGGTCGTCAAGGTCGAGAGCCTGGCACGCCCGGACGGCACCCGGCGCGGATCGCCTGA
GTTCTTCGACTGGATGAACGGTGGAAAGCACTGCATCACGGTCGATTTCGACGAAACCACACAACTGAGCGCATTACTCG
CGGCCGCGGACGTGGTGATCGAGGGGTCCCGTCCCGCCGCGTTGGCCCGGCGCGGCCTCGGGCCCGACGTCGTCCCCGCG
CGCGAAGGCCGTGTGTGGGTGCGGATCACCGGGCACGGCACCGTGGGGGATCGCGCCGACTGGGTGGCTTTCGGCGACGA
CGCCGCCGTGGCGGGCGGTCTGGTGGGTGCGGCTGCCGACGGTCCGGTCTTCGTCGGTGACGCGATCGCCGACCCGCTCA
CCGGTCTGGAGGCAATGCACGCCGTGGTCGAGTCGCTGCACCGGGGCGGCGGGGAACTCGTCGAGGTGTCGATGGCCGCC
GTCGCGGCGGGCTACGCCGCGCTGCCCGACGAGGGCACCGTCGAGGTGGCCGCCCGTGCGCCGGCCCCGGGTCCACCCGC
CGCGCATCTGGGCGCCGACAACGCCACCGTGCGCGCGGTGGTGGAAAGACGTTTGGCCGCATGCTGA

Upstream 100 bases:

>100_bases
ACTTCTGACCGCGAGCAGACACAAATGTGCCCCATTTCGGGCCGTTTGAGGGACTTTTGCGTCTGCTCGCGGCGGTGGGC
CGGGCACGCGGGACAATGGG

Downstream 100 bases:

>100_bases
TTCGGCGGGCGACCCTGCTCGACGGGACACGGGTCGACATCCGGGCGGCAGAGCGGATCGGCGACGTCGCCGACAGCCTG
GTCCCCGAGCGAGGCGAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Formyl-CoA Transferase; L-Carnitine Dehydratase; Formyl CoA Transferase; CoA-Transferase Family III Family; Acyl-CoA Transferase/Carnitine Dehydratase; Acyl-CoA Transferase/Carnitine Dehydratase-Like Protein; CoA-Transferase

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MVSAFAIPAAVLTHAGRVAAGLPVGVDIPELLTGRAALLDLPAPGRVSAGGASQLLRARDGWCALTLSRPDDLAAVPALL
EADHIDVDPWRAIGDWLAACSADTAVARARLLGMPAAMLVEAAPAQPVVQRITTQAPPRPWTDLLVIELASMWAGPLLGR
MLVRAGATVVKVESLARPDGTRRGSPEFFDWMNGGKHCITVDFDETTQLSALLAAADVVIEGSRPAALARRGLGPDVVPA
REGRVWVRITGHGTVGDRADWVAFGDDAAVAGGLVGAAADGPVFVGDAIADPLTGLEAMHAVVESLHRGGGELVEVSMAA
VAAGYAALPDEGTVEVAARAPAPGPPAAHLGADNATVRAVVERRLAAC

Sequences:

>Translated_368_residues
MVSAFAIPAAVLTHAGRVAAGLPVGVDIPELLTGRAALLDLPAPGRVSAGGASQLLRARDGWCALTLSRPDDLAAVPALL
EADHIDVDPWRAIGDWLAACSADTAVARARLLGMPAAMLVEAAPAQPVVQRITTQAPPRPWTDLLVIELASMWAGPLLGR
MLVRAGATVVKVESLARPDGTRRGSPEFFDWMNGGKHCITVDFDETTQLSALLAAADVVIEGSRPAALARRGLGPDVVPA
REGRVWVRITGHGTVGDRADWVAFGDDAAVAGGLVGAAADGPVFVGDAIADPLTGLEAMHAVVESLHRGGGELVEVSMAA
VAAGYAALPDEGTVEVAARAPAPGPPAAHLGADNATVRAVVERRLAAC
>Mature_368_residues
MVSAFAIPAAVLTHAGRVAAGLPVGVDIPELLTGRAALLDLPAPGRVSAGGASQLLRARDGWCALTLSRPDDLAAVPALL
EADHIDVDPWRAIGDWLAACSADTAVARARLLGMPAAMLVEAAPAQPVVQRITTQAPPRPWTDLLVIELASMWAGPLLGR
MLVRAGATVVKVESLARPDGTRRGSPEFFDWMNGGKHCITVDFDETTQLSALLAAADVVIEGSRPAALARRGLGPDVVPA
REGRVWVRITGHGTVGDRADWVAFGDDAAVAGGLVGAAADGPVFVGDAIADPLTGLEAMHAVVESLHRGGGELVEVSMAA
VAAGYAALPDEGTVEVAARAPAPGPPAAHLGADNATVRAVVERRLAAC

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI24648431, Length=183, Percent_Identity=31.1475409836066, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37672; Mature: 37672

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSAFAIPAAVLTHAGRVAAGLPVGVDIPELLTGRAALLDLPAPGRVSAGGASQLLRARD
CCCCHHHHHHHHHHCCHHHCCCCCCCCCHHHHCCCEEEEECCCCCCCCCCCHHHHHHCCC
GWCALTLSRPDDLAAVPALLEADHIDVDPWRAIGDWLAACSADTAVARARLLGMPAAMLV
CEEEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHH
EAAPAQPVVQRITTQAPPRPWTDLLVIELASMWAGPLLGRMLVRAGATVVKVESLARPDG
HCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCC
TRRGSPEFFDWMNGGKHCITVDFDETTQLSALLAAADVVIEGSRPAALARRGLGPDVVPA
CCCCCCHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHEEEECCCCHHHHHCCCCCCCCCC
REGRVWVRITGHGTVGDRADWVAFGDDAAVAGGLVGAAADGPVFVGDAIADPLTGLEAMH
CCCEEEEEEECCCCCCCCCCEEEECCCHHHHCCCEECCCCCCEEECHHHHCHHHHHHHHH
AVVESLHRGGGELVEVSMAAVAAGYAALPDEGTVEVAARAPAPGPPAAHLGADNATVRAV
HHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHCCCCCHHHHHH
VERRLAAC
HHHHHHCC
>Mature Secondary Structure
MVSAFAIPAAVLTHAGRVAAGLPVGVDIPELLTGRAALLDLPAPGRVSAGGASQLLRARD
CCCCHHHHHHHHHHCCHHHCCCCCCCCCHHHHCCCEEEEECCCCCCCCCCCHHHHHHCCC
GWCALTLSRPDDLAAVPALLEADHIDVDPWRAIGDWLAACSADTAVARARLLGMPAAMLV
CEEEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHH
EAAPAQPVVQRITTQAPPRPWTDLLVIELASMWAGPLLGRMLVRAGATVVKVESLARPDG
HCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCC
TRRGSPEFFDWMNGGKHCITVDFDETTQLSALLAAADVVIEGSRPAALARRGLGPDVVPA
CCCCCCHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHEEEECCCCHHHHHCCCCCCCCCC
REGRVWVRITGHGTVGDRADWVAFGDDAAVAGGLVGAAADGPVFVGDAIADPLTGLEAMH
CCCEEEEEEECCCCCCCCCCEEEECCCHHHHCCCEECCCCCCEEECHHHHCHHHHHHHHH
AVVESLHRGGGELVEVSMAAVAAGYAALPDEGTVEVAARAPAPGPPAAHLGADNATVRAV
HHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHCCCCCHHHHHH
VERRLAAC
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA