| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797127
Identifier: 108797127
GI number: 108797127
Start: 163753
End: 164361
Strand: Direct
Name: 108797127
Synonym: Mmcs_0147
Alternate gene names: NA
Gene position: 163753-164361 (Clockwise)
Preceding gene: 108797125
Following gene: 108797128
Centisome position: 2.87
GC content: 69.46
Gene sequence:
>609_bases ATGACGTCACGCGCCCTCCGACCGCTTGCCCTGTCCGCCGCGTTGCTCACCGCGCTGTTCCTGTCCGCGTGCACCAGCAC CGAACAGCCGCAGAGCGAAGGTTCCACCTCCCATGCGCACAGCGAAACCGCCGGTGACGCGCATGCTCCGCACAACGCCG ACGACGTCGCCTTCGCCAGGGACATGATGCCGCACCACCAGCAGGCGCTGCAGTTGGTCGACCTCGCCCGGGACCGCTCC AGCGACCCGGCCCTGCAGGGGATCGCCTCGGCGATCGCCGCGGCGCAGGGGCCCGAGATGGACCAGCTCGCCGGCATGCT GCGCGGCTGGGGTCAGGACCCCGAGGCCGGGATGCACCACGGCGGCCACGGCATGGCGATGCCGGGGATGGTCGACGACG CCACGATGAAGCGTCTCGAGTCGCTGCGCGGCGCGGAGTTCGACAGACTGTGGCTGGAATCGATGATCAGCCACCACCAG GGCGCGGTGGAGATGGCCAAGGCCGAGATCGCCAACGGCGACAACGCCGACGCCAAGGCGATGGCCGAGCACATCATCGA GGCCCAGGAGGCGGAGATCGCCCAGATGAAGCAGATGCTGGAGGGTTAG
Upstream 100 bases:
>100_bases TCCTGAACTTCCTGAGGGCATCTATCGATTATGCCTCTGGCGTTTCACCCGGCCAAACCAATTCGGCATACCCCCTTGGG GTATCCAGTACGCTGGTCTC
Downstream 100 bases:
>100_bases CGATGTCCACAGGTGCTCCCGAAGACGTTGCGGTGCACGGCTATTCGGCGCAGAAGGAGAACTACGCGAAACGCCTGCGC CGCATCGAGGGTCAGGTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MTSRALRPLALSAALLTALFLSACTSTEQPQSEGSTSHAHSETAGDAHAPHNADDVAFARDMMPHHQQALQLVDLARDRS SDPALQGIASAIAAAQGPEMDQLAGMLRGWGQDPEAGMHHGGHGMAMPGMVDDATMKRLESLRGAEFDRLWLESMISHHQ GAVEMAKAEIANGDNADAKAMAEHIIEAQEAEIAQMKQMLEG
Sequences:
>Translated_202_residues MTSRALRPLALSAALLTALFLSACTSTEQPQSEGSTSHAHSETAGDAHAPHNADDVAFARDMMPHHQQALQLVDLARDRS SDPALQGIASAIAAAQGPEMDQLAGMLRGWGQDPEAGMHHGGHGMAMPGMVDDATMKRLESLRGAEFDRLWLESMISHHQ GAVEMAKAEIANGDNADAKAMAEHIIEAQEAEIAQMKQMLEG >Mature_201_residues TSRALRPLALSAALLTALFLSACTSTEQPQSEGSTSHAHSETAGDAHAPHNADDVAFARDMMPHHQQALQLVDLARDRSS DPALQGIASAIAAAQGPEMDQLAGMLRGWGQDPEAGMHHGGHGMAMPGMVDDATMKRLESLRGAEFDRLWLESMISHHQG AVEMAKAEIANGDNADAKAMAEHIIEAQEAEIAQMKQMLEG
Specific function: Unknown
COG id: COG3544
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21495; Mature: 21364
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 7.4 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 7.0 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRALRPLALSAALLTALFLSACTSTEQPQSEGSTSHAHSETAGDAHAPHNADDVAFAR CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHH DMMPHHQQALQLVDLARDRSSDPALQGIASAIAAAQGPEMDQLAGMLRGWGQDPEAGMHH HHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHCC GGHGMAMPGMVDDATMKRLESLRGAEFDRLWLESMISHHQGAVEMAKAEIANGDNADAKA CCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH MAEHIIEAQEAEIAQMKQMLEG HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TSRALRPLALSAALLTALFLSACTSTEQPQSEGSTSHAHSETAGDAHAPHNADDVAFAR CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHH DMMPHHQQALQLVDLARDRSSDPALQGIASAIAAAQGPEMDQLAGMLRGWGQDPEAGMHH HHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHCC GGHGMAMPGMVDDATMKRLESLRGAEFDRLWLESMISHHQGAVEMAKAEIANGDNADAKA CCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH MAEHIIEAQEAEIAQMKQMLEG HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA