Definition Mycobacterium sp. MCS chromosome, complete genome.
Accession NC_008146
Length 5,705,448

Click here to switch to the map view.

The map label for this gene is 108797123

Identifier: 108797123

GI number: 108797123

Start: 160228

End: 160743

Strand: Direct

Name: 108797123

Synonym: Mmcs_0143

Alternate gene names: NA

Gene position: 160228-160743 (Clockwise)

Preceding gene: 108797122

Following gene: 108797124

Centisome position: 2.81

GC content: 72.67

Gene sequence:

>516_bases
GTGAGCGGCCGGGACACCCAGCGCGCGAAGGTCTACGCGGCCGAGCAGTTCGTGCGCACCCTGTTCGATCGGGCGGCCGA
ACGCGGCAACCGGATCGTCGAGTTCTTCGGCACCCAGCTGACGCTGCCGCCCGAGGCGCGCTTCGCGTCGGTGGCGTCGG
TGCAGGCCTACGTCGACGACGTCCTGGCCCACCCGCGGATGCGGACCGGCTGGCCCGGCGCCGGTGCGCTCACGGTCCGC
CCGCGTCGCGGCGCGACCGCCGCACACTACGAAGTCGGCGACGGCCGGGCGCTCATCGCGGTGCCCGAACGACACTCCAC
CTGGGCGCTGCGGGAACTGGTGGTGTTGCACGAGATCGCCCACCACCTCAGCCGTGCGGAGCCCGCCCACGGCCCGGCGT
TCGTGTCCACGTTCTGCGAGGTCGCCGAGGCCGTGATGGGTCCGGAGGTCGCCCACGTGCTGCGGGTGGTCTACGCCAAG
GAGGGGGTCCGGATGGGTGGCGGTAGCAAGGGTTAA

Upstream 100 bases:

>100_bases
GATATTCGTCTGCGGCGCGCCGCGCCGGGGACCGCGCCGGGCGACGGGCCCGGCTCGGACCGAGCCAGGAACTGGCCGGC
GCCCGCACGGCCCTGGAGAC

Downstream 100 bases:

>100_bases
CGTGTGCGCGTGAGCGAGCCGAATCCGCAGGCGGTCGACCAGCTTTTCGACCGGTTGCTGCACACCGAGGACGATGCGTT
GATCGCGGCCAGGGAGTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MSGRDTQRAKVYAAEQFVRTLFDRAAERGNRIVEFFGTQLTLPPEARFASVASVQAYVDDVLAHPRMRTGWPGAGALTVR
PRRGATAAHYEVGDGRALIAVPERHSTWALRELVVLHEIAHHLSRAEPAHGPAFVSTFCEVAEAVMGPEVAHVLRVVYAK
EGVRMGGGSKG

Sequences:

>Translated_171_residues
MSGRDTQRAKVYAAEQFVRTLFDRAAERGNRIVEFFGTQLTLPPEARFASVASVQAYVDDVLAHPRMRTGWPGAGALTVR
PRRGATAAHYEVGDGRALIAVPERHSTWALRELVVLHEIAHHLSRAEPAHGPAFVSTFCEVAEAVMGPEVAHVLRVVYAK
EGVRMGGGSKG
>Mature_170_residues
SGRDTQRAKVYAAEQFVRTLFDRAAERGNRIVEFFGTQLTLPPEARFASVASVQAYVDDVLAHPRMRTGWPGAGALTVRP
RRGATAAHYEVGDGRALIAVPERHSTWALRELVVLHEIAHHLSRAEPAHGPAFVSTFCEVAEAVMGPEVAHVLRVVYAKE
GVRMGGGSKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18596; Mature: 18465

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGRDTQRAKVYAAEQFVRTLFDRAAERGNRIVEFFGTQLTLPPEARFASVASVQAYVDD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHCCCCCCCCHHHHHHHHHHHHHHHH
VLAHPRMRTGWPGAGALTVRPRRGATAAHYEVGDGRALIAVPERHSTWALRELVVLHEIA
HHHCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHH
HHLSRAEPAHGPAFVSTFCEVAEAVMGPEVAHVLRVVYAKEGVRMGGGSKG
HHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SGRDTQRAKVYAAEQFVRTLFDRAAERGNRIVEFFGTQLTLPPEARFASVASVQAYVDD
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHCCCCCCCCHHHHHHHHHHHHHHHH
VLAHPRMRTGWPGAGALTVRPRRGATAAHYEVGDGRALIAVPERHSTWALRELVVLHEIA
HHHCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHH
HHLSRAEPAHGPAFVSTFCEVAEAVMGPEVAHVLRVVYAKEGVRMGGGSKG
HHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA