| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797105
Identifier: 108797105
GI number: 108797105
Start: 141311
End: 142282
Strand: Direct
Name: 108797105
Synonym: Mmcs_0125
Alternate gene names: NA
Gene position: 141311-142282 (Clockwise)
Preceding gene: 108797104
Following gene: 108797106
Centisome position: 2.48
GC content: 71.4
Gene sequence:
>972_bases GTGACGGCCGTCGTCGACGCACCGCCCGACGCGCCGGCCGCCGAGACAACGCCGGCCGAACCGCTGGCCAGATGGCATGT GCGGGCCGCGGCGCTCGCGGTCGACGTGCTACCGGGGCTGGCCGTGGTCGCGACGACCGCGCCGTGGGTCCTGGCCGGAC CGGGGATCGGCTGGTCCTGGTGGGTGCTGACGGCGGTGGCGGCCGTCGCCCTGCTCGCGGTGATCGTCAACCGGGTGCTG TTGCCTTCGCTGATCGGCTGGACCCTGGGCCGCGCCCTGTGCGGGATCCGCGTGCTGCGCCGCGACGGCGGCGAGGCGGC ACTCGGGCGGCTGCTGCTGCGGGAACTGGCCCACGTGCTCGACACCGTGGCGTTGTTCGTCGGCTGGCTGTGGCCGCTGT GGGACCGCCGCAACCGCACGTTCGCCGACCTGTTGCTGCGCACGGAGGCCCGCGTCGTCGCTCGCCCGGACCGTGATATG CGCCGCTTCACCGCGAAGGTGCTGATCGGTGCGGTGGTGGTGGCCGTTGCGGCGGTGGGCGTGACCTACCTGGCGGTGTA CCGCAAGGAGCAGGGACTCGACCGGGCCCGGGCGCAGATCGCCGAACAGGGCCCGCGGATCGTCGAGCAGATGCTGAGCT ACGGCGCCGAGACGATGGACGAGGACCTCAACCGCGCACAGACGTTGACCACGGAGGCCTACCGGCCGCAGTTGGTGGCG CAACAGGAGGCCGCCCGCAAGGGCGGTGCGACCACCAACGAGTACTGGGCGGTGAGCAGCGCCGTGCTGTCGTCGTCGAT GGACGAGGCGGCGATGCTGCTGGCCATGCAGGGGCAGCGCGGCACCAAGGCCGAGGATCTCAAGTTCATCACCGCCACGG TGCGGGTGGACTTCGACAAGATCGGTGACAACTGGCGAGTGGACAATCTGACGGTGCTCAAGGCGCCGCTGATGCAGGGA GCCGGTCAGTGA
Upstream 100 bases:
>100_bases ACTCCGAGTCCGCCGACCAGGAGCAGGGCTACCGCCTGCGGGTCCAGATGGCGCCCGACGACGGCACCTACAAGGTCGCC CGACTCGACCAGGTGACTTC
Downstream 100 bases:
>100_bases GCCCGCGCCGCAGGGTCGACGGGGACGAACCCGACTTCTTCGCGGTGTCGCCGAGGCGGCCGCGCCGGTGGGGGCTGCCG CTGATCGCGACGGTGGCCGC
Product: RDD domain-containing protein
Products: NA
Alternate protein names: Mce Associated Transmembrane Protein
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTAVVDAPPDAPAAETTPAEPLARWHVRAAALAVDVLPGLAVVATTAPWVLAGPGIGWSWWVLTAVAAVALLAVIVNRVL LPSLIGWTLGRALCGIRVLRRDGGEAALGRLLLRELAHVLDTVALFVGWLWPLWDRRNRTFADLLLRTEARVVARPDRDM RRFTAKVLIGAVVVAVAAVGVTYLAVYRKEQGLDRARAQIAEQGPRIVEQMLSYGAETMDEDLNRAQTLTTEAYRPQLVA QQEAARKGGATTNEYWAVSSAVLSSSMDEAAMLLAMQGQRGTKAEDLKFITATVRVDFDKIGDNWRVDNLTVLKAPLMQG AGQ
Sequences:
>Translated_323_residues MTAVVDAPPDAPAAETTPAEPLARWHVRAAALAVDVLPGLAVVATTAPWVLAGPGIGWSWWVLTAVAAVALLAVIVNRVL LPSLIGWTLGRALCGIRVLRRDGGEAALGRLLLRELAHVLDTVALFVGWLWPLWDRRNRTFADLLLRTEARVVARPDRDM RRFTAKVLIGAVVVAVAAVGVTYLAVYRKEQGLDRARAQIAEQGPRIVEQMLSYGAETMDEDLNRAQTLTTEAYRPQLVA QQEAARKGGATTNEYWAVSSAVLSSSMDEAAMLLAMQGQRGTKAEDLKFITATVRVDFDKIGDNWRVDNLTVLKAPLMQG AGQ >Mature_322_residues TAVVDAPPDAPAAETTPAEPLARWHVRAAALAVDVLPGLAVVATTAPWVLAGPGIGWSWWVLTAVAAVALLAVIVNRVLL PSLIGWTLGRALCGIRVLRRDGGEAALGRLLLRELAHVLDTVALFVGWLWPLWDRRNRTFADLLLRTEARVVARPDRDMR RFTAKVLIGAVVVAVAAVGVTYLAVYRKEQGLDRARAQIAEQGPRIVEQMLSYGAETMDEDLNRAQTLTTEAYRPQLVAQ QEAARKGGATTNEYWAVSSAVLSSSMDEAAMLLAMQGQRGTKAEDLKFITATVRVDFDKIGDNWRVDNLTVLKAPLMQGA GQ
Specific function: Unknown
COG id: COG1714
COG function: function code S; Predicted membrane protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35020; Mature: 34889
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVVDAPPDAPAAETTPAEPLARWHVRAAALAVDVLPGLAVVATTAPWVLAGPGIGWSW CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEECCCCCHHH WVLTAVAAVALLAVIVNRVLLPSLIGWTLGRALCGIRVLRRDGGEAALGRLLLRELAHVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH DTVALFVGWLWPLWDRRNRTFADLLLRTEARVVARPDRDMRRFTAKVLIGAVVVAVAAVG HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH VTYLAVYRKEQGLDRARAQIAEQGPRIVEQMLSYGAETMDEDLNRAQTLTTEAYRPQLVA HHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHH QQEAARKGGATTNEYWAVSSAVLSSSMDEAAMLLAMQGQRGTKAEDLKFITATVRVDFDK HHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHEEEEEEEEEEHHH IGDNWRVDNLTVLKAPLMQGAGQ CCCCEEECCCHHHHHHHHCCCCC >Mature Secondary Structure TAVVDAPPDAPAAETTPAEPLARWHVRAAALAVDVLPGLAVVATTAPWVLAGPGIGWSW CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEECCCCCHHH WVLTAVAAVALLAVIVNRVLLPSLIGWTLGRALCGIRVLRRDGGEAALGRLLLRELAHVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH DTVALFVGWLWPLWDRRNRTFADLLLRTEARVVARPDRDMRRFTAKVLIGAVVVAVAAVG HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH VTYLAVYRKEQGLDRARAQIAEQGPRIVEQMLSYGAETMDEDLNRAQTLTTEAYRPQLVA HHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHH QQEAARKGGATTNEYWAVSSAVLSSSMDEAAMLLAMQGQRGTKAEDLKFITATVRVDFDK HHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHEEEEEEEEEEHHH IGDNWRVDNLTVLKAPLMQGAGQ CCCCEEECCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA