| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is yhhW [C]
Identifier: 108797065
GI number: 108797065
Start: 98245
End: 99231
Strand: Direct
Name: yhhW [C]
Synonym: Mmcs_0084
Alternate gene names: 108797065
Gene position: 98245-99231 (Clockwise)
Preceding gene: 108797064
Following gene: 108797068
Centisome position: 1.72
GC content: 70.82
Gene sequence:
>987_bases ATGCCTGCCATCACCGCCGACACCCTGACCCTGCCCCGCGTGACGGCGCCCGCGCCGTCCGACACCGAACGCCCCGTCCG CTCCATCACCACCGGTCCCCGCGGCTACGAAGGTGAGGGTTTCCCCGTCGTCCGCGCGTTCGCCGGCGTCAGCGCCGCCG ACCTCGACCCCTTCATCCACATGGACCAGATGGGCGAGGTGGAATACGAGCCGGGCGAACCCCGCGGCACCGACTGGCAT CCCCACCGCGGGTTCGAAACCGTCACCTACATGATCGACGGCCGCTTCGCGCACCAGGACTCCCACGGCGGCGGCGGCCT GATCACCGACGGCGCCACCCAGTGGATGACGGCCGGTTCCGGCATCCTGCACATCGAGACCCCGCCCGCCGAACTCGTCG AGAGCGGCGGACTGTTCCACGGCATCCAGCTCTGGGTGAACCTGCCGCGCAAGGACAAGTTCGCCACACCGCGCTATCAG GCCATCGAGGGCGGCCAGGTCAAGATGCTGGCGTCCGAGGACGGCGGCGCGCTGATCCGCATCATCGCCGGGGACGTCGA CAGCCAGGACGGTCCCGCGCGCGGTCCCGGTGCCACCCACACGCCGATCACCATGGCGCATGCGACCGTGGAACCCGGTG CGCGGCTGAACATCCCGTGGAACCGCGACTTCAACGCGCTGGTGTACGTGCTGTCCGGACGCGGCGCCGTCGGCCCGGTC GGCCATCCGATCCGGCAGGGCCAGCTCGCGGTGTTCGGTCCCGGCGACCGCCTGAGCGTCGCGGCCGAGCCCACCCAGGA CTCCCACCGCCCCGCCCTCGAGGTGCTGATCCTCGGCGGCAGGCCGATCCGTGAGCCGGTCTTCCACTACGGGCCGTTCG TGATGAACTCGAAGTCCGAGCTGATCCGGGCCGTCGAGGACTACCAGGCCGGCAAGTTCGGCACCATCCCGCCGAACGCG CTGATGCCGCACACGTCCGGCCGCTGA
Upstream 100 bases:
>100_bases GGCGGTGCTGGCCACGGCGACCGCCGCCGAAGCGCGCGCCGCCGCGCTCGCCGCCCTCGGGTGACGGAATGAATCGGACC GCAGTCCGGTTGATCGGAAC
Downstream 100 bases:
>100_bases CGTCAGCGCCCGGTGGTCAGCGGTTGCTCGGCGCGCGGGTACAGCAGCTCGAGCTCGCCCAGGTGCGCGGCCACGGTGAC CAGCGGGAGCGCCGCGGAGA
Product: Pirin-like protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA2418 [H]
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MPAITADTLTLPRVTAPAPSDTERPVRSITTGPRGYEGEGFPVVRAFAGVSAADLDPFIHMDQMGEVEYEPGEPRGTDWH PHRGFETVTYMIDGRFAHQDSHGGGGLITDGATQWMTAGSGILHIETPPAELVESGGLFHGIQLWVNLPRKDKFATPRYQ AIEGGQVKMLASEDGGALIRIIAGDVDSQDGPARGPGATHTPITMAHATVEPGARLNIPWNRDFNALVYVLSGRGAVGPV GHPIRQGQLAVFGPGDRLSVAAEPTQDSHRPALEVLILGGRPIREPVFHYGPFVMNSKSELIRAVEDYQAGKFGTIPPNA LMPHTSGR
Sequences:
>Translated_328_residues MPAITADTLTLPRVTAPAPSDTERPVRSITTGPRGYEGEGFPVVRAFAGVSAADLDPFIHMDQMGEVEYEPGEPRGTDWH PHRGFETVTYMIDGRFAHQDSHGGGGLITDGATQWMTAGSGILHIETPPAELVESGGLFHGIQLWVNLPRKDKFATPRYQ AIEGGQVKMLASEDGGALIRIIAGDVDSQDGPARGPGATHTPITMAHATVEPGARLNIPWNRDFNALVYVLSGRGAVGPV GHPIRQGQLAVFGPGDRLSVAAEPTQDSHRPALEVLILGGRPIREPVFHYGPFVMNSKSELIRAVEDYQAGKFGTIPPNA LMPHTSGR >Mature_327_residues PAITADTLTLPRVTAPAPSDTERPVRSITTGPRGYEGEGFPVVRAFAGVSAADLDPFIHMDQMGEVEYEPGEPRGTDWHP HRGFETVTYMIDGRFAHQDSHGGGGLITDGATQWMTAGSGILHIETPPAELVESGGLFHGIQLWVNLPRKDKFATPRYQA IEGGQVKMLASEDGGALIRIIAGDVDSQDGPARGPGATHTPITMAHATVEPGARLNIPWNRDFNALVYVLSGRGAVGPVG HPIRQGQLAVFGPGDRLSVAAEPTQDSHRPALEVLILGGRPIREPVFHYGPFVMNSKSELIRAVEDYQAGKFGTIPPNAL MPHTSGR
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=281, Percent_Identity=34.5195729537367, Blast_Score=155, Evalue=5e-38, Organism=Homo sapiens, GI4505823, Length=281, Percent_Identity=34.5195729537367, Blast_Score=155, Evalue=5e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 35092; Mature: 34961
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAITADTLTLPRVTAPAPSDTERPVRSITTGPRGYEGEGFPVVRAFAGVSAADLDPFIH CCCCCCCCEECCEEECCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCHHCCCCEEE MDQMGEVEYEPGEPRGTDWHPHRGFETVTYMIDGRFAHQDSHGGGGLITDGATQWMTAGS CCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCEEECCCCCCCCEEEECCCHHHEECCC GILHIETPPAELVESGGLFHGIQLWVNLPRKDKFATPRYQAIEGGQVKMLASEDGGALIR CEEEEECCHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEEEECCCEEEEEEECCCCEEEE IIAGDVDSQDGPARGPGATHTPITMAHATVEPGARLNIPWNRDFNALVYVLSGRGAVGPV EEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEECCCCCCCCEEEEEEECCCCCCCC GHPIRQGQLAVFGPGDRLSVAAEPTQDSHRPALEVLILGGRPIREPVFHYGPFVMNSKSE CCCCCCCCEEEECCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCHHHCCCEEECCHHH LIRAVEDYQAGKFGTIPPNALMPHTSGR HHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PAITADTLTLPRVTAPAPSDTERPVRSITTGPRGYEGEGFPVVRAFAGVSAADLDPFIH CCCCCCCEECCEEECCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCHHCCCCEEE MDQMGEVEYEPGEPRGTDWHPHRGFETVTYMIDGRFAHQDSHGGGGLITDGATQWMTAGS CCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCEEECCCCCCCCEEEECCCHHHEECCC GILHIETPPAELVESGGLFHGIQLWVNLPRKDKFATPRYQAIEGGQVKMLASEDGGALIR CEEEEECCHHHHHHCCCCEEEEEEEEECCCCCCCCCCCEEEECCCEEEEEEECCCCEEEE IIAGDVDSQDGPARGPGATHTPITMAHATVEPGARLNIPWNRDFNALVYVLSGRGAVGPV EEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEECCCCCCCCEEEEEEECCCCCCCC GHPIRQGQLAVFGPGDRLSVAAEPTQDSHRPALEVLILGGRPIREPVFHYGPFVMNSKSE CCCCCCCCEEEECCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCHHHCCCEEECCHHH LIRAVEDYQAGKFGTIPPNALMPHTSGR HHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]