| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is espH [H]
Identifier: 108797044
GI number: 108797044
Start: 73767
End: 74273
Strand: Direct
Name: espH [H]
Synonym: Mmcs_0063
Alternate gene names: 108797044
Gene position: 73767-74273 (Clockwise)
Preceding gene: 108797043
Following gene: 108797045
Centisome position: 1.29
GC content: 68.44
Gene sequence:
>507_bases ATGGCGGGTGACTTTTCGACGCGCGACCCCGATGACGACGCCGACGACCTGTCGGCGCTCGACTTCTACCGGCCGGTGCC CGTCGAGGACGACGGTGAGGTGGACGGCGGGGACCTCGCCGCGCTCGACGCGTTCGCCGGGTACGGACTGTCCGACGAGC CCGAGCCCGAGCCCGAACCGCTGTTCACGGTGACCAATCCACCTGGCACCGTCACCGTCACCAGCTACCTCGACGGCCGG GTCCAGCACATCGACCTGTCACCGCGGGCGGTGCACATGTCCGAAACCGAACTCGCGGAGGAGATCGTGGTGATCGCGGG ACTGGCCGCACAGGACGCCAAGTCGGCGCAGTACGAGTTCATGCTCGACGGGATGCGCGAACAGGGCCACGACGACCCCG CGACCCGCGACTTCCTGCAGCGCGACCTCGAACTGCCCACCCCCGAAGAGGCCCGAGCGCACCGCGCCGAGGTCTTCACC ACCAGGTATGCAGGTAGCCATGAGTGA
Upstream 100 bases:
>100_bases GCAGCGCGCGCTCGACGGGCTGGTCGACTTCCTCCCGTCGAAGACGTGGTTCGACCACAGCGACGCCGACGCCTCCCACG GGGAGTGAGCGGAACCCTCC
Downstream 100 bases:
>100_bases TCACCTGGCCAGCCTGTTCGGCAGTGCGGTCGGCATGCTGCCCAACGCCCCCGCCCGTTCCTACGAGCTGTTCACCGACA TCACCAACTACGACGAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MAGDFSTRDPDDDADDLSALDFYRPVPVEDDGEVDGGDLAALDAFAGYGLSDEPEPEPEPLFTVTNPPGTVTVTSYLDGR VQHIDLSPRAVHMSETELAEEIVVIAGLAAQDAKSAQYEFMLDGMREQGHDDPATRDFLQRDLELPTPEEARAHRAEVFT TRYAGSHE
Sequences:
>Translated_168_residues MAGDFSTRDPDDDADDLSALDFYRPVPVEDDGEVDGGDLAALDAFAGYGLSDEPEPEPEPLFTVTNPPGTVTVTSYLDGR VQHIDLSPRAVHMSETELAEEIVVIAGLAAQDAKSAQYEFMLDGMREQGHDDPATRDFLQRDLELPTPEEARAHRAEVFT TRYAGSHE >Mature_167_residues AGDFSTRDPDDDADDLSALDFYRPVPVEDDGEVDGGDLAALDAFAGYGLSDEPEPEPEPLFTVTNPPGTVTVTSYLDGRV QHIDLSPRAVHMSETELAEEIVVIAGLAAQDAKSAQYEFMLDGMREQGHDDPATRDFLQRDLELPTPEEARAHRAEVFTT RYAGSHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18367; Mature: 18236
Theoretical pI: Translated: 3.84; Mature: 3.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGDFSTRDPDDDADDLSALDFYRPVPVEDDGEVDGGDLAALDAFAGYGLSDEPEPEPEP CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC LFTVTNPPGTVTVTSYLDGRVQHIDLSPRAVHMSETELAEEIVVIAGLAAQDAKSAQYEF EEEEECCCCCEEEEECCCCEEEEEECCCCEEECCHHHHHHHHHHHHCCCCCCCCCCHHHH MLDGMREQGHDDPATRDFLQRDLELPTPEEARAHRAEVFTTRYAGSHE HHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCCC >Mature Secondary Structure AGDFSTRDPDDDADDLSALDFYRPVPVEDDGEVDGGDLAALDAFAGYGLSDEPEPEPEP CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC LFTVTNPPGTVTVTSYLDGRVQHIDLSPRAVHMSETELAEEIVVIAGLAAQDAKSAQYEF EEEEECCCCCEEEEECCCCEEEEEECCCCEEECCHHHHHHHHHHHHCCCCCCCCCCHHHH MLDGMREQGHDDPATRDFLQRDLELPTPEEARAHRAEVFTTRYAGSHE HHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230 [H]