| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is aroB [H]
Identifier: 108764062
GI number: 108764062
Start: 4101528
End: 4102508
Strand: Reverse
Name: aroB [H]
Synonym: MXAN_3521
Alternate gene names: 108764062
Gene position: 4102508-4101528 (Counterclockwise)
Preceding gene: 108756994
Following gene: 108757763
Centisome position: 44.89
GC content: 71.97
Gene sequence:
>981_bases GTGGCGGTGGTGGACCGCACCGTCGCGAAGCTCCACCCCTCCCTCATCCCCACCCTGGAGGCGCGCAGCCCCCGCGCCAT CATCCAGCTCACCGGCGGCGAGAGCGCCAAGACGTTCACCGCCCTGGAGAAGGTCCTCGCCAACGGACTGGCCCTTCCGC GCTCCGGCACGCTCGTGGCCGTGGGCGGCGGCACCATCGGTGACGTCTCCACCGTGGCCGCGCATGTCCTCAAGCGCGGC GTGCGCCTGGTGCAGGTCCCCACCACGCTGCTGGCGGCGGTGGACAGCAGCGTTGGCGGCAAGGGCGCTGTCGACATGAC GGTGCGCGGGCGCGTGGTGAAGAACCCGGCCGGCGTCTTCCACTACGCGGACGAAGGCTGGGTGTGCCCCGAGTTCTTCG ACACGCTCTCCGATGCGCAGCGCCGCGAGGGCGCGCTGGAGGCCTGGAAGATGGTGGTCAGCCTCGACGCGCCGCTCTTC CGCCGCTATGTGCGCAAGCCGCCCGCGCTCGAGAAGCTCGTGAAGGACGCCCGCGCCCTCAAGGAGCGCATCTGCGCGCA GGACCCGTACGAGCACACGGGGCTGCGCCGGGTGCTCAACTTCGGCCACACCTTCGGCCACGTGCTGGAGAGCGTGTCCC GCTTCAAGCTGTCCCACGGTGACGGCGTGGGTCTGGGCATGCTGCTGGCCCTGGACGTGGGCCGTCACCTGGGCGTGACA CCGGAGCCCGTGGCCGCCGAGGTCGAAGCCGCCCTGGCCAATGGCCCCGGCGTGCAGGGCCGCGAGCGCGCCGCCGCCCT GCTCCGCCGCGCGCCGATGAAGGACGTGCGGGCGCTGCTCACCGCCGACAAGAAGGCCGGCGCCAAGGGCGAGCTGCGCA TGGTGCTGCTGACGGCCATTGGCGCCACCGAGGTGCGTGACGTGGACGAATCAAGCTGGCGTGCCTTGTGGCCCGCGTGG ACGAAGGGGGAGCGACCATGA
Upstream 100 bases:
>100_bases CCCACGCGCCATGAGTGCTCTTCCTCCCGGGGCCTACCGTCCGCCGTCCGATCGCTGGGGCACCTTCGCCCGCCTCGCCA GGAACCTGCCCGAGGGCAGC
Downstream 100 bases:
>100_bases GCACGGCGAAGGCTTCCCGTATCGTGGTGGACCCATCCGCGCTGCACGCCGCGCCCCTCACCCCGCCAGTGTCCAAGTCG GACGCGCAGCGGGCGCTGGT
Product: putative 3-dehydroquinate synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MAVVDRTVAKLHPSLIPTLEARSPRAIIQLTGGESAKTFTALEKVLANGLALPRSGTLVAVGGGTIGDVSTVAAHVLKRG VRLVQVPTTLLAAVDSSVGGKGAVDMTVRGRVVKNPAGVFHYADEGWVCPEFFDTLSDAQRREGALEAWKMVVSLDAPLF RRYVRKPPALEKLVKDARALKERICAQDPYEHTGLRRVLNFGHTFGHVLESVSRFKLSHGDGVGLGMLLALDVGRHLGVT PEPVAAEVEAALANGPGVQGRERAAALLRRAPMKDVRALLTADKKAGAKGELRMVLLTAIGATEVRDVDESSWRALWPAW TKGERP
Sequences:
>Translated_326_residues MAVVDRTVAKLHPSLIPTLEARSPRAIIQLTGGESAKTFTALEKVLANGLALPRSGTLVAVGGGTIGDVSTVAAHVLKRG VRLVQVPTTLLAAVDSSVGGKGAVDMTVRGRVVKNPAGVFHYADEGWVCPEFFDTLSDAQRREGALEAWKMVVSLDAPLF RRYVRKPPALEKLVKDARALKERICAQDPYEHTGLRRVLNFGHTFGHVLESVSRFKLSHGDGVGLGMLLALDVGRHLGVT PEPVAAEVEAALANGPGVQGRERAAALLRRAPMKDVRALLTADKKAGAKGELRMVLLTAIGATEVRDVDESSWRALWPAW TKGERP >Mature_325_residues AVVDRTVAKLHPSLIPTLEARSPRAIIQLTGGESAKTFTALEKVLANGLALPRSGTLVAVGGGTIGDVSTVAAHVLKRGV RLVQVPTTLLAAVDSSVGGKGAVDMTVRGRVVKNPAGVFHYADEGWVCPEFFDTLSDAQRREGALEAWKMVVSLDAPLFR RYVRKPPALEKLVKDARALKERICAQDPYEHTGLRRVLNFGHTFGHVLESVSRFKLSHGDGVGLGMLLALDVGRHLGVTP EPVAAEVEAALANGPGVQGRERAAALLRRAPMKDVRALLTADKKAGAKGELRMVLLTAIGATEVRDVDESSWRALWPAWT KGERP
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; second step. [C]
COG id: COG0337
COG function: function code E; 3-dehydroquinate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dehydroquinate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1789791, Length=300, Percent_Identity=35, Blast_Score=111, Evalue=5e-26, Organism=Saccharomyces cerevisiae, GI6320332, Length=288, Percent_Identity=29.8611111111111, Blast_Score=100, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016303 - InterPro: IPR002658 - InterPro: IPR016037 [H]
Pfam domain/function: PF01761 DHQ_synthase [H]
EC number: =4.2.3.4 [H]
Molecular weight: Translated: 34900; Mature: 34769
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVVDRTVAKLHPSLIPTLEARSPRAIIQLTGGESAKTFTALEKVLANGLALPRSGTLVA CCCHHHHHHHHCHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEE VGGGTIGDVSTVAAHVLKRGVRLVQVPTTLLAAVDSSVGGKGAVDMTVRGRVVKNPAGVF ECCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCCCCEEEEECCEEECCCCCEE HYADEGWVCPEFFDTLSDAQRREGALEAWKMVVSLDAPLFRRYVRKPPALEKLVKDARAL EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHH KERICAQDPYEHTGLRRVLNFGHTFGHVLESVSRFKLSHGDGVGLGMLLALDVGRHLGVT HHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC PEPVAAEVEAALANGPGVQGRERAAALLRRAPMKDVRALLTADKKAGAKGELRMVLLTAI CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEEHH GATEVRDVDESSWRALWPAWTKGERP CCHHHHCCCCCCCCEECCCCCCCCCC >Mature Secondary Structure AVVDRTVAKLHPSLIPTLEARSPRAIIQLTGGESAKTFTALEKVLANGLALPRSGTLVA CCHHHHHHHHCHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEE VGGGTIGDVSTVAAHVLKRGVRLVQVPTTLLAAVDSSVGGKGAVDMTVRGRVVKNPAGVF ECCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCCCCCEEEEECCEEECCCCCEE HYADEGWVCPEFFDTLSDAQRREGALEAWKMVVSLDAPLFRRYVRKPPALEKLVKDARAL EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHH KERICAQDPYEHTGLRRVLNFGHTFGHVLESVSRFKLSHGDGVGLGMLLALDVGRHLGVT HHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC PEPVAAEVEAALANGPGVQGRERAAALLRRAPMKDVRALLTADKKAGAKGELRMVLLTAI CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEEHH GATEVRDVDESSWRALWPAWTKGERP CCHHHHCCCCCCCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA