| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763397
Identifier: 108763397
GI number: 108763397
Start: 5565968
End: 5567539
Strand: Direct
Name: 108763397
Synonym: MXAN_4496
Alternate gene names: NA
Gene position: 5565968-5567539 (Clockwise)
Preceding gene: 108759207
Following gene: 108759210
Centisome position: 60.9
GC content: 70.55
Gene sequence:
>1572_bases ATGCGGCGACTGACCTTCGAAGTCACAGAACGCGCGGCGCCCACCGCGCCCGAGCGGATGGACGTTGCCCTCTTCGTGGG CTTCGTCCGCCGTCGACCGGGCACTTCCGTGCCCGCCGCGCTGTCCCGCTACCTGTTCGAGCAGGGGTGGATGACCGCCC CCACGCTCCGCGTGGACCCCAACGATCCGCAGGCCCCGCTCACCGACGTCCCCCTGCCCTTCGAGAGCTTCGCCGCCTTC GAGCGCATCTTCGACTGGCGAGCCCGCGCCGGAACCGCCCCCGACGAGTTCACCGCTCTGGGAGCGGCGGTGCAGGCCTT CTTCGTCCAGGGCGGGCGCAAGTGCTACGTGGTGCGCATGGCGGACCCGCTCACTTCAGGGGCGGAGCGCGCCACGCGGC TCGGGCGGCTGAACCTGCTGCTGCCGGGCAGCAGAGTGCCGGCGCCTCCCGGCATGGAGCACCCCGCCTCCGCCGTGGAC CGCACGACGTGGCACGGCGCGGCCCACCTGTTCGGCCTTCAGGATGTGTGCTTCCTCTGCCTTCCAGACCTGCCGGAGCT GGTGGCGGATGCGCCCGAGCCACTCCCCATCCCCCGCCTGCCACCCGCGGGTGCCACAGGGTTCGTGGAATGCGCCACGC ATGGCGCGGCCACCGGGTCCGAGTGGAAGACGCCGGAGCGCGCGGCGCCTCGCTGCGGACTCACAGCCTACCTGGACTGG GCGGCCTTCCTCGCCGTAGTGGCCGAGCTCCTCCGCGACAGGCGCCTGCGGGAGACGCACCTGGTCGCGGCGCTGCCGCT GCCCTCGACAAGCCTGGTCTTCGATACTTCCGCGGGCAAGCGCGCCGCGACGCAGGATTTGGGCGCGTTCATCCATGCCA GCGGAGTGCTCACCCCATTCCAGAGCGCGTTCATCCAGCTCGCCTATCCGTGGCTGAGGACCGCGTCCTCGGAGGGACTT CCGGAGCGGTTGGCGGCCCCTGACGGGGCGCTGACGGGGGTGCTGGCACGCAACGCACTGCTTCGCGGCACCTTCCGAAG CGCCCTGGGACTGGGGCTCGCGGAGGTACGAGAGGTCTTCCCAATCCCAACACGCCTGGACCAGGAACCACGCGATCCGG GGTCGCCGCTGCGCGCACTGGGCGAGCGCGTCACGTTGCTGGGGCCCACGCCCCGCGGAATGCAGGTGTTGTCCGACGTG ACGTCCAGCCAGAGGGTCAGCCACCGCCAGGCTCCGGTGAGCCGGCTCATCTCCTCGGTGCTGCGAGCGGCGAGGCAACT CGGCGCGGACCTGACGTTTTCACCCTCCAACGAGGACACCTGGTTGGCGCTGCGCTACCGGATGGAGTCCGTGCTCGGCC GGTTCTTCGCAGAGGGCGCTCTGCGAGGAGCGACGCCGCGCGAGGCTTTCTCCGTGCGGTGTGACCGGACGACCATGACG CAGGACGACCTCGATAACGGGCGGCTCATCGCGCTGGTGGAATTGGCTCCCGCGGCGGCAATCGAACGGGTGCAGGTCCT TCTCTCCGCGTTGGAGGGTGACGTGTCACTCCAGCAGGAGGAAGCCGCATGA
Upstream 100 bases:
>100_bases GGAGACGTGGCCATGGAAGAGCTCGTCCTCGCCGCTGAAACGGTGCGGATGGGCTTCCCGGACGTGGACTGAGCGGAGCA TCAGGGGGAGCTCCCGGGCC
Downstream 100 bases:
>100_bases GCGGAGACCTCTGGCCACTGCACACCTTCCGCTTCGAACTCACCTTCCAGCCCGAGCCGCTGTCGGGCAGTGGCCCGGAA GAGGCACCCGTGGACGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Tail Sheath Protein; Tail Sheath Protein Gp; Phage SPO1 DNA Polymerase-Related Protein; Phage Tail Sheath Protein FI; Phage Tail Sheath Family Protein; Bacteriophage Tail Sheath Protein; Phage Protein
Number of amino acids: Translated: 523; Mature: 523
Protein sequence:
>523_residues MRRLTFEVTERAAPTAPERMDVALFVGFVRRRPGTSVPAALSRYLFEQGWMTAPTLRVDPNDPQAPLTDVPLPFESFAAF ERIFDWRARAGTAPDEFTALGAAVQAFFVQGGRKCYVVRMADPLTSGAERATRLGRLNLLLPGSRVPAPPGMEHPASAVD RTTWHGAAHLFGLQDVCFLCLPDLPELVADAPEPLPIPRLPPAGATGFVECATHGAATGSEWKTPERAAPRCGLTAYLDW AAFLAVVAELLRDRRLRETHLVAALPLPSTSLVFDTSAGKRAATQDLGAFIHASGVLTPFQSAFIQLAYPWLRTASSEGL PERLAAPDGALTGVLARNALLRGTFRSALGLGLAEVREVFPIPTRLDQEPRDPGSPLRALGERVTLLGPTPRGMQVLSDV TSSQRVSHRQAPVSRLISSVLRAARQLGADLTFSPSNEDTWLALRYRMESVLGRFFAEGALRGATPREAFSVRCDRTTMT QDDLDNGRLIALVELAPAAAIERVQVLLSALEGDVSLQQEEAA
Sequences:
>Translated_523_residues MRRLTFEVTERAAPTAPERMDVALFVGFVRRRPGTSVPAALSRYLFEQGWMTAPTLRVDPNDPQAPLTDVPLPFESFAAF ERIFDWRARAGTAPDEFTALGAAVQAFFVQGGRKCYVVRMADPLTSGAERATRLGRLNLLLPGSRVPAPPGMEHPASAVD RTTWHGAAHLFGLQDVCFLCLPDLPELVADAPEPLPIPRLPPAGATGFVECATHGAATGSEWKTPERAAPRCGLTAYLDW AAFLAVVAELLRDRRLRETHLVAALPLPSTSLVFDTSAGKRAATQDLGAFIHASGVLTPFQSAFIQLAYPWLRTASSEGL PERLAAPDGALTGVLARNALLRGTFRSALGLGLAEVREVFPIPTRLDQEPRDPGSPLRALGERVTLLGPTPRGMQVLSDV TSSQRVSHRQAPVSRLISSVLRAARQLGADLTFSPSNEDTWLALRYRMESVLGRFFAEGALRGATPREAFSVRCDRTTMT QDDLDNGRLIALVELAPAAAIERVQVLLSALEGDVSLQQEEAA >Mature_523_residues MRRLTFEVTERAAPTAPERMDVALFVGFVRRRPGTSVPAALSRYLFEQGWMTAPTLRVDPNDPQAPLTDVPLPFESFAAF ERIFDWRARAGTAPDEFTALGAAVQAFFVQGGRKCYVVRMADPLTSGAERATRLGRLNLLLPGSRVPAPPGMEHPASAVD RTTWHGAAHLFGLQDVCFLCLPDLPELVADAPEPLPIPRLPPAGATGFVECATHGAATGSEWKTPERAAPRCGLTAYLDW AAFLAVVAELLRDRRLRETHLVAALPLPSTSLVFDTSAGKRAATQDLGAFIHASGVLTPFQSAFIQLAYPWLRTASSEGL PERLAAPDGALTGVLARNALLRGTFRSALGLGLAEVREVFPIPTRLDQEPRDPGSPLRALGERVTLLGPTPRGMQVLSDV TSSQRVSHRQAPVSRLISSVLRAARQLGADLTFSPSNEDTWLALRYRMESVLGRFFAEGALRGATPREAFSVRCDRTTMT QDDLDNGRLIALVELAPAAAIERVQVLLSALEGDVSLQQEEAA
Specific function: Unknown
COG id: COG3497
COG function: function code R; Phage tail sheath protein FI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56560; Mature: 56560
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLTFEVTERAAPTAPERMDVALFVGFVRRRPGTSVPAALSRYLFEQGWMTAPTLRVDP CCCEEEEHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEECC NDPQAPLTDVPLPFESFAAFERIFDWRARAGTAPDEFTALGAAVQAFFVQGGRKCYVVRM CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEE ADPLTSGAERATRLGRLNLLLPGSRVPAPPGMEHPASAVDRTTWHGAAHLFGLQDVCFLC CCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHCCHHCCHHHHHHHHHHHHHH LPDLPELVADAPEPLPIPRLPPAGATGFVECATHGAATGSEWKTPERAAPRCGLTAYLDW CCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHCCCCCCHHHHHHH AAFLAVVAELLRDRRLRETHLVAALPLPSTSLVFDTSAGKRAATQDLGAFIHASGVLTPF HHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCHH QSAFIQLAYPWLRTASSEGLPERLAAPDGALTGVLARNALLRGTFRSALGLGLAEVREVF HHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC PIPTRLDQEPRDPGSPLRALGERVTLLGPTPRGMQVLSDVTSSQRVSHRQAPVSRLISSV CCCCCCCCCCCCCCCHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRAARQLGADLTFSPSNEDTWLALRYRMESVLGRFFAEGALRGATPREAFSVRCDRTTMT HHHHHHHCCCCEECCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEECCCCCC QDDLDNGRLIALVELAPAAAIERVQVLLSALEGDVSLQQEEAA CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHCCC >Mature Secondary Structure MRRLTFEVTERAAPTAPERMDVALFVGFVRRRPGTSVPAALSRYLFEQGWMTAPTLRVDP CCCEEEEHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEECC NDPQAPLTDVPLPFESFAAFERIFDWRARAGTAPDEFTALGAAVQAFFVQGGRKCYVVRM CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEE ADPLTSGAERATRLGRLNLLLPGSRVPAPPGMEHPASAVDRTTWHGAAHLFGLQDVCFLC CCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHCCHHCCHHHHHHHHHHHHHH LPDLPELVADAPEPLPIPRLPPAGATGFVECATHGAATGSEWKTPERAAPRCGLTAYLDW CCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHCCCCCCHHHHHHH AAFLAVVAELLRDRRLRETHLVAALPLPSTSLVFDTSAGKRAATQDLGAFIHASGVLTPF HHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCHH QSAFIQLAYPWLRTASSEGLPERLAAPDGALTGVLARNALLRGTFRSALGLGLAEVREVF HHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC PIPTRLDQEPRDPGSPLRALGERVTLLGPTPRGMQVLSDVTSSQRVSHRQAPVSRLISSV CCCCCCCCCCCCCCCHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRAARQLGADLTFSPSNEDTWLALRYRMESVLGRFFAEGALRGATPREAFSVRCDRTTMT HHHHHHHCCCCEECCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEECCCCCC QDDLDNGRLIALVELAPAAAIERVQVLLSALEGDVSLQQEEAA CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA