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The map label for this gene is yraN [C]

Identifier: 108763349

GI number: 108763349

Start: 4135145

End: 4135525

Strand: Direct

Name: yraN [C]

Synonym: MXAN_3551

Alternate gene names: 108763349

Gene position: 4135145-4135525 (Clockwise)

Preceding gene: 108763834

Following gene: 108760516

Centisome position: 45.24

GC content: 68.5

Gene sequence:

>381_bases
ATGCGACGGGCGGCGCCGGCTGAGCGGCGGGAGTATGGGAATGCGGGGGAGGAGGCGGCGGTGCGCTTCCTGGAGGCACA
GGGGTGGCGGGTGCGGGATCGCAACTGGACCTGCCGCTTCGGGGAACTGGACGTGGTCGCCGAACGTGACGACCTGGTGT
GCTTCGTGGAAGTGCGGATGCGCTCCACTGCCACCTGGGGCGACCCCTCCCACAGCGTGTCTTTCGCCAAGCAGCGCAGG
GTGGTGAAGGCGGCGCTTCGGTACCTGTTCGCGCATGACTTGCGTGGACGGATGTTCCGTTTCGACGTGATTTCGGTGGT
GGGGCGCGGCGAGCGCGCCACCGTGGACCACATCCCTGGCGCCTTCGACGCGGGGATGTGA

Upstream 100 bases:

>100_bases
CCTCGCACCCGGGCTTCGCACAGATGTCGGACGGGCCCGTTAACGTCTGAGGCGACGTGGCGGGTTACCTCCAGGGGGAG
GGCCGTCAGGGGAGGGGTGG

Downstream 100 bases:

>100_bases
GAGGACGACGCCATGGCTGGAACGCTCTATCTGGTGGCGACGCCCATCGGGAACCTGGGGGACGTCACATCGCGCGCGTT
GGAGACCCTGCGCGCGGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MRRAAPAERREYGNAGEEAAVRFLEAQGWRVRDRNWTCRFGELDVVAERDDLVCFVEVRMRSTATWGDPSHSVSFAKQRR
VVKAALRYLFAHDLRGRMFRFDVISVVGRGERATVDHIPGAFDAGM

Sequences:

>Translated_126_residues
MRRAAPAERREYGNAGEEAAVRFLEAQGWRVRDRNWTCRFGELDVVAERDDLVCFVEVRMRSTATWGDPSHSVSFAKQRR
VVKAALRYLFAHDLRGRMFRFDVISVVGRGERATVDHIPGAFDAGM
>Mature_126_residues
MRRAAPAERREYGNAGEEAAVRFLEAQGWRVRDRNWTCRFGELDVVAERDDLVCFVEVRMRSTATWGDPSHSVSFAKQRR
VVKAALRYLFAHDLRGRMFRFDVISVVGRGERATVDHIPGAFDAGM

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3551_MYXXD (Q1D6H9)

Other databases:

- EMBL:   CP000113
- RefSeq:   YP_631744.1
- ProteinModelPortal:   Q1D6H9
- STRING:   Q1D6H9
- GeneID:   4107105
- GenomeReviews:   CP000113_GR
- KEGG:   mxa:MXAN_3551
- TIGR:   MXAN_3551
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   MAEHNEL
- BioCyc:   MXAN246197:MXAN_3551-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 14418; Mature: 14418

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRAAPAERREYGNAGEEAAVRFLEAQGWRVRDRNWTCRFGELDVVAERDDLVCFVEVRM
CCCCCCCHHHHCCCCCHHHHHHHHHCCCCEEECCCCEEECCCEEEEECCCCEEEEEEEEE
RSTATWGDPSHSVSFAKQRRVVKAALRYLFAHDLRGRMFRFDVISVVGRGERATVDHIPG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCC
AFDAGM
CCCCCC
>Mature Secondary Structure
MRRAAPAERREYGNAGEEAAVRFLEAQGWRVRDRNWTCRFGELDVVAERDDLVCFVEVRM
CCCCCCCHHHHCCCCCHHHHHHHHHCCCCEEECCCCEEECCCEEEEECCCCEEEEEEEEE
RSTATWGDPSHSVSFAKQRRVVKAALRYLFAHDLRGRMFRFDVISVVGRGERATVDHIPG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCC
AFDAGM
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA