| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108763115
Identifier: 108763115
GI number: 108763115
Start: 4384645
End: 4385154
Strand: Reverse
Name: 108763115
Synonym: MXAN_3675
Alternate gene names: NA
Gene position: 4385154-4384645 (Counterclockwise)
Preceding gene: 108759818
Following gene: 108763316
Centisome position: 47.98
GC content: 71.57
Gene sequence:
>510_bases ATGCGCACGCCTACCGCCTTGAGCCTGCTCCTGCTCGGCCTGTCGCCGCTGACCTGGGCATGCAAGCGCGAGCCCCCACC GGCCTATGTCCGGCTCCAGGGGACCGCGCCCACCGTCGCGGACGTGCCGCCCTCCCGCGCCTTGCTCATCGTGTTCTGGG CGTCGTGGTGTCCGCCCTGCAGGCAGGAGACACCCCAGCTCGTCGCCCTGGCCCAAGCGCCCCCCGAGGACCTCCAGGTC GTCGTCTTCAGCCATGACGAGACGCCCCAGGCGGTGGAGTCCTTCTTCAAGGGGCCTCCACCCACGCCGCTTCACCTGCG CCTCGACGTGGACAAACGGGCCGGTGACGCGTTCGGCGCGGACCAGCTCCCCGTCAGCGTCCTCCTGGTCGACGGCCGCC AGGTCGCCCGCTTCTCGGGCCCGCGGGAATGGGATGCCGGCGCGATGCGCCGTCTGCTGGAGCGCCTGATACGCGAACCC TCACCCTCAGCGCCTCGCCCGCTGGATTGA
Upstream 100 bases:
>100_bases TCTAGTCGTTGAACCCCACCGGGCCGGAGCTCCCTCGTGGGCTCCGGCCTGGTCCCAGGCGCGCATGGCAGGCGCCGCGT CTTGAGGTATCACCCTCAGG
Downstream 100 bases:
>100_bases CACCGCCAAGCCCCATTTAATAAGCCGGTCCCGGATGCAGTCCCTTCTGCGATTTCTCGCCGTGCTCCTCGTCCTGATGA CGGGCGGCGTCTTCCAGACG
Product: thioredoxin family protein
Products: NA
Alternate protein names: ThiolDisulfide Interchange Protein TlpA; Redoxin; Redoxin Domain-Containing Protein
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MRTPTALSLLLLGLSPLTWACKREPPPAYVRLQGTAPTVADVPPSRALLIVFWASWCPPCRQETPQLVALAQAPPEDLQV VVFSHDETPQAVESFFKGPPPTPLHLRLDVDKRAGDAFGADQLPVSVLLVDGRQVARFSGPREWDAGAMRRLLERLIREP SPSAPRPLD
Sequences:
>Translated_169_residues MRTPTALSLLLLGLSPLTWACKREPPPAYVRLQGTAPTVADVPPSRALLIVFWASWCPPCRQETPQLVALAQAPPEDLQV VVFSHDETPQAVESFFKGPPPTPLHLRLDVDKRAGDAFGADQLPVSVLLVDGRQVARFSGPREWDAGAMRRLLERLIREP SPSAPRPLD >Mature_169_residues MRTPTALSLLLLGLSPLTWACKREPPPAYVRLQGTAPTVADVPPSRALLIVFWASWCPPCRQETPQLVALAQAPPEDLQV VVFSHDETPQAVESFFKGPPPTPLHLRLDVDKRAGDAFGADQLPVSVLLVDGRQVARFSGPREWDAGAMRRLLERLIREP SPSAPRPLD
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18555; Mature: 18555
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTPTALSLLLLGLSPLTWACKREPPPAYVRLQGTAPTVADVPPSRALLIVFWASWCPPC CCCHHHHHHHHHCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCC RQETPQLVALAQAPPEDLQVVVFSHDETPQAVESFFKGPPPTPLHLRLDVDKRAGDAFGA HHCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCC DQLPVSVLLVDGRQVARFSGPREWDAGAMRRLLERLIREPSPSAPRPLD CCCCEEEEEECCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRTPTALSLLLLGLSPLTWACKREPPPAYVRLQGTAPTVADVPPSRALLIVFWASWCPPC CCCHHHHHHHHHCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCC RQETPQLVALAQAPPEDLQVVVFSHDETPQAVESFFKGPPPTPLHLRLDVDKRAGDAFGA HHCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCC DQLPVSVLLVDGRQVARFSGPREWDAGAMRRLLERLIREPSPSAPRPLD CCCCEEEEEECCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA