| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is uvrA [H]
Identifier: 108762926
GI number: 108762926
Start: 4019866
End: 4022418
Strand: Direct
Name: uvrA [H]
Synonym: MXAN_3452
Alternate gene names: 108762926
Gene position: 4019866-4022418 (Clockwise)
Preceding gene: 108761146
Following gene: 108759828
Centisome position: 43.98
GC content: 69.57
Gene sequence:
>2553_bases ATGGCCAGGGCTCGTCGTTCGAAGCAGCAATCAGACTCGTCAGGTACCACCGAGCAAGGCTTCGTGGAGGTGCGCGGCGC CCGCCAGCACAACCTGAAGAACGTCGACGTCCGAATTCCCCGCGACGCGTTCGTTGTGTTCACCGGCGTGTCGGGCTCGG GCAAGTCGTCGCTGGCCTTCGGCACGCTCTACGCGGAAGCGCAGCGGCGGTACTTCGAATCCGTGGCCCCCTATGCGCGC CGTCTCATCGACCAGGCGGGTGTGCCGGAGGTCGACGCCATCGACGGGCTGCCCCCTGCCGTGGCGCTCCAGCAGCACCG GGGCGCGCCCACCACGCGTTCGTCCGTGGGGAGCGTGACGACGTTGGCGAACTCGTTGCGGTTGCTGTACTCGCGCGCGG GCACGTATCCGCGAGGGCAGCCGCACCTGGATTCGGATGCCTTTTCCCCCAACACCCCCGCGGGCGCGTGCCCCAAGTGC CACGGGCTGGGCCGCATCTACGACGCCACCGAGAAGTCGATGGTGCCGGATGACTCGCTCACCATCCGGGAGCGGGCGAT TGCCGCCTGGCCGCCCGCGTGGCACGGCCAGAACCTGCGCGACATCCTGGTGACGCTCGGCTACGACGTCGACCGGCCGT GGCGCGAGCTGCCGAAGAAGGACCGGGACTGGATTCTCTTCACGGAGGAGCAGCCCACGGTGCCCGTCTACGCGGGCTTC ACTCCGGCCGAGACGCAGCGGGCCCTCAAGCGCAAGGCGGCGCCCAGCTACATGGGCACCTTCACGGGCGCCCGGCGCTA CGTGCTCCAGACCTTCGCCACCACGCAGAGCGCGCTGATGAAGAGGCGCGTCTCGCAGTACATGGTGAGCGGCGACTGCC CCGAATGCCACGGCAAGCGCCTGCGCCGCGAGTCCCTGTCCGTCACCTTCGCGGGGCTCGACATCGGCGAGCTGTCGCGT CTGCCGCTCAGTGAACTCACGGACCTGCTCGCGCCCGTGGCGGATGGGACGGCCAAGGACGTGGCGGCGCTTGCCCGTGT GCATCCGGAGAAGGCGCTGGTGGCCCAGCGCATCGCCCACGACGTGTTGGCGCGCGTCAACGTCCTGACGGAGCTGGGCC TGGGCTACCTGTCGCTCGAGCGCGGAACGCCGACGCTGTCTCCTGGCGAGCTCCAGCGCTTGCGGCTGGCCACGCAGGTG CGCTCCAACCTGTTCGGCGTGGTGTACGTGCTCGATGAGCCGTCCGCTGGGCTGCACCCCGCGGACACCGCGGCGCTGCT GAAGGCGCTGGACCAGCTCAAGGGCTCAGGCAACTCGCTGTTCGTGGTGGAGCACGAGGTGGATGTCATCCGCCACGCGG ACTGGATTGTCGACGTGGGGCCCGACGCGGGCGAGCAGGGCGGGCAGATTCTCTACAGCGGTCCGCTCGAAGGCCTGAAG GCGGTGAAGGCGTCCCGGACGCGGCGCTATCTCTTCGGCGACGCGGAGAAGCACCGCGGCACGCGGCGTTCGCCCAAGGG CTGGCTGCGCCTGCAGGGCGTGTCGCGCAACAACCTGAAGGAAGTGGACGTCGACTTCCCGCTGGGCGTCCTCACCACGG TGACGGGGGTCTCCGGCTCCGGGAAGTCGAGCCTCGTGAGCCAGGTCCTGGTGGAGCTGGTGGCCGGACACCTGGGCCAC GCGGTGCCGGAGAACGAGGACGAGGGAGAGGAGCTGGAGCGCACGGTCATCCACACCACCGGCGGCAGGATTGCCTCCGG CATGGAGGGCATCAAGCGCCTGGTGCAGGTAGACCAGAAGCCCATTGGACGCACGCCGCGCTCCAACCTGGCGACGTACA CGGGGCTGTTCGACAACGTCCGCAAGCTCTTCGCCGCGACGCCCGCCGCACGCTCCCGGCGTTATGACGTGGGACGCTTC TCCTTCAACGTGGCCAAGGGCCGCTGCGAGACGTGCGAAGGTGAGGGCTTCGTCAGCGTGGAGCTGCTCTTCCTGCCCAG CGTCTACGCGCCGTGCCCCACGTGTCAGGGGGCCCGCTACAACGCCAAGACGCTGGAGATTCAGTACCGGGGCAAGAACA TCGCCGAGGTGCTGGGCATGACGGTGGACGCGGCCCACGACTTCTTCAGCGAGGACCCGCTGGTGCAGCGGCCGCTCGCC GTCCTGCGGGAGGTGGGGTTGGGATACCTGCGGCTGGGGCAGCCCGCGACGGAGTTGTCCGGCGGCGAGGCCCAACGCAT CAAGCTGGCCACGGAGCTTCAGCGGGCCCAGCGCGGCAGCTCGCTGTACGTGCTGGACGAACCCACCACGGGCCTGCACC CCTCCGACGTGGACAAGCTGATGACGCAGTTGGAGGGGCTGGTGGCCTCCGGCAACACCGTCATCCTCGTCGAGCACGAC ATGCGCGTGGTGGCCGCGAGCGACTGGGTCATCGACATGGGCCCGGGCGCTGGGGACAAGGGCGGGCGGGTGGTGGTGGC GGGCCCACCGGAGGAGGTGGTGGGCCTGCCCTACAGCCAGACCGCGCCCTTCCTGGAGGAGGCGCTGGGCTGA
Upstream 100 bases:
>100_bases AGCCCGGGGGCAGTGGCCCGTGTTCGCGCGTGTCTCCCACATCTGCCTCCGGTACAACGCCGCCGGAATTCATCCCTTCC GACAACTCAGCGTGGGGCGT
Downstream 100 bases:
>100_bases GCTTCCAGCGCCCGTCGGAGCCTCCGAGCCGTGGCCGTGAGGGCCGCCGGGCTCGGAGGTGGAGGCCGCGGAATCAGCGC GCCTGCGCCTGTGCCGCGGG
Product: UvrABC system protein A
Products: NA
Alternate protein names: UvrA protein; Excinuclease ABC subunit A [H]
Number of amino acids: Translated: 850; Mature: 849
Protein sequence:
>850_residues MARARRSKQQSDSSGTTEQGFVEVRGARQHNLKNVDVRIPRDAFVVFTGVSGSGKSSLAFGTLYAEAQRRYFESVAPYAR RLIDQAGVPEVDAIDGLPPAVALQQHRGAPTTRSSVGSVTTLANSLRLLYSRAGTYPRGQPHLDSDAFSPNTPAGACPKC HGLGRIYDATEKSMVPDDSLTIRERAIAAWPPAWHGQNLRDILVTLGYDVDRPWRELPKKDRDWILFTEEQPTVPVYAGF TPAETQRALKRKAAPSYMGTFTGARRYVLQTFATTQSALMKRRVSQYMVSGDCPECHGKRLRRESLSVTFAGLDIGELSR LPLSELTDLLAPVADGTAKDVAALARVHPEKALVAQRIAHDVLARVNVLTELGLGYLSLERGTPTLSPGELQRLRLATQV RSNLFGVVYVLDEPSAGLHPADTAALLKALDQLKGSGNSLFVVEHEVDVIRHADWIVDVGPDAGEQGGQILYSGPLEGLK AVKASRTRRYLFGDAEKHRGTRRSPKGWLRLQGVSRNNLKEVDVDFPLGVLTTVTGVSGSGKSSLVSQVLVELVAGHLGH AVPENEDEGEELERTVIHTTGGRIASGMEGIKRLVQVDQKPIGRTPRSNLATYTGLFDNVRKLFAATPAARSRRYDVGRF SFNVAKGRCETCEGEGFVSVELLFLPSVYAPCPTCQGARYNAKTLEIQYRGKNIAEVLGMTVDAAHDFFSEDPLVQRPLA VLREVGLGYLRLGQPATELSGGEAQRIKLATELQRAQRGSSLYVLDEPTTGLHPSDVDKLMTQLEGLVASGNTVILVEHD MRVVAASDWVIDMGPGAGDKGGRVVVAGPPEEVVGLPYSQTAPFLEEALG
Sequences:
>Translated_850_residues MARARRSKQQSDSSGTTEQGFVEVRGARQHNLKNVDVRIPRDAFVVFTGVSGSGKSSLAFGTLYAEAQRRYFESVAPYAR RLIDQAGVPEVDAIDGLPPAVALQQHRGAPTTRSSVGSVTTLANSLRLLYSRAGTYPRGQPHLDSDAFSPNTPAGACPKC HGLGRIYDATEKSMVPDDSLTIRERAIAAWPPAWHGQNLRDILVTLGYDVDRPWRELPKKDRDWILFTEEQPTVPVYAGF TPAETQRALKRKAAPSYMGTFTGARRYVLQTFATTQSALMKRRVSQYMVSGDCPECHGKRLRRESLSVTFAGLDIGELSR LPLSELTDLLAPVADGTAKDVAALARVHPEKALVAQRIAHDVLARVNVLTELGLGYLSLERGTPTLSPGELQRLRLATQV RSNLFGVVYVLDEPSAGLHPADTAALLKALDQLKGSGNSLFVVEHEVDVIRHADWIVDVGPDAGEQGGQILYSGPLEGLK AVKASRTRRYLFGDAEKHRGTRRSPKGWLRLQGVSRNNLKEVDVDFPLGVLTTVTGVSGSGKSSLVSQVLVELVAGHLGH AVPENEDEGEELERTVIHTTGGRIASGMEGIKRLVQVDQKPIGRTPRSNLATYTGLFDNVRKLFAATPAARSRRYDVGRF SFNVAKGRCETCEGEGFVSVELLFLPSVYAPCPTCQGARYNAKTLEIQYRGKNIAEVLGMTVDAAHDFFSEDPLVQRPLA VLREVGLGYLRLGQPATELSGGEAQRIKLATELQRAQRGSSLYVLDEPTTGLHPSDVDKLMTQLEGLVASGNTVILVEHD MRVVAASDWVIDMGPGAGDKGGRVVVAGPPEEVVGLPYSQTAPFLEEALG >Mature_849_residues ARARRSKQQSDSSGTTEQGFVEVRGARQHNLKNVDVRIPRDAFVVFTGVSGSGKSSLAFGTLYAEAQRRYFESVAPYARR LIDQAGVPEVDAIDGLPPAVALQQHRGAPTTRSSVGSVTTLANSLRLLYSRAGTYPRGQPHLDSDAFSPNTPAGACPKCH GLGRIYDATEKSMVPDDSLTIRERAIAAWPPAWHGQNLRDILVTLGYDVDRPWRELPKKDRDWILFTEEQPTVPVYAGFT PAETQRALKRKAAPSYMGTFTGARRYVLQTFATTQSALMKRRVSQYMVSGDCPECHGKRLRRESLSVTFAGLDIGELSRL PLSELTDLLAPVADGTAKDVAALARVHPEKALVAQRIAHDVLARVNVLTELGLGYLSLERGTPTLSPGELQRLRLATQVR SNLFGVVYVLDEPSAGLHPADTAALLKALDQLKGSGNSLFVVEHEVDVIRHADWIVDVGPDAGEQGGQILYSGPLEGLKA VKASRTRRYLFGDAEKHRGTRRSPKGWLRLQGVSRNNLKEVDVDFPLGVLTTVTGVSGSGKSSLVSQVLVELVAGHLGHA VPENEDEGEELERTVIHTTGGRIASGMEGIKRLVQVDQKPIGRTPRSNLATYTGLFDNVRKLFAATPAARSRRYDVGRFS FNVAKGRCETCEGEGFVSVELLFLPSVYAPCPTCQGARYNAKTLEIQYRGKNIAEVLGMTVDAAHDFFSEDPLVQRPLAV LREVGLGYLRLGQPATELSGGEAQRIKLATELQRAQRGSSLYVLDEPTTGLHPSDVDKLMTQLEGLVASGNTVILVEHDM RVVAASDWVIDMGPGAGDKGGRVVVAGPPEEVVGLPYSQTAPFLEEALG
Specific function: The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion h
COG id: COG0178
COG function: function code L; Excinuclease ATPase subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI2367343, Length=712, Percent_Identity=39.4662921348315, Blast_Score=503, Evalue=1e-143,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017871 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92214; Mature: 92083
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARARRSKQQSDSSGTTEQGFVEVRGARQHNLKNVDVRIPRDAFVVFTGVSGSGKSSLAF CCCCHHHHHCCCCCCCCCCCEEEECCCHHCCCCCCEEEECCCEEEEEECCCCCCCCCHHH GTLYAEAQRRYFESVAPYARRLIDQAGVPEVDAIDGLPPAVALQQHRGAPTTRSSVGSVT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHH TLANSLRLLYSRAGTYPRGQPHLDSDAFSPNTPAGACPKCHGLGRIYDATEKSMVPDDSL HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHCCCCCCCC TIRERAIAAWPPAWHGQNLRDILVTLGYDVDRPWRELPKKDRDWILFTEEQPTVPVYAGF HHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHCCCCCCCEEEEECCCCCCEEEECC TPAETQRALKRKAAPSYMGTFTGARRYVLQTFATTQSALMKRRVSQYMVSGDCPECHGKR CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LRRESLSVTFAGLDIGELSRLPLSELTDLLAPVADGTAKDVAALARVHPEKALVAQRIAH HHHHHCEEEEECCCHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHH DVLARVNVLTELGLGYLSLERGTPTLSPGELQRLRLATQVRSNLFGVVYVLDEPSAGLHP HHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCC ADTAALLKALDQLKGSGNSLFVVEHEVDVIRHADWIVDVGPDAGEQGGQILYSGPLEGLK CHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCEEEECCCCCCCCCCEEEECCCHHHHH AVKASRTRRYLFGDAEKHRGTRRSPKGWLRLQGVSRNNLKEVDVDFPLGVLTTVTGVSGS HHHHHHHHHHEECCHHHHCCCCCCCCCEEEEECCCCCCCEEECCCCCHHHHHHHCCCCCC GKSSLVSQVLVELVAGHLGHAVPENEDEGEELERTVIHTTGGRIASGMEGIKRLVQVDQK CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCC PIGRTPRSNLATYTGLFDNVRKLFAATPAARSRRYDVGRFSFNVAKGRCETCEGEGFVSV CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEE ELLFLPSVYAPCPTCQGARYNAKTLEIQYRGKNIAEVLGMTVDAAHDFFSEDPLVQRPLA EEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCHHHHHHHHCCCCCHHHHHHH VLREVGLGYLRLGQPATELSGGEAQRIKLATELQRAQRGSSLYVLDEPTTGLHPSDVDKL HHHHCCCCEEECCCCHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH MTQLEGLVASGNTVILVEHDMRVVAASDWVIDMGPGAGDKGGRVVVAGPPEEVVGLPYSQ HHHHHHHEECCCEEEEEECCCEEEEECCEEEECCCCCCCCCCEEEEECCCHHHCCCCCCC TAPFLEEALG CCHHHHHHCC >Mature Secondary Structure ARARRSKQQSDSSGTTEQGFVEVRGARQHNLKNVDVRIPRDAFVVFTGVSGSGKSSLAF CCCHHHHHCCCCCCCCCCCEEEECCCHHCCCCCCEEEECCCEEEEEECCCCCCCCCHHH GTLYAEAQRRYFESVAPYARRLIDQAGVPEVDAIDGLPPAVALQQHRGAPTTRSSVGSVT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHH TLANSLRLLYSRAGTYPRGQPHLDSDAFSPNTPAGACPKCHGLGRIYDATEKSMVPDDSL HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHCCCCCCCC TIRERAIAAWPPAWHGQNLRDILVTLGYDVDRPWRELPKKDRDWILFTEEQPTVPVYAGF HHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHCCCCCCCEEEEECCCCCCEEEECC TPAETQRALKRKAAPSYMGTFTGARRYVLQTFATTQSALMKRRVSQYMVSGDCPECHGKR CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LRRESLSVTFAGLDIGELSRLPLSELTDLLAPVADGTAKDVAALARVHPEKALVAQRIAH HHHHHCEEEEECCCHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHH DVLARVNVLTELGLGYLSLERGTPTLSPGELQRLRLATQVRSNLFGVVYVLDEPSAGLHP HHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCC ADTAALLKALDQLKGSGNSLFVVEHEVDVIRHADWIVDVGPDAGEQGGQILYSGPLEGLK CHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCEEEECCCCCCCCCCEEEECCCHHHHH AVKASRTRRYLFGDAEKHRGTRRSPKGWLRLQGVSRNNLKEVDVDFPLGVLTTVTGVSGS HHHHHHHHHHEECCHHHHCCCCCCCCCEEEEECCCCCCCEEECCCCCHHHHHHHCCCCCC GKSSLVSQVLVELVAGHLGHAVPENEDEGEELERTVIHTTGGRIASGMEGIKRLVQVDQK CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCC PIGRTPRSNLATYTGLFDNVRKLFAATPAARSRRYDVGRFSFNVAKGRCETCEGEGFVSV CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEE ELLFLPSVYAPCPTCQGARYNAKTLEIQYRGKNIAEVLGMTVDAAHDFFSEDPLVQRPLA EEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCHHHHHHHHCCCCCHHHHHHH VLREVGLGYLRLGQPATELSGGEAQRIKLATELQRAQRGSSLYVLDEPTTGLHPSDVDKL HHHHCCCCEEECCCCHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH MTQLEGLVASGNTVILVEHDMRVVAASDWVIDMGPGAGDKGGRVVVAGPPEEVVGLPYSQ HHHHHHHEECCCEEEEEECCCEEEEECCEEEECCCCCCCCCCEEEEECCCHHHCCCCCCC TAPFLEEALG CCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: Hydrolase; Acting on ester bonds [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8269961 [H]