| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762890
Identifier: 108762890
GI number: 108762890
Start: 4040347
End: 4042602
Strand: Reverse
Name: 108762890
Synonym: MXAN_3464
Alternate gene names: NA
Gene position: 4042602-4040347 (Counterclockwise)
Preceding gene: 108761888
Following gene: 108763716
Centisome position: 44.23
GC content: 59.22
Gene sequence:
>2256_bases GTGAAAGAGGACCCCTCCTGCATTAACGGGCGATCTTCCTCATTCTGTGCGGCGTTTCAGGGAAACCGCACGGACAGAAC CGTCTCATCGTGCTCCGGGACGATTCGTGCGCCCTCAATCCCATGCTCTCATCTGTCGCGGCCAACTCTTATTGAGCGAG GCCCTCTAGGAGCACCAATGCCGGTAACAACAAATGGTCACGATGTTCATTCAGAACTGACCGCTGTCCTCACCCCCATG GAGCAGGAACGCAATCGCCTTGCAGTCACAGGACGATCACTCACAGAGGAGGAGCAGCGGCGCCTCTCCCAGCTGAATCG TCTCGCTCCGCTCATCCGCAACGCCCTCGATGTGATTACCGAGGCCGAAACGGGCCTACAGCCGGCGCCAGTTCCGGAGG CCGTAGTCGCCACACTTCGCGACGGTCGCTACGATGGCGGCAACGGCGAGGTGGCGCTTGAATTGCGTGTCGATGGAGCG GGAAGCGGCGTCATCAGCGCCGACCTGTTCCGTGTGGACACAGCCGGCCGCCAGTACGTAGCGTCGATGCGCACCGCGCC CGGCATGCGTGTGAATCTGGGCGATGGCCGCTGGCCCATCGTGGGGCAAGACGAGGATTCTCGGAAGTCGACGGGAACGC TCACTCTCACTCGACAAAGCCCGCAGACCGATACGCTTGTGGGGATACTGCACTTCGAAGCCCCCCTCACCGGACTTCCC GTACGACGTGACTTGTCGTTCGTCGTGGAGCGCACTTCGGACAGTCTGCGCCACGTGGGCATCGAGATGGAAATCGAGGA TGATGTAGAACCGCCCAAGCCCCGTACGTTCGGTGATCGGGAAATTACGATCGAGACGGCGCTCGCCGATGCAGGCATCG AAACCTACGTGGCTGGTATGGCCAGCAAGATTCCCTCCAACCCCAATGGATGGGACAACGCCCAACTGCACGCGCTCATG AAGGATGTCGCACAGGCTTCGCTTCTGCGACGCGCGTGGGACTTACATCTGCTTATACTGTCGCGTTCGACAGACCAGGG ATTGCTGGGCATCATGTTCGACACGACGGACCCACTTCCACGCCAGGGAGCAGCCGTCTTCGCATCCGAGATTCGTGGCA TTCAGGGCATCGACCATGAGCGAAAGCTCATTCAAACAACCATCCACGAACTCGGGCACGCACTGAACCTGGCGCACCGC TTTGAGCGCACAGTAGGCCGTTCAGATTCCACCTCGTTCATGAACTACGATTGGCGCTTCAAGGGCGGAAGCCGGCGCGA CGAGTTCTGGTCGAAATTCCGTTATACCTTCGACGCCGACGAGCTTGAATTCCTGCGGCACGGCCCACTGGCTCCACTCA TTCCCGGAGGGGAACCGTTCCATTCCATCAATTACTGGGCAGACGGCTCCGGCGGCTACGCGCCGTACCTGCCCGAGGTA CCCATCGCCGACTTCAAGCTCGTGTTGAAGCCTCCCCAATCAGGCCCATTGTTCACGTTTGCACAGCCCGTTTTTCTCGA GGTCGAGCTGACGAATCAGACCGGTCGCCCCCTCGACATGCCGTCCTTTCTCCTCGACCCCAAAGCCGGCTTCCTAGAGA TCCTAATTCGTCGACACACTGGTCAATCGTCACGAGGGATTGATGGGGCACGCTCGTTCATCCCCGTCGTCCAGCGGTGC TTTGACCGAGGTGTTGCACATGCCGATCGTGTCCAGCCCGGTGGCTCAATGACGAACAACCTAAACCTGACGTACGGCTC TGGCGGATTCTCGTTTGCGGAGCCCGGAACGTACGAGGTGACGGCGGTGCTCGCCATAATGGATGAGTCGAACAATCGCG AACTCGTCGTGCGCTCGCAGCCTCTACGTATCCGAGTCGCAACGCCGAAATCCAACCTGGAGGAGAAAGACGCACTCGAT CTGCTGCGGGATGATGTCGGCCTTTACCTGGCCTTGGGTGGTTCGTCGGCGCTGCCCAAAGTAGCGGACCGCCTAGACGA AGTGGTCAATCGGCGCCGTGAAAAAATGGGCACGTCCGACCCAGTAACCGCAAGCATTATCCGAGCCAAAGCCATTGATG CACAGCGGCCATACATCCGCCTAATCGACGGAAAGTTCAAGCGGCAAGCCGGAAATCCGAACGAGGCGGCGAAACTCCTC AAGAGCCTCGACGATAAGGCGTTGGAAAATTTCGATTCGACAACCATCACTGGGACTCGACAGCTGCTCTCAAAAATACA CAACACCGCAGGCTAA
Upstream 100 bases:
>100_bases ATTAGAACGATTCGCCTGACGGGTCATCACGAAGTGTGGTGCCACGCGAAATGGGGCACCTCCGCAAAGCGAGGCAACAA GACCATTCCCGTTTTTCTCT
Downstream 100 bases:
>100_bases TTCTCTGACTGGGTGATTCTGGTGGGGCGTACACGAAGCGCTCCCAACCCTTCGGCGCGATAACCGCCAGCGGATTCGGA ACCGCTGGCGGTTGGCCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 751; Mature: 751
Protein sequence:
>751_residues MKEDPSCINGRSSSFCAAFQGNRTDRTVSSCSGTIRAPSIPCSHLSRPTLIERGPLGAPMPVTTNGHDVHSELTAVLTPM EQERNRLAVTGRSLTEEEQRRLSQLNRLAPLIRNALDVITEAETGLQPAPVPEAVVATLRDGRYDGGNGEVALELRVDGA GSGVISADLFRVDTAGRQYVASMRTAPGMRVNLGDGRWPIVGQDEDSRKSTGTLTLTRQSPQTDTLVGILHFEAPLTGLP VRRDLSFVVERTSDSLRHVGIEMEIEDDVEPPKPRTFGDREITIETALADAGIETYVAGMASKIPSNPNGWDNAQLHALM KDVAQASLLRRAWDLHLLILSRSTDQGLLGIMFDTTDPLPRQGAAVFASEIRGIQGIDHERKLIQTTIHELGHALNLAHR FERTVGRSDSTSFMNYDWRFKGGSRRDEFWSKFRYTFDADELEFLRHGPLAPLIPGGEPFHSINYWADGSGGYAPYLPEV PIADFKLVLKPPQSGPLFTFAQPVFLEVELTNQTGRPLDMPSFLLDPKAGFLEILIRRHTGQSSRGIDGARSFIPVVQRC FDRGVAHADRVQPGGSMTNNLNLTYGSGGFSFAEPGTYEVTAVLAIMDESNNRELVVRSQPLRIRVATPKSNLEEKDALD LLRDDVGLYLALGGSSALPKVADRLDEVVNRRREKMGTSDPVTASIIRAKAIDAQRPYIRLIDGKFKRQAGNPNEAAKLL KSLDDKALENFDSTTITGTRQLLSKIHNTAG
Sequences:
>Translated_751_residues MKEDPSCINGRSSSFCAAFQGNRTDRTVSSCSGTIRAPSIPCSHLSRPTLIERGPLGAPMPVTTNGHDVHSELTAVLTPM EQERNRLAVTGRSLTEEEQRRLSQLNRLAPLIRNALDVITEAETGLQPAPVPEAVVATLRDGRYDGGNGEVALELRVDGA GSGVISADLFRVDTAGRQYVASMRTAPGMRVNLGDGRWPIVGQDEDSRKSTGTLTLTRQSPQTDTLVGILHFEAPLTGLP VRRDLSFVVERTSDSLRHVGIEMEIEDDVEPPKPRTFGDREITIETALADAGIETYVAGMASKIPSNPNGWDNAQLHALM KDVAQASLLRRAWDLHLLILSRSTDQGLLGIMFDTTDPLPRQGAAVFASEIRGIQGIDHERKLIQTTIHELGHALNLAHR FERTVGRSDSTSFMNYDWRFKGGSRRDEFWSKFRYTFDADELEFLRHGPLAPLIPGGEPFHSINYWADGSGGYAPYLPEV PIADFKLVLKPPQSGPLFTFAQPVFLEVELTNQTGRPLDMPSFLLDPKAGFLEILIRRHTGQSSRGIDGARSFIPVVQRC FDRGVAHADRVQPGGSMTNNLNLTYGSGGFSFAEPGTYEVTAVLAIMDESNNRELVVRSQPLRIRVATPKSNLEEKDALD LLRDDVGLYLALGGSSALPKVADRLDEVVNRRREKMGTSDPVTASIIRAKAIDAQRPYIRLIDGKFKRQAGNPNEAAKLL KSLDDKALENFDSTTITGTRQLLSKIHNTAG >Mature_751_residues MKEDPSCINGRSSSFCAAFQGNRTDRTVSSCSGTIRAPSIPCSHLSRPTLIERGPLGAPMPVTTNGHDVHSELTAVLTPM EQERNRLAVTGRSLTEEEQRRLSQLNRLAPLIRNALDVITEAETGLQPAPVPEAVVATLRDGRYDGGNGEVALELRVDGA GSGVISADLFRVDTAGRQYVASMRTAPGMRVNLGDGRWPIVGQDEDSRKSTGTLTLTRQSPQTDTLVGILHFEAPLTGLP VRRDLSFVVERTSDSLRHVGIEMEIEDDVEPPKPRTFGDREITIETALADAGIETYVAGMASKIPSNPNGWDNAQLHALM KDVAQASLLRRAWDLHLLILSRSTDQGLLGIMFDTTDPLPRQGAAVFASEIRGIQGIDHERKLIQTTIHELGHALNLAHR FERTVGRSDSTSFMNYDWRFKGGSRRDEFWSKFRYTFDADELEFLRHGPLAPLIPGGEPFHSINYWADGSGGYAPYLPEV PIADFKLVLKPPQSGPLFTFAQPVFLEVELTNQTGRPLDMPSFLLDPKAGFLEILIRRHTGQSSRGIDGARSFIPVVQRC FDRGVAHADRVQPGGSMTNNLNLTYGSGGFSFAEPGTYEVTAVLAIMDESNNRELVVRSQPLRIRVATPKSNLEEKDALD LLRDDVGLYLALGGSSALPKVADRLDEVVNRRREKMGTSDPVTASIIRAKAIDAQRPYIRLIDGKFKRQAGNPNEAAKLL KSLDDKALENFDSTTITGTRQLLSKIHNTAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82395; Mature: 82395
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEDPSCINGRSSSFCAAFQGNRTDRTVSSCSGTIRAPSIPCSHLSRPTLIERGPLGAPM CCCCCCCCCCCCCCEEEEECCCCCCHHHHHCCCCEECCCCCHHHCCCCCEEECCCCCCCC PVTTNGHDVHSELTAVLTPMEQERNRLAVTGRSLTEEEQRRLSQLNRLAPLIRNALDVIT CCCCCCCHHHHHHHHHHCCHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EAETGLQPAPVPEAVVATLRDGRYDGGNGEVALELRVDGAGSGVISADLFRVDTAGRQYV HHHCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCEEEHEEEECCCHHHHH ASMRTAPGMRVNLGDGRWPIVGQDEDSRKSTGTLTLTRQSPQTDTLVGILHFEAPLTGLP HHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCC VRRDLSFVVERTSDSLRHVGIEMEIEDDVEPPKPRTFGDREITIETALADAGIETYVAGM CHHHHHHHHHHHCCHHHHCCEEEEECCCCCCCCCCCCCCCEEEEEEHHHHCCHHHHHHHH ASKIPSNPNGWDNAQLHALMKDVAQASLLRRAWDLHLLILSRSTDQGLLGIMFDTTDPLP HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCEEEEEECCCCCCC RQGAAVFASEIRGIQGIDHERKLIQTTIHELGHALNLAHRFERTVGRSDSTSFMNYDWRF CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE KGGSRRDEFWSKFRYTFDADELEFLRHGPLAPLIPGGEPFHSINYWADGSGGYAPYLPEV CCCCCHHHHHHHHCEEECCHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC PIADFKLVLKPPQSGPLFTFAQPVFLEVELTNQTGRPLDMPSFLLDPKAGFLEILIRRHT CCCCEEEEEECCCCCCEEEECCCEEEEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHCC GQSSRGIDGARSFIPVVQRCFDRGVAHADRVQPGGSMTNNLNLTYGSGGFSFAEPGTYEV CCCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCEEEEECCCCCCCCCCCCEEE TAVLAIMDESNNRELVVRSQPLRIRVATPKSNLEEKDALDLLRDDVGLYLALGGSSALPK EEEEEEEECCCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHH VADRLDEVVNRRREKMGTSDPVTASIIRAKAIDAQRPYIRLIDGKFKRQAGNPNEAAKLL HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHCCCCHHHHHHHH KSLDDKALENFDSTTITGTRQLLSKIHNTAG HHHHHHHHHCCCCCEEHHHHHHHHHHHHCCC >Mature Secondary Structure MKEDPSCINGRSSSFCAAFQGNRTDRTVSSCSGTIRAPSIPCSHLSRPTLIERGPLGAPM CCCCCCCCCCCCCCEEEEECCCCCCHHHHHCCCCEECCCCCHHHCCCCCEEECCCCCCCC PVTTNGHDVHSELTAVLTPMEQERNRLAVTGRSLTEEEQRRLSQLNRLAPLIRNALDVIT CCCCCCCHHHHHHHHHHCCHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EAETGLQPAPVPEAVVATLRDGRYDGGNGEVALELRVDGAGSGVISADLFRVDTAGRQYV HHHCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCEEEHEEEECCCHHHHH ASMRTAPGMRVNLGDGRWPIVGQDEDSRKSTGTLTLTRQSPQTDTLVGILHFEAPLTGLP HHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCC VRRDLSFVVERTSDSLRHVGIEMEIEDDVEPPKPRTFGDREITIETALADAGIETYVAGM CHHHHHHHHHHHCCHHHHCCEEEEECCCCCCCCCCCCCCCEEEEEEHHHHCCHHHHHHHH ASKIPSNPNGWDNAQLHALMKDVAQASLLRRAWDLHLLILSRSTDQGLLGIMFDTTDPLP HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCEEEEEECCCCCCC RQGAAVFASEIRGIQGIDHERKLIQTTIHELGHALNLAHRFERTVGRSDSTSFMNYDWRF CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE KGGSRRDEFWSKFRYTFDADELEFLRHGPLAPLIPGGEPFHSINYWADGSGGYAPYLPEV CCCCCHHHHHHHHCEEECCHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC PIADFKLVLKPPQSGPLFTFAQPVFLEVELTNQTGRPLDMPSFLLDPKAGFLEILIRRHT CCCCEEEEEECCCCCCEEEECCCEEEEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHCC GQSSRGIDGARSFIPVVQRCFDRGVAHADRVQPGGSMTNNLNLTYGSGGFSFAEPGTYEV CCCCCCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCEEEEECCCCCCCCCCCCEEE TAVLAIMDESNNRELVVRSQPLRIRVATPKSNLEEKDALDLLRDDVGLYLALGGSSALPK EEEEEEEECCCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHH VADRLDEVVNRRREKMGTSDPVTASIIRAKAIDAQRPYIRLIDGKFKRQAGNPNEAAKLL HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHCCCCHHHHHHHH KSLDDKALENFDSTTITGTRQLLSKIHNTAG HHHHHHHHHCCCCCEEHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA