| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762164
Identifier: 108762164
GI number: 108762164
Start: 6908907
End: 6909548
Strand: Reverse
Name: 108762164
Synonym: MXAN_5558
Alternate gene names: NA
Gene position: 6909548-6908907 (Counterclockwise)
Preceding gene: 108760078
Following gene: 108762977
Centisome position: 75.6
GC content: 70.09
Gene sequence:
>642_bases ATGAAAGACGCCTCGACTCGCTTCTCTTGTCGTGCCCTGACCGCTGCCTGGATGGGCCCGCTGGCCGCGCTCTCCCTGGC GGGCTGTAGCGGCCCGGTGAACAACCAGCAGGGCTACATGCCCGAGCAGCCCGTGGCCTTCTCCCACGCCGTCCACGCCG GGCAGTACGGCCTGGATTGTCAGTACTGCCACGTGGGCGCGGAGAAGAGCCGCCACGCCGGCGTGCCCTCCACCAGCGTG TGCATGAACTGCCACACGCAGGTGAAGACGGACTCGCCCGAAATCCAGAAGGTCGCGGCCGCGGTGGCGGAGAACAAGCC GCTGGCGTGGGTGCGCATCCACCGCCTGCCGGACCACGCGTACTTCAACCACGCCAGCCACGTGGGCGCGGGCCTGGACT GCCAGACGTGCCACGGGCCCGTGCAGGAGATGGTGCGCGTGGAGCAGAAGGAGCCCATGACGATGGGCTGGTGCCTGGAT TGCCACCGCGACACGGCGGCGAAGCAGGTGTCCGCGCCGCCGCCTTCCGCGCCCCGCGCTGGAGAGCTGCTGGCCCTGTC GTCCGGCGCACCCGCACCGGAGCCATTGAAGGCCCCTCGAATCCTGCAGCCCCCCACGGACTGCTCGAGCTGCCACCGCT GA
Upstream 100 bases:
>100_bases GCTGGCTCTCTTCATCCGCGCGCGGCCCGAGCCCATCACCGCGCCCCTGCTCGTCACGCCTCGGGAGGAGACCGCCCGCT GACGCGGCGGCACACCCGTC
Downstream 100 bases:
>100_bases GGAGTCCCATCCATGTCCGACCCACTTCCCAAGTATTGGCAGAGCCTGGCGGAGCGCGCTGGCGACCTTGGCGCGCTCGC ACAGACGCAGGACGAATTCG
Product: putative cytochrome c
Products: NA
Alternate protein names: Cytochrome C; Cytochrome C Family Protein; Cytochrome C Class I; Cytochrome C Class III Family Protein; Cytochrome C Domain-Containing Protein; Cytochrome C Mono- And Diheme Variant; Molybdopterin Oxidoreductase Subunit; Lipoprotein Cytochrome C; Multiheme Cytochrome Domain Protein
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MKDASTRFSCRALTAAWMGPLAALSLAGCSGPVNNQQGYMPEQPVAFSHAVHAGQYGLDCQYCHVGAEKSRHAGVPSTSV CMNCHTQVKTDSPEIQKVAAAVAENKPLAWVRIHRLPDHAYFNHASHVGAGLDCQTCHGPVQEMVRVEQKEPMTMGWCLD CHRDTAAKQVSAPPPSAPRAGELLALSSGAPAPEPLKAPRILQPPTDCSSCHR
Sequences:
>Translated_213_residues MKDASTRFSCRALTAAWMGPLAALSLAGCSGPVNNQQGYMPEQPVAFSHAVHAGQYGLDCQYCHVGAEKSRHAGVPSTSV CMNCHTQVKTDSPEIQKVAAAVAENKPLAWVRIHRLPDHAYFNHASHVGAGLDCQTCHGPVQEMVRVEQKEPMTMGWCLD CHRDTAAKQVSAPPPSAPRAGELLALSSGAPAPEPLKAPRILQPPTDCSSCHR >Mature_213_residues MKDASTRFSCRALTAAWMGPLAALSLAGCSGPVNNQQGYMPEQPVAFSHAVHAGQYGLDCQYCHVGAEKSRHAGVPSTSV CMNCHTQVKTDSPEIQKVAAAVAENKPLAWVRIHRLPDHAYFNHASHVGAGLDCQTCHGPVQEMVRVEQKEPMTMGWCLD CHRDTAAKQVSAPPPSAPRAGELLALSSGAPAPEPLKAPRILQPPTDCSSCHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22767; Mature: 22767
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 8.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDASTRFSCRALTAAWMGPLAALSLAGCSGPVNNQQGYMPEQPVAFSHAVHAGQYGLDC CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCE QYCHVGAEKSRHAGVPSTSVCMNCHTQVKTDSPEIQKVAAAVAENKPLAWVRIHRLPDHA EEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCHH YFNHASHVGAGLDCQTCHGPVQEMVRVEQKEPMTMGWCLDCHRDTAAKQVSAPPPSAPRA HHCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHCCCCCCCCCCC GELLALSSGAPAPEPLKAPRILQPPTDCSSCHR CCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MKDASTRFSCRALTAAWMGPLAALSLAGCSGPVNNQQGYMPEQPVAFSHAVHAGQYGLDC CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCE QYCHVGAEKSRHAGVPSTSVCMNCHTQVKTDSPEIQKVAAAVAENKPLAWVRIHRLPDHA EEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCHH YFNHASHVGAGLDCQTCHGPVQEMVRVEQKEPMTMGWCLDCHRDTAAKQVSAPPPSAPRA HHCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHCCCCCCCCCCC GELLALSSGAPAPEPLKAPRILQPPTDCSSCHR CCEEEECCCCCCCCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA