| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762062
Identifier: 108762062
GI number: 108762062
Start: 4570375
End: 4571472
Strand: Reverse
Name: 108762062
Synonym: MXAN_3805
Alternate gene names: NA
Gene position: 4571472-4570375 (Counterclockwise)
Preceding gene: 108756813
Following gene: 108762728
Centisome position: 50.02
GC content: 66.67
Gene sequence:
>1098_bases GTGCGCAGAAGACCAGGAATCAGAAAGGCCCCGCCCAGGGACAAAGGTAGTCCCCGTCTTTCGCGGCTGCAGCGCCGCTC TCTCATCCGCTGGGGTGAAAGGAGCGGCTGCCCGCTCACCCTGCGGCGGTGCATGGCGGTGGTGGGAGTGTCGCGCGGCG AATCGTGCAGGCAGGTAGCGCGTGCTCTGGCGTGCGCCACCTCCACGGTCGTCTCCGCGGTCAATCGCTACCAGACGGGA CGGCGTAAAGCCCTGTTGGACCGCAGGGCGGCCAATGGCGAGGCGAAGGTGGATGAGCGCTTCCTCGCCATTCTCTCGCG CGTGCTGGCAGGTACTCCCGAAGAAGTGGGCTGGTGCCGCCCGACGTGGACACGGGAGTTGCTCGCGCTGGAAATGGAGC GCCGGGGCCTGGCGCGGGTGTCGGTTGCCACTATTGGCCGTGCGCTTGCCACCCTCGGTGCGAGCCTGAAGGCGGCCAAA CCCGTGGTGGGCTGCCCTTGGCCGGGCTGGAAGCGGCGCCGGCGTCTCTTCGAGTTGCGGTGCCTGGAAGCCTGTGCCCG GTCCGACGAGCCGGTCCTCTACGTGGACGAGGTGGACATCCATCTCAATCCGAAGGTGGGACGCGACTGGTGCCTGCCCG GCCAGCGCCGGGTGGTGCTCACGCCAGGCAACAACAAGAAGCGATACCTGGCCGGCGCCCTGGACTCGAAGACGGGCCGC CTCATCTGGGTGGAGGACAAGTCGAAGGCCAGCTCACTCTTCATCCAACTGCTTTGGCGCATCGCCGGTGAGTACCCTGG CGCCCCACGAATCCACCTCATCCTGGACAACGCCTCCATCCACAGCAGCCAGAAGACGAGAAAGGCGCTCGAGAAACTCG GCGGCCGGATTGTCCTCCACTTCCTGCCGCCTTACTGCCCGGACGCCAATCGCATTGAGCGCGTCTGGCTGGACCTCCAC GCCAACGTCACTCGCAACCATCGCTGCCGCACCCTCCAGAAGCTCATGCGGCGCGTCCATGCCTACCTGCACGCTCGCAA CGTCCAGCGGCGTGCCAGTCCTATCCTCCGCATGGTCCATCTGCGACACGCCGCCTGA
Upstream 100 bases:
>100_bases GGTATCTAAACCACCGCTCGTGATTCTCGATCGGGGTTGGTGAGCGGGCGGGCGCGCGGGGCGACAGGAAGAGGCAGGGG CACATCCCGTTCGGCTCTGT
Downstream 100 bases:
>100_bases GCGCGTGCGAGATTCATGATCGGGCGTTTAGATACGTCAGGCGCAGTAAGAAGCTTTTTCCCGAAATTTTAGGTGCCACC ATTCCGAAGAGACTTAATCT
Product: IS630 family transposase
Products: NA
Alternate protein names: ISO-IS200 39 kDa protein [H]
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MRRRPGIRKAPPRDKGSPRLSRLQRRSLIRWGERSGCPLTLRRCMAVVGVSRGESCRQVARALACATSTVVSAVNRYQTG RRKALLDRRAANGEAKVDERFLAILSRVLAGTPEEVGWCRPTWTRELLALEMERRGLARVSVATIGRALATLGASLKAAK PVVGCPWPGWKRRRRLFELRCLEACARSDEPVLYVDEVDIHLNPKVGRDWCLPGQRRVVLTPGNNKKRYLAGALDSKTGR LIWVEDKSKASSLFIQLLWRIAGEYPGAPRIHLILDNASIHSSQKTRKALEKLGGRIVLHFLPPYCPDANRIERVWLDLH ANVTRNHRCRTLQKLMRRVHAYLHARNVQRRASPILRMVHLRHAA
Sequences:
>Translated_365_residues MRRRPGIRKAPPRDKGSPRLSRLQRRSLIRWGERSGCPLTLRRCMAVVGVSRGESCRQVARALACATSTVVSAVNRYQTG RRKALLDRRAANGEAKVDERFLAILSRVLAGTPEEVGWCRPTWTRELLALEMERRGLARVSVATIGRALATLGASLKAAK PVVGCPWPGWKRRRRLFELRCLEACARSDEPVLYVDEVDIHLNPKVGRDWCLPGQRRVVLTPGNNKKRYLAGALDSKTGR LIWVEDKSKASSLFIQLLWRIAGEYPGAPRIHLILDNASIHSSQKTRKALEKLGGRIVLHFLPPYCPDANRIERVWLDLH ANVTRNHRCRTLQKLMRRVHAYLHARNVQRRASPILRMVHLRHAA >Mature_365_residues MRRRPGIRKAPPRDKGSPRLSRLQRRSLIRWGERSGCPLTLRRCMAVVGVSRGESCRQVARALACATSTVVSAVNRYQTG RRKALLDRRAANGEAKVDERFLAILSRVLAGTPEEVGWCRPTWTRELLALEMERRGLARVSVATIGRALATLGASLKAAK PVVGCPWPGWKRRRRLFELRCLEACARSDEPVLYVDEVDIHLNPKVGRDWCLPGQRRVVLTPGNNKKRYLAGALDSKTGR LIWVEDKSKASSLFIQLLWRIAGEYPGAPRIHLILDNASIHSSQKTRKALEKLGGRIVLHFLPPYCPDANRIERVWLDLH ANVTRNHRCRTLQKLMRRVHAYLHARNVQRRASPILRMVHLRHAA
Specific function: Unknown
COG id: COG3335
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR001584 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 41430; Mature: 41430
Theoretical pI: Translated: 11.86; Mature: 11.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRPGIRKAPPRDKGSPRLSRLQRRSLIRWGERSGCPLTLRRCMAVVGVSRGESCRQVA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHH RALACATSTVVSAVNRYQTGRRKALLDRRAANGEAKVDERFLAILSRVLAGTPEEVGWCR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHCCCCC PTWTRELLALEMERRGLARVSVATIGRALATLGASLKAAKPVVGCPWPGWKRRRRLFELR CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHH CLEACARSDEPVLYVDEVDIHLNPKVGRDWCLPGQRRVVLTPGNNKKRYLAGALDSKTGR HHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCC LIWVEDKSKASSLFIQLLWRIAGEYPGAPRIHLILDNASIHSSQKTRKALEKLGGRIVLH EEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCEEEEE FLPPYCPDANRIERVWLDLHANVTRNHRCRTLQKLMRRVHAYLHARNVQRRASPILRMVH ECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRHAA HHHCC >Mature Secondary Structure MRRRPGIRKAPPRDKGSPRLSRLQRRSLIRWGERSGCPLTLRRCMAVVGVSRGESCRQVA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHH RALACATSTVVSAVNRYQTGRRKALLDRRAANGEAKVDERFLAILSRVLAGTPEEVGWCR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHCCCCC PTWTRELLALEMERRGLARVSVATIGRALATLGASLKAAKPVVGCPWPGWKRRRRLFELR CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHH CLEACARSDEPVLYVDEVDIHLNPKVGRDWCLPGQRRVVLTPGNNKKRYLAGALDSKTGR HHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCC LIWVEDKSKASSLFIQLLWRIAGEYPGAPRIHLILDNASIHSSQKTRKALEKLGGRIVLH EEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCEEEEE FLPPYCPDANRIERVWLDLHANVTRNHRCRTLQKLMRRVHAYLHARNVQRRASPILRMVH ECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRHAA HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2824781 [H]