| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108761802
Identifier: 108761802
GI number: 108761802
Start: 5474855
End: 5475346
Strand: Direct
Name: 108761802
Synonym: MXAN_4425
Alternate gene names: NA
Gene position: 5474855-5475346 (Clockwise)
Preceding gene: 108758683
Following gene: 108762972
Centisome position: 59.9
GC content: 68.7
Gene sequence:
>492_bases ATGCGTCTCCCGATTGTCAGCGCCGCACTCGCGCTCGCCGCCGCCGGCTGTGCCACCCCTGGCTTCGACAAGCTCTACCC GGGCATGTCGTCCCATCAGGTCGTCGATGCCATGGGCTCAGGACCCACGCGCGCGCAGGAGTTCCCGGACAGCTCCACCG CCTGGTACTACGGCGAGGACCGCTGCGTGCTGATGCGCGACGACAAGCTCGTCGCCAAGGCCACGTCCGAGGACTCCACC ACCATCAACACCCCCGTCGTCTCCGTGCGCGACACCTCGAAGGCCCTGTGCGCGCCAGAGGGCTACGCCTCCTCGGAGAA GCGGGAGCAGGTCATCGACACGCCGTTCGGCACCCTCAAGGGCAACATCGACCCGAAGGCCGCCATGGAGAAGGTGAAGG GTGTGGTGACGGGCAAGAGCGGTGACACCGCCCCCGCGAAGACGGGAGCCGCTCCCGCGGAGACGGAGCAGGCGTCGACG CCCACCCCGTAA
Upstream 100 bases:
>100_bases TCAGGAACTCTGACACGATGCGTCCGGCCCCCCACATGGAGGCCGGACGTGGCGCCGGGGTAGGCTCCGCGATTCCTTTT CGGAAGGAGCCCCACACCCC
Downstream 100 bases:
>100_bases GAAGCCGCATCGACACGGCACCCGGGGCCGGGATGCGGCCCCGGCGTCAGGCGGAAGGTGCCGCCGCCTCGCCGTCCTTG TCGTCCAGCTTGCCGGCGAT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MRLPIVSAALALAAAGCATPGFDKLYPGMSSHQVVDAMGSGPTRAQEFPDSSTAWYYGEDRCVLMRDDKLVAKATSEDST TINTPVVSVRDTSKALCAPEGYASSEKREQVIDTPFGTLKGNIDPKAAMEKVKGVVTGKSGDTAPAKTGAAPAETEQAST PTP
Sequences:
>Translated_163_residues MRLPIVSAALALAAAGCATPGFDKLYPGMSSHQVVDAMGSGPTRAQEFPDSSTAWYYGEDRCVLMRDDKLVAKATSEDST TINTPVVSVRDTSKALCAPEGYASSEKREQVIDTPFGTLKGNIDPKAAMEKVKGVVTGKSGDTAPAKTGAAPAETEQAST PTP >Mature_163_residues MRLPIVSAALALAAAGCATPGFDKLYPGMSSHQVVDAMGSGPTRAQEFPDSSTAWYYGEDRCVLMRDDKLVAKATSEDST TINTPVVSVRDTSKALCAPEGYASSEKREQVIDTPFGTLKGNIDPKAAMEKVKGVVTGKSGDTAPAKTGAAPAETEQAST PTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16940; Mature: 16940
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLPIVSAALALAAAGCATPGFDKLYPGMSSHQVVDAMGSGPTRAQEFPDSSTAWYYGED CCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHCCCCCCHHHCCCCCCEEEECCC RCVLMRDDKLVAKATSEDSTTINTPVVSVRDTSKALCAPEGYASSEKREQVIDTPFGTLK EEEEEECCCEEEEECCCCCCEECCCEEEECCCCCCEECCCCCCCCHHHHHHHCCCCCCEE GNIDPKAAMEKVKGVVTGKSGDTAPAKTGAAPAETEQASTPTP CCCCHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRLPIVSAALALAAAGCATPGFDKLYPGMSSHQVVDAMGSGPTRAQEFPDSSTAWYYGED CCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHCCCCCCHHHCCCCCCEEEECCC RCVLMRDDKLVAKATSEDSTTINTPVVSVRDTSKALCAPEGYASSEKREQVIDTPFGTLK EEEEEECCCEEEEECCCCCCEECCCEEEECCCCCCEECCCCCCCCHHHHHHHCCCCCCEE GNIDPKAAMEKVKGVVTGKSGDTAPAKTGAAPAETEQASTPTP CCCCHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA