Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
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Accession | NC_008095 |
Length | 9,139,763 |
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The map label for this gene is dnaA [H]
Identifier: 108761581
GI number: 108761581
Start: 87
End: 1439
Strand: Direct
Name: dnaA [H]
Synonym: MXAN_0001
Alternate gene names: 108761581
Gene position: 87-1439 (Clockwise)
Preceding gene: NA
Following gene: 108764057
Centisome position: 0.0
GC content: 65.85
Gene sequence:
>1353_bases GTGAACGCCCTCGCCCAAGCCGCTACCCCCCTCCCAAGTGCTGGAATTCTCTGGGCTCGGATGCTGGATGCCATCCGCCA GGAGAAGTTCGACTACGCGCTGAGATGGCTGGAGCGGATGCGCCCGCTGGAGGTGCGTGACGGTGCCCTGGTGATGGGCG TTCCGGACCGCTTCTTCCGCGACTGGGTGGATGACCACTACCGCCCCATGCTGGATGTCCAGCTCGCACGGATGGGGGAG GGCCTGACCTCCATCGCCTATGAGGTAGTGGAGGGCCTGGAGCCGGACCCGCATTTTCCACCCACACCCTCAGTCAAGGC GAGCGCCACGCGTCCGGGCCGGCTGAACGCGCGCTTCACCTTCGACACCTTCGTGGTGGCGGACAGCAACCAGCTCCCGG CCGCCGCGGCGCAGGCCGTGGCCGACAAGCCGGGCCACCACTACAACCCGCTCTACATCTACGGCGGCACGGGTCTGGGC AAGACGCACCTGCTCCAGGCAGTGGGCAACCTCATCTGGGAGCGAGATCCATCCCAGCGCGTGGTGTTCCTCTCCAGCGA GCAGTTCACCAACGAGTACGTGGAGAGCGTCCGCGAGCACCGCATGGGGGACTTCCGCCGGAAGTTCCGTGAGGAGTGCG ACGTGCTCCTCCTCGACGACATCCAGTTCCTCGGCAAGCGTGAGGAGACGCAGAAGGAGTTCTTCTACACCTTCAACACG CTCTACGAGATGAACAAGGCCATCGTCCTCACCAGCGACACCGTGCCCGCGGAGATTCCGGGCCTGGAGGACCGGCTGCG CAGCCGCTTCGCCATGGGGCTGATGACGGACATCCGCGAGCCCACCTACGAGACGCGGGTGGCCATCCTCCAGAAGAAGG CCGTGGCCGAAGGTCTGGACCTGCCGGACTCGGTGGCGCACTTCATCGCCAAGCACATCCAGAAGAACGTGCGCGAGTTG GAAGGCGCGCTGGTGAAGCTGTCCGCGGTGCACAGCCTGACGCGCCAGCCCGTGACGGAGGACTTCGCGTCCCAGGTGCT GCGCGACATCCTCCCCGCCCACAGCGCGGTGGACGTGGAGGCCATCCAGCGCGAGGTGGCCCGCTTCTACAAAGTCACGG TGGAGTCGCTGAAGGAAGACCGCCGGCACAAGGCCCTGGCCCATGCGCGCCAGGTGGCCATGTACCTCAGCCGCAAGCTG ACGAAGAGCTCCTTCCCGGAAATCGCCGCGCGCTTCAGCAAGGACCACTCCACCGTCATCTCCGCGGTTCGCAAGGTGGA AGGCCTCCGCGTGACGGATGCCACCGTGCAGCGTGAGTTGGCGGAGCTGGAATTGAAGCTCGGCAATCCCTGA
Upstream 100 bases:
>100_bases GCTACGGCGGTTTTGGCCGGTTGCTTGATCCACCAGGAACCGTCTGTTAGCACCGCCGAACGCCTCGTTTTCCCCCTGCT CCTGCACGTTTGAGTCCCGC
Downstream 100 bases:
>100_bases AACAGCCGTACCTTTGTTTCATGTCGGACGACACGCGCCCGCGTGAAACGGGCCGTGTCCGGCTGACGCGCAACCAGGAT TGACGCTCGGGCGCGTATGC
Product: chromosomal replication initiator protein DnaA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MNALAQAATPLPSAGILWARMLDAIRQEKFDYALRWLERMRPLEVRDGALVMGVPDRFFRDWVDDHYRPMLDVQLARMGE GLTSIAYEVVEGLEPDPHFPPTPSVKASATRPGRLNARFTFDTFVVADSNQLPAAAAQAVADKPGHHYNPLYIYGGTGLG KTHLLQAVGNLIWERDPSQRVVFLSSEQFTNEYVESVREHRMGDFRRKFREECDVLLLDDIQFLGKREETQKEFFYTFNT LYEMNKAIVLTSDTVPAEIPGLEDRLRSRFAMGLMTDIREPTYETRVAILQKKAVAEGLDLPDSVAHFIAKHIQKNVREL EGALVKLSAVHSLTRQPVTEDFASQVLRDILPAHSAVDVEAIQREVARFYKVTVESLKEDRRHKALAHARQVAMYLSRKL TKSSFPEIAARFSKDHSTVISAVRKVEGLRVTDATVQRELAELELKLGNP
Sequences:
>Translated_450_residues MNALAQAATPLPSAGILWARMLDAIRQEKFDYALRWLERMRPLEVRDGALVMGVPDRFFRDWVDDHYRPMLDVQLARMGE GLTSIAYEVVEGLEPDPHFPPTPSVKASATRPGRLNARFTFDTFVVADSNQLPAAAAQAVADKPGHHYNPLYIYGGTGLG KTHLLQAVGNLIWERDPSQRVVFLSSEQFTNEYVESVREHRMGDFRRKFREECDVLLLDDIQFLGKREETQKEFFYTFNT LYEMNKAIVLTSDTVPAEIPGLEDRLRSRFAMGLMTDIREPTYETRVAILQKKAVAEGLDLPDSVAHFIAKHIQKNVREL EGALVKLSAVHSLTRQPVTEDFASQVLRDILPAHSAVDVEAIQREVARFYKVTVESLKEDRRHKALAHARQVAMYLSRKL TKSSFPEIAARFSKDHSTVISAVRKVEGLRVTDATVQRELAELELKLGNP >Mature_450_residues MNALAQAATPLPSAGILWARMLDAIRQEKFDYALRWLERMRPLEVRDGALVMGVPDRFFRDWVDDHYRPMLDVQLARMGE GLTSIAYEVVEGLEPDPHFPPTPSVKASATRPGRLNARFTFDTFVVADSNQLPAAAAQAVADKPGHHYNPLYIYGGTGLG KTHLLQAVGNLIWERDPSQRVVFLSSEQFTNEYVESVREHRMGDFRRKFREECDVLLLDDIQFLGKREETQKEFFYTFNT LYEMNKAIVLTSDTVPAEIPGLEDRLRSRFAMGLMTDIREPTYETRVAILQKKAVAEGLDLPDSVAHFIAKHIQKNVREL EGALVKLSAVHSLTRQPVTEDFASQVLRDILPAHSAVDVEAIQREVARFYKVTVESLKEDRRHKALAHARQVAMYLSRKL TKSSFPEIAARFSKDHSTVISAVRKVEGLRVTDATVQRELAELELKLGNP
Specific function: Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box):5'-TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phosph
COG id: COG0593
COG function: function code L; ATPase involved in DNA replication initiation
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dnaA family [H]
Homologues:
Organism=Escherichia coli, GI2367267, Length=466, Percent_Identity=41.4163090128755, Blast_Score=325, Evalue=3e-90,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR001957 - InterPro: IPR020591 - InterPro: IPR018312 - InterPro: IPR013159 - InterPro: IPR013317 - InterPro: IPR010921 [H]
Pfam domain/function: PF00308 Bac_DnaA; PF08299 Bac_DnaA_C [H]
EC number: NA
Molecular weight: Translated: 51012; Mature: 51012
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: PS01008 DNAA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNALAQAATPLPSAGILWARMLDAIRQEKFDYALRWLERMRPLEVRDGALVMGVPDRFFR CCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEECCCHHHHH DWVDDHYRPMLDVQLARMGEGLTSIAYEVVEGLEPDPHFPPTPSVKASATRPGRLNARFT HHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEE FDTFVVADSNQLPAAAAQAVADKPGHHYNPLYIYGGTGLGKTHLLQAVGNLIWERDPSQR EEEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCE VVFLSSEQFTNEYVESVREHRMGDFRRKFREECDVLLLDDIQFLGKREETQKEFFYTFNT EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHCCCHHHHHHHHHHHHH LYEMNKAIVLTSDTVPAEIPGLEDRLRSRFAMGLMTDIREPTYETRVAILQKKAVAEGLD HHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC LPDSVAHFIAKHIQKNVRELEGALVKLSAVHSLTRQPVTEDFASQVLRDILPAHSAVDVE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHH AIQREVARFYKVTVESLKEDRRHKALAHARQVAMYLSRKLTKSSFPEIAARFSKDHSTVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHH SAVRKVEGLRVTDATVQRELAELELKLGNP HHHHHHCCCEEHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNALAQAATPLPSAGILWARMLDAIRQEKFDYALRWLERMRPLEVRDGALVMGVPDRFFR CCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEECCCHHHHH DWVDDHYRPMLDVQLARMGEGLTSIAYEVVEGLEPDPHFPPTPSVKASATRPGRLNARFT HHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEE FDTFVVADSNQLPAAAAQAVADKPGHHYNPLYIYGGTGLGKTHLLQAVGNLIWERDPSQR EEEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCE VVFLSSEQFTNEYVESVREHRMGDFRRKFREECDVLLLDDIQFLGKREETQKEFFYTFNT EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHCCCHHHHHHHHHHHHH LYEMNKAIVLTSDTVPAEIPGLEDRLRSRFAMGLMTDIREPTYETRVAILQKKAVAEGLD HHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC LPDSVAHFIAKHIQKNVRELEGALVKLSAVHSLTRQPVTEDFASQVLRDILPAHSAVDVE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHH AIQREVARFYKVTVESLKEDRRHKALAHARQVAMYLSRKLTKSSFPEIAARFSKDHSTVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHH SAVRKVEGLRVTDATVQRELAELELKLGNP HHHHHHCCCEEHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA