| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yfiS [H]
Identifier: 108761473
GI number: 108761473
Start: 5653906
End: 5655273
Strand: Direct
Name: yfiS [H]
Synonym: MXAN_4533
Alternate gene names: 108761473
Gene position: 5653906-5655273 (Clockwise)
Preceding gene: 108763626
Following gene: 108760660
Centisome position: 61.86
GC content: 69.44
Gene sequence:
>1368_bases ATGGCATTCTCAAGCAGGAACGTCGTCACGAACCCTGCCCGGGTCTTCAGTCTCATCTGGCTGGGTCAGCTCATCTCGTC ACTGGGGACGGGACTCACCCAGTTCTCGGTGGGTGTCTACGTCTACCAGAACAGCGATTCCGTCACGGAGTACTCGCTGG CGTCGTTCTTCGGGTTCCTCCCGATGGTGCTGCTCGCGCCCGTCGCGGGCTCCATGGTGGACCGCAGCAACCGTCAGCGG GTGATGCTGCTGGCGGACCTGGGCGCGATGACAGCCATCGGGTTGATGTGGTGCTTTGTCGCGGCGGACCGCGCCGGGCT GTGGCCCCTTCAAAACTGGCACTTCTATCCCCCCCTGGCGATGAGCGCCGCCTTCAGCACCTTCCGCGTCCTGGCCTTCT CCACGGCCACGCCCCTGCTGGTCTCCAAGCAGAACCTGGGCCGGGCCAACGGCATGGTGGAACTGGCCATGAGCGCGGGC CAGCTCCTGGGCCCCGCGATGGCGGGCGTGCTGGTGGTGCGCATGGGCTTGCAAGGCGTGCTGCTCATCGACCTGGCGAC CTTCCTCTTCGCGGTGGCCACGCTGCTGAGCGTGCGCATCCCCCAGCCCGAACCGGACGCCGCGCGGACCGAGCCCAGGA AGTCGCTGTGGACGGACATCGCGCTGGGCTGGCGCTTCATCCGCGAGCGCCCCGGCCTGCTCGGATTGCTGGGCTTCAGC TCCGCCGTCAACCTGATCACCGTACTGGTGACGGTGCTCATCACCCCGCTGGTGTTGAGCTTCACGGACCCGACGACACT GGGCCTGGTGGTGTCCTGCTCCGGCGTCGGCATGGTGGCGGGTGGAATCACCATGGGCGTCTGGGGCGGCCCGAAGCGGC GCATCCTGGGCGTGCTGGGCGCGGAGCTCGTCGCGGGCGTGGCATTGCTGGCCGCGGCGCTCCCCGCCAGCGTGTTCGTC GTCGCCTGCGCCGCCTTCGTGTTCATGTTCACCGCGCCGGTGGCCATGGGCTGCTCGCAGGCCATCTGGCAGAGCAAGGT GCCTCCCGCCATCCAGGGACGGGTGTTCGCCACGCGCCGGATGCTCGCGCTGGTCGCCCCGCCCGTCGCCGCGCTGCTCG CGGGCCCGTTGACGGACAAGGTCTTCGACCCCTGGATGGCGCCGGACGGCGCCCTGGCCAACACCTTCGGCCAGGTGCTG GGCACCGGCCCGGGTCGAGGCATCGCCCTGCTCTACGTCGTCCTGGGCCTCCTGCTGGCGGGCTGCGTCATGCTGACCGC GTCCTCCCCGCGCGTGCGCGGCGTGGAAGACGAGCTCCCAGACGCGTTGCTGCCCCAGGGTCTCCCCGCGGCGCAACAAC AAGCCTGA
Upstream 100 bases:
>100_bases GAACGCGGTATCCAGGTAGACGTCCTGGCCGTGCTCACGAAGACTCTAGCCATGCATCTGACACCGAGCGGCGCACGCCC GCGGAAGGCCCGCTGACGGC
Downstream 100 bases:
>100_bases GCCGCCGCGGCGCGTCCGCTGGTCAACGCTTCGCGCCCAGCGGCACTGTCAGCTTATTCTTGATTTACAGACTGCCGTAC AGTCCTTGCGGCTCCGGCCC
Product: major facilitator family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MAFSSRNVVTNPARVFSLIWLGQLISSLGTGLTQFSVGVYVYQNSDSVTEYSLASFFGFLPMVLLAPVAGSMVDRSNRQR VMLLADLGAMTAIGLMWCFVAADRAGLWPLQNWHFYPPLAMSAAFSTFRVLAFSTATPLLVSKQNLGRANGMVELAMSAG QLLGPAMAGVLVVRMGLQGVLLIDLATFLFAVATLLSVRIPQPEPDAARTEPRKSLWTDIALGWRFIRERPGLLGLLGFS SAVNLITVLVTVLITPLVLSFTDPTTLGLVVSCSGVGMVAGGITMGVWGGPKRRILGVLGAELVAGVALLAAALPASVFV VACAAFVFMFTAPVAMGCSQAIWQSKVPPAIQGRVFATRRMLALVAPPVAALLAGPLTDKVFDPWMAPDGALANTFGQVL GTGPGRGIALLYVVLGLLLAGCVMLTASSPRVRGVEDELPDALLPQGLPAAQQQA
Sequences:
>Translated_455_residues MAFSSRNVVTNPARVFSLIWLGQLISSLGTGLTQFSVGVYVYQNSDSVTEYSLASFFGFLPMVLLAPVAGSMVDRSNRQR VMLLADLGAMTAIGLMWCFVAADRAGLWPLQNWHFYPPLAMSAAFSTFRVLAFSTATPLLVSKQNLGRANGMVELAMSAG QLLGPAMAGVLVVRMGLQGVLLIDLATFLFAVATLLSVRIPQPEPDAARTEPRKSLWTDIALGWRFIRERPGLLGLLGFS SAVNLITVLVTVLITPLVLSFTDPTTLGLVVSCSGVGMVAGGITMGVWGGPKRRILGVLGAELVAGVALLAAALPASVFV VACAAFVFMFTAPVAMGCSQAIWQSKVPPAIQGRVFATRRMLALVAPPVAALLAGPLTDKVFDPWMAPDGALANTFGQVL GTGPGRGIALLYVVLGLLLAGCVMLTASSPRVRGVEDELPDALLPQGLPAAQQQA >Mature_454_residues AFSSRNVVTNPARVFSLIWLGQLISSLGTGLTQFSVGVYVYQNSDSVTEYSLASFFGFLPMVLLAPVAGSMVDRSNRQRV MLLADLGAMTAIGLMWCFVAADRAGLWPLQNWHFYPPLAMSAAFSTFRVLAFSTATPLLVSKQNLGRANGMVELAMSAGQ LLGPAMAGVLVVRMGLQGVLLIDLATFLFAVATLLSVRIPQPEPDAARTEPRKSLWTDIALGWRFIRERPGLLGLLGFSS AVNLITVLVTVLITPLVLSFTDPTTLGLVVSCSGVGMVAGGITMGVWGGPKRRILGVLGAELVAGVALLAAALPASVFVV ACAAFVFMFTAPVAMGCSQAIWQSKVPPAIQGRVFATRRMLALVAPPVAALLAGPLTDKVFDPWMAPDGALANTFGQVLG TGPGRGIALLYVVLGLLLAGCVMLTASSPRVRGVEDELPDALLPQGLPAAQQQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47783; Mature: 47652
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFSSRNVVTNPARVFSLIWLGQLISSLGTGLTQFSVGVYVYQNSDSVTEYSLASFFGFL CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEEEEEEEEECCCCCHHHHHHHHHHHH PMVLLAPVAGSMVDRSNRQRVMLLADLGAMTAIGLMWCFVAADRAGLWPLQNWHFYPPLA HHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH MSAAFSTFRVLAFSTATPLLVSKQNLGRANGMVELAMSAGQLLGPAMAGVLVVRMGLQGV HHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LLIDLATFLFAVATLLSVRIPQPEPDAARTEPRKSLWTDIALGWRFIRERPGLLGLLGFS HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHH SAVNLITVLVTVLITPLVLSFTDPTTLGLVVSCSGVGMVAGGITMGVWGGPKRRILGVLG HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEECCCEEEECCCCCHHHHHHHHH AELVAGVALLAAALPASVFVVACAAFVFMFTAPVAMGCSQAIWQSKVPPAIQGRVFATRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHH MLALVAPPVAALLAGPLTDKVFDPWMAPDGALANTFGQVLGTGPGRGIALLYVVLGLLLA HHHHHCCHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH GCVMLTASSPRVRGVEDELPDALLPQGLPAAQQQA HHHHHCCCCCCCCCCHHHCCHHHCCCCCCCCCCCC >Mature Secondary Structure AFSSRNVVTNPARVFSLIWLGQLISSLGTGLTQFSVGVYVYQNSDSVTEYSLASFFGFL CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHEEEEEEEEEECCCCCHHHHHHHHHHHH PMVLLAPVAGSMVDRSNRQRVMLLADLGAMTAIGLMWCFVAADRAGLWPLQNWHFYPPLA HHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH MSAAFSTFRVLAFSTATPLLVSKQNLGRANGMVELAMSAGQLLGPAMAGVLVVRMGLQGV HHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LLIDLATFLFAVATLLSVRIPQPEPDAARTEPRKSLWTDIALGWRFIRERPGLLGLLGFS HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHH SAVNLITVLVTVLITPLVLSFTDPTTLGLVVSCSGVGMVAGGITMGVWGGPKRRILGVLG HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEECCCEEEECCCCCHHHHHHHHH AELVAGVALLAAALPASVFVVACAAFVFMFTAPVAMGCSQAIWQSKVPPAIQGRVFATRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHH MLALVAPPVAALLAGPLTDKVFDPWMAPDGALANTFGQVLGTGPGRGIALLYVVLGLLLA HHHHHCCHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH GCVMLTASSPRVRGVEDELPDALLPQGLPAAQQQA HHHHHCCCCCCCCCCHHHCCHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8946165; 9384377 [H]