| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108761252
Identifier: 108761252
GI number: 108761252
Start: 5471341
End: 5472165
Strand: Direct
Name: 108761252
Synonym: MXAN_4419
Alternate gene names: NA
Gene position: 5471341-5472165 (Clockwise)
Preceding gene: 108760394
Following gene: 108759083
Centisome position: 59.86
GC content: 65.58
Gene sequence:
>825_bases ATGTCCAATCCCATCATCGAAGCGCTCGACGCGGCCATGATTCCCTTCCGTCGAACCCATGCGGGTGAGGCGCTCGCGCG TGTGGAAGAAACCCTGCTCATCAACACGGGGCGACAGCCCCTCCCACCGCTGCCGGCGCTGCAACGCCCGTCATTGTTCT ACTTCCCGGGTCTGGGCACGCGCGGCTGGTACTCGGCCTCCGAGTACCCCTCGCTCGACTCCCTGGCCCGCCTCCTGAAA GAAGCCACGCCGATGCTGCGCGAGGAATTCCTGACGCGCGCGCACCAGGGCGAACTGCTGGCCTACGAAGAGCAGATGCC GGGCCGCTTCCCCACCCTCGACCGGCAGGACTGGGGGTCGCTCTATCTGCTCAAGGAGGGCATGCGGAACGAGACGAATT GCGAGGCCTGCCCCCGCAGCGCGGCCTTGATGGAGACGCTCTACCCTCAGTTCAGCCCGAGCGGCGCCTTCTTCTTCTCC GTGATCGGCCCGGGAACGAAGATTCCGCCGCACCACGACACGATGAACCTGAAGCTCACGTGCCACCTGCCGCTCATCGT TCCGCCCGACTGCCGGATCCGGGTAGACGGTGAGACGCGCGAATGGGTGGAGGGCGAGTCCCTGTTCTTCGACGACACCT TCCTGCACGAGGTGTGGAACAACAGCGACCGGCCTCGGGTCTGCCTGCTGCTCGACATCTGGCACCCCGGCCTCACCGCC ATCGAGCGAGAGGCCATCACCGCGCTCGGCCGGGTGATGGGGCAGTTCATCAACCAGGGATACACCCCTCCCTGGTCGAC GAATGGCCGAATCTTCGAGCACTGA
Upstream 100 bases:
>100_bases GACAATAGAAGCCACCCTGACCTGAATCGCAAGACACCCCAGACCGCCCAGGAATTTCCTCTCAAGAATTCAACCCACAC AGAATTCTCCACGGCACCCC
Downstream 100 bases:
>100_bases GGCCTGGCCGGAAGCCCCGCCCTCAGCCCGCCACGTCCAGCATCCACACGTGGCCGTCCGGGTCCTTGAACGTCCCCGAG TACCCCCAGGGCTGCTTCCC
Product: beta-hydroxylase
Products: NA
Alternate protein names: Beta-Hydroxylase; Asparaginyl Beta-Hydroxylase; Peptide-Aspartate Beta-Dioxygenase; Beta-Hydroxylase Aspartyl/Asparaginyl Family; Aspartyl-Asparaginyl Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Family Protein; Membrane-Bound Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Family; Lipopolysaccharide Biosynthetic; Lipid A-Myristate Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Transmembrane Protein; Aspartyl/Asparaginyl-Beta-Hydroxylase; Hydroxylase; Peptide-Aspartate B-Dioxygenase; Aspartate Beta-Hydroxylase; Lipopolysaccharide Biosynthetic Protein; Fe(2+)/Alpha-Ketoglutarate-Dependent Dioxygenase LpxO; Dioxygenase; Aspartyl/Asparaginyl Beta-Hydroxylase Protein; Beta-Hydroxylase Aspartyl/Asparaginyl Family Protein
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSNPIIEALDAAMIPFRRTHAGEALARVEETLLINTGRQPLPPLPALQRPSLFYFPGLGTRGWYSASEYPSLDSLARLLK EATPMLREEFLTRAHQGELLAYEEQMPGRFPTLDRQDWGSLYLLKEGMRNETNCEACPRSAALMETLYPQFSPSGAFFFS VIGPGTKIPPHHDTMNLKLTCHLPLIVPPDCRIRVDGETREWVEGESLFFDDTFLHEVWNNSDRPRVCLLLDIWHPGLTA IEREAITALGRVMGQFINQGYTPPWSTNGRIFEH
Sequences:
>Translated_274_residues MSNPIIEALDAAMIPFRRTHAGEALARVEETLLINTGRQPLPPLPALQRPSLFYFPGLGTRGWYSASEYPSLDSLARLLK EATPMLREEFLTRAHQGELLAYEEQMPGRFPTLDRQDWGSLYLLKEGMRNETNCEACPRSAALMETLYPQFSPSGAFFFS VIGPGTKIPPHHDTMNLKLTCHLPLIVPPDCRIRVDGETREWVEGESLFFDDTFLHEVWNNSDRPRVCLLLDIWHPGLTA IEREAITALGRVMGQFINQGYTPPWSTNGRIFEH >Mature_273_residues SNPIIEALDAAMIPFRRTHAGEALARVEETLLINTGRQPLPPLPALQRPSLFYFPGLGTRGWYSASEYPSLDSLARLLKE ATPMLREEFLTRAHQGELLAYEEQMPGRFPTLDRQDWGSLYLLKEGMRNETNCEACPRSAALMETLYPQFSPSGAFFFSV IGPGTKIPPHHDTMNLKLTCHLPLIVPPDCRIRVDGETREWVEGESLFFDDTFLHEVWNNSDRPRVCLLLDIWHPGLTAI EREAITALGRVMGQFINQGYTPPWSTNGRIFEH
Specific function: Unknown
COG id: COG3555
COG function: function code O; Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI14589866, Length=236, Percent_Identity=30.9322033898305, Blast_Score=118, Evalue=7e-27, Organism=Homo sapiens, GI258613943, Length=236, Percent_Identity=30.9322033898305, Blast_Score=117, Evalue=9e-27, Organism=Homo sapiens, GI194328779, Length=208, Percent_Identity=32.2115384615385, Blast_Score=112, Evalue=5e-25, Organism=Homo sapiens, GI38708313, Length=131, Percent_Identity=36.6412213740458, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI193210573, Length=201, Percent_Identity=25.8706467661692, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI193210571, Length=201, Percent_Identity=25.8706467661692, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17568771, Length=201, Percent_Identity=25.8706467661692, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24654024, Length=138, Percent_Identity=36.231884057971, Blast_Score=96, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31094; Mature: 30963
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPIIEALDAAMIPFRRTHAGEALARVEETLLINTGRQPLPPLPALQRPSLFYFPGLGT CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEECCCCC RGWYSASEYPSLDSLARLLKEATPMLREEFLTRAHQGELLAYEEQMPGRFPTLDRQDWGS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCCCCCCCCCC LYLLKEGMRNETNCEACPRSAALMETLYPQFSPSGAFFFSVIGPGTKIPPHHDTMNLKLT EEEEHHCCCCCCCHHHCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEE CHLPLIVPPDCRIRVDGETREWVEGESLFFDDTFLHEVWNNSDRPRVCLLLDIWHPGLTA EEECEEECCCCEEEECCCCHHHHCCCEEEECHHHHHHHHCCCCCCEEEEEEEECCCCHHH IEREAITALGRVMGQFINQGYTPPWSTNGRIFEH HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECC >Mature Secondary Structure SNPIIEALDAAMIPFRRTHAGEALARVEETLLINTGRQPLPPLPALQRPSLFYFPGLGT CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEECCCCC RGWYSASEYPSLDSLARLLKEATPMLREEFLTRAHQGELLAYEEQMPGRFPTLDRQDWGS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCCCCCCCCCC LYLLKEGMRNETNCEACPRSAALMETLYPQFSPSGAFFFSVIGPGTKIPPHHDTMNLKLT EEEEHHCCCCCCCHHHCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEE CHLPLIVPPDCRIRVDGETREWVEGESLFFDDTFLHEVWNNSDRPRVCLLLDIWHPGLTA EEECEEECCCCEEEECCCCHHHHCCCEEEECHHHHHHHHCCCCCCEEEEEEEECCCCHHH IEREAITALGRVMGQFINQGYTPPWSTNGRIFEH HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA