| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is pkn6 [H]
Identifier: 108761165
GI number: 108761165
Start: 5547428
End: 5548594
Strand: Direct
Name: pkn6 [H]
Synonym: MXAN_4479
Alternate gene names: 108761165
Gene position: 5547428-5548594 (Clockwise)
Preceding gene: 108759414
Following gene: 108763615
Centisome position: 60.7
GC content: 69.07
Gene sequence:
>1167_bases ATGACCGATGACAGCACGCCGACCCACGAAACGAAGTTCGAGGACCCGACGCCGGAGAACAGCTCCGACCTGGAGCGCGC CCGACCCGGGCTCCGGTTCACCATCGACACCACCACCTACGCGGCACTCCGCACGCTGGAGCGGCGGGGCAATGGCGAGG TGGTGCTCCTGGCCGAGCGTCACCTCCCCCATGGCCTCGCCGGGCATGTCACCATCAAACGCCTGCGCAACCCCGCATCC TTCGAGCGCTGCCAGCGGCTCATCGAGGAGGTCCAGCTCGCCTTCCGGCTCCACCACCCGGCCATCGCCCAGGTCCATCA CCTGAAAATCCACGCCGACAGGCCGCACATCATCGCGGAGTACGTGGACGGCCCCACGCTGGACACCGTCATCAGCCTCG CCACCATGCGTGAGCGGCCGCTCTGCGCGCCCTTCGCCCTCTACATCGCCGCCGAGATTGCCGACGCCCTCCACCACTCG CACACGCTGAGGGATTCGGAGAACCGGCCGCTGGGCATCATCCACCGCGACGTCGCTCCTCGGAACATCCGCGTGGCCCG GAGTGGCGAGGTGAAGGTGACGGACTTCGGCGCCGCCTACTCGCTCATGGTGGGCCGGGAGGAGACCCCGGGCCTCCTGC TCAAGGGCGACGTGGCGTACGCCTCGCCCGAGTACCTGCTCCGCAAGCCCATGGATGGCCGGTCCGATATCTTCTCCCTG GGCCTCGTCCTCATGGAGATGCTGACGTGCAAGCACCTCTTCGACCTGGAGGACGCGCAGGCCCCCATCGCCGCCCTGGA CGTGAAGACGGAGGAGGTGCCCTCCGTGCCCCTCACGCAGATGATCGCGCTCGTCAGCCGCTACCGCTCCGAGGACGTGG AGCACGCGATGGCGGGCCTGCCGGACGCGCTCAAGGCCATCATCCACAAGGCCCTCCAGCGCAAGCCCTCCGAGCGCTAC ACCTCGGCCGCCGAGCTGCGCGATGCCCTGCGGGCGGCGCTCGCGGCACAGGCCCAGCCCTTCGGACGGAAGGAGGCGGC TGAGGAGCTGGCACGGATGCTGTCGGACGCCTCCGTCCTGCGCGACCGGGTGGAGCTGGACGAAGCGGGAATCTTCCCCG AGGGACTGGACGCAGACGAAGCGACGCTCGCGCCGAACTCGAAGTGA
Upstream 100 bases:
>100_bases ACAGCCACCGAGCCCGACTGCCGCAGCCATGGCCAATCAGAGCGCCGGGATGCCCGTGCCAGCGCCCGCCGCGCGTCTCA ACCCCACCAGGAGGCCGCCC
Downstream 100 bases:
>100_bases GCACGGGCGGCCGGGCGACGCTTCAACGCAGCAGCACCTGGGCCACCTTCACGAGGGCGTCGAGTTGCTCCTCGTCCATC TTTCGCGCGAGGCCGGTGAG
Product: putative serine/threonine protein kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MTDDSTPTHETKFEDPTPENSSDLERARPGLRFTIDTTTYAALRTLERRGNGEVVLLAERHLPHGLAGHVTIKRLRNPAS FERCQRLIEEVQLAFRLHHPAIAQVHHLKIHADRPHIIAEYVDGPTLDTVISLATMRERPLCAPFALYIAAEIADALHHS HTLRDSENRPLGIIHRDVAPRNIRVARSGEVKVTDFGAAYSLMVGREETPGLLLKGDVAYASPEYLLRKPMDGRSDIFSL GLVLMEMLTCKHLFDLEDAQAPIAALDVKTEEVPSVPLTQMIALVSRYRSEDVEHAMAGLPDALKAIIHKALQRKPSERY TSAAELRDALRAALAAQAQPFGRKEAAEELARMLSDASVLRDRVELDEAGIFPEGLDADEATLAPNSK
Sequences:
>Translated_388_residues MTDDSTPTHETKFEDPTPENSSDLERARPGLRFTIDTTTYAALRTLERRGNGEVVLLAERHLPHGLAGHVTIKRLRNPAS FERCQRLIEEVQLAFRLHHPAIAQVHHLKIHADRPHIIAEYVDGPTLDTVISLATMRERPLCAPFALYIAAEIADALHHS HTLRDSENRPLGIIHRDVAPRNIRVARSGEVKVTDFGAAYSLMVGREETPGLLLKGDVAYASPEYLLRKPMDGRSDIFSL GLVLMEMLTCKHLFDLEDAQAPIAALDVKTEEVPSVPLTQMIALVSRYRSEDVEHAMAGLPDALKAIIHKALQRKPSERY TSAAELRDALRAALAAQAQPFGRKEAAEELARMLSDASVLRDRVELDEAGIFPEGLDADEATLAPNSK >Mature_387_residues TDDSTPTHETKFEDPTPENSSDLERARPGLRFTIDTTTYAALRTLERRGNGEVVLLAERHLPHGLAGHVTIKRLRNPASF ERCQRLIEEVQLAFRLHHPAIAQVHHLKIHADRPHIIAEYVDGPTLDTVISLATMRERPLCAPFALYIAAEIADALHHSH TLRDSENRPLGIIHRDVAPRNIRVARSGEVKVTDFGAAYSLMVGREETPGLLLKGDVAYASPEYLLRKPMDGRSDIFSLG LVLMEMLTCKHLFDLEDAQAPIAALDVKTEEVPSVPLTQMIALVSRYRSEDVEHAMAGLPDALKAIIHKALQRKPSERYT SAAELRDALRAALAAQAQPFGRKEAAEELARMLSDASVLRDRVELDEAGIFPEGLDADEATLAPNSK
Specific function: Pkn5 and pkn6 may have reciprocal roles in growth and development. Pkn6 may be a transmembrane sensor of external signals for development [H]
COG id: COG0515
COG function: function code RTKL; Serine/threonine protein kinase
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
Organism=Homo sapiens, GI4505373, Length=219, Percent_Identity=27.8538812785388, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI225735561, Length=301, Percent_Identity=23.9202657807309, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI66932999, Length=166, Percent_Identity=31.9277108433735, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI219521880, Length=150, Percent_Identity=32.6666666666667, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI219521876, Length=153, Percent_Identity=32.0261437908497, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI219521878, Length=153, Percent_Identity=32.0261437908497, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI25168263, Length=153, Percent_Identity=32.0261437908497, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI33636756, Length=221, Percent_Identity=28.9592760180996, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI38327572, Length=218, Percent_Identity=29.8165137614679, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI38327570, Length=218, Percent_Identity=29.8165137614679, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI38327568, Length=218, Percent_Identity=29.8165137614679, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI38327566, Length=218, Percent_Identity=29.8165137614679, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI38327564, Length=218, Percent_Identity=29.8165137614679, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI38327562, Length=218, Percent_Identity=29.8165137614679, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI55743136, Length=234, Percent_Identity=26.0683760683761, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI19923570, Length=234, Percent_Identity=26.0683760683761, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI148839316, Length=223, Percent_Identity=28.6995515695067, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI55956904, Length=190, Percent_Identity=28.9473684210526, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI55956902, Length=190, Percent_Identity=28.9473684210526, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI7657526, Length=216, Percent_Identity=25.9259259259259, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI75813626, Length=214, Percent_Identity=27.5700934579439, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI31563382, Length=214, Percent_Identity=27.5700934579439, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI20149547, Length=226, Percent_Identity=26.5486725663717, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI25168261, Length=200, Percent_Identity=28.5, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI55743134, Length=226, Percent_Identity=26.5486725663717, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI20127541, Length=200, Percent_Identity=28.5, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI4759050, Length=162, Percent_Identity=29.6296296296296, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI217330634, Length=177, Percent_Identity=29.3785310734463, Blast_Score=66, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17542550, Length=307, Percent_Identity=27.0358306188925, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71989900, Length=216, Percent_Identity=27.7777777777778, Blast_Score=76, Evalue=4e-14, Organism=Caenorhabditis elegans, GI193203107, Length=216, Percent_Identity=27.7777777777778, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI71989905, Length=216, Percent_Identity=27.7777777777778, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI71989893, Length=216, Percent_Identity=27.7777777777778, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI71989911, Length=216, Percent_Identity=27.7777777777778, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI115533246, Length=226, Percent_Identity=28.3185840707965, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI193208263, Length=226, Percent_Identity=28.3185840707965, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17544060, Length=307, Percent_Identity=26.7100977198697, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71997537, Length=226, Percent_Identity=28.3185840707965, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI133951912, Length=232, Percent_Identity=28.448275862069, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI133951926, Length=232, Percent_Identity=28.448275862069, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17505246, Length=181, Percent_Identity=25.414364640884, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71990759, Length=187, Percent_Identity=26.2032085561497, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25151367, Length=182, Percent_Identity=25.8241758241758, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17511015, Length=205, Percent_Identity=29.7560975609756, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17567859, Length=169, Percent_Identity=27.2189349112426, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI115533550, Length=284, Percent_Identity=25.3521126760563, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115533552, Length=284, Percent_Identity=25.3521126760563, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI193205134, Length=169, Percent_Identity=26.0355029585799, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI133901724, Length=167, Percent_Identity=26.9461077844311, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI133901722, Length=169, Percent_Identity=26.0355029585799, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71997531, Length=218, Percent_Identity=26.605504587156, Blast_Score=65, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6323394, Length=228, Percent_Identity=28.0701754385965, Blast_Score=80, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6323125, Length=207, Percent_Identity=28.5024154589372, Blast_Score=76, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6320327, Length=207, Percent_Identity=28.5024154589372, Blast_Score=72, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6325053, Length=209, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6322297, Length=222, Percent_Identity=28.8288288288288, Blast_Score=69, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6319917, Length=206, Percent_Identity=25.2427184466019, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6325047, Length=210, Percent_Identity=26.1904761904762, Blast_Score=64, Evalue=4e-11, Organism=Drosophila melanogaster, GI17136402, Length=237, Percent_Identity=30.8016877637131, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI161077180, Length=237, Percent_Identity=30.8016877637131, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI24654282, Length=237, Percent_Identity=30.8016877637131, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI18858209, Length=175, Percent_Identity=27.4285714285714, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI45552739, Length=223, Percent_Identity=29.5964125560538, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI45552749, Length=223, Percent_Identity=29.5964125560538, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI281363794, Length=223, Percent_Identity=29.5964125560538, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI45552751, Length=223, Percent_Identity=29.5964125560538, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24649791, Length=169, Percent_Identity=33.1360946745562, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI45552743, Length=223, Percent_Identity=29.5964125560538, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI62471747, Length=223, Percent_Identity=29.5964125560538, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI45552741, Length=223, Percent_Identity=29.5964125560538, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI45552747, Length=223, Percent_Identity=29.5964125560538, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI281363800, Length=223, Percent_Identity=29.5964125560538, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI281363796, Length=223, Percent_Identity=29.5964125560538, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI45552731, Length=223, Percent_Identity=29.5964125560538, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI45552735, Length=223, Percent_Identity=29.5964125560538, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI45552737, Length=223, Percent_Identity=29.5964125560538, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI45552733, Length=223, Percent_Identity=29.5964125560538, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI281363798, Length=223, Percent_Identity=29.5964125560538, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI62471745, Length=223, Percent_Identity=29.5964125560538, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI62471749, Length=223, Percent_Identity=29.5964125560538, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI45552745, Length=223, Percent_Identity=29.5964125560538, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24643817, Length=249, Percent_Identity=26.5060240963855, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24642565, Length=173, Percent_Identity=27.7456647398844, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI17737298, Length=315, Percent_Identity=25.0793650793651, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24664872, Length=213, Percent_Identity=25.3521126760563, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI28574900, Length=213, Percent_Identity=25.3521126760563, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI17136516, Length=257, Percent_Identity=28.4046692607004, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR013229 - InterPro: IPR000719 - InterPro: IPR017442 - InterPro: IPR008266 [H]
Pfam domain/function: PF08308 PEGA; PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 42985; Mature: 42853
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS50011 PROTEIN_KINASE_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDDSTPTHETKFEDPTPENSSDLERARPGLRFTIDTTTYAALRTLERRGNGEVVLLAER CCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEECHHHHHHHHHHHHCCCCCEEEEECC HLPHGLAGHVTIKRLRNPASFERCQRLIEEVQLAFRLHHPAIAQVHHLKIHADRPHIIAE CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHEEEEEEECCCCCEEHH YVDGPTLDTVISLATMRERPLCAPFALYIAAEIADALHHSHTLRDSENRPLGIIHRDVAP HCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC RNIRVARSGEVKVTDFGAAYSLMVGREETPGLLLKGDVAYASPEYLLRKPMDGRSDIFSL CCEEEEECCCEEEEECCCEEEEEECCCCCCCEEEECCCCCCCCHHHHHCCCCCHHHHHHH GLVLMEMLTCKHLFDLEDAQAPIAALDVKTEEVPSVPLTQMIALVSRYRSEDVEHAMAGL HHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC PDALKAIIHKALQRKPSERYTSAAELRDALRAALAAQAQPFGRKEAAEELARMLSDASVL CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH RDRVELDEAGIFPEGLDADEATLAPNSK HHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TDDSTPTHETKFEDPTPENSSDLERARPGLRFTIDTTTYAALRTLERRGNGEVVLLAER CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEECHHHHHHHHHHHHCCCCCEEEEECC HLPHGLAGHVTIKRLRNPASFERCQRLIEEVQLAFRLHHPAIAQVHHLKIHADRPHIIAE CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHEEEEEEECCCCCEEHH YVDGPTLDTVISLATMRERPLCAPFALYIAAEIADALHHSHTLRDSENRPLGIIHRDVAP HCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC RNIRVARSGEVKVTDFGAAYSLMVGREETPGLLLKGDVAYASPEYLLRKPMDGRSDIFSL CCEEEEECCCEEEEECCCEEEEEECCCCCCCEEEECCCCCCCCHHHHHCCCCCHHHHHHH GLVLMEMLTCKHLFDLEDAQAPIAALDVKTEEVPSVPLTQMIALVSRYRSEDVEHAMAGL HHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC PDALKAIIHKALQRKPSERYTSAAELRDALRAALAAQAQPFGRKEAAEELARMLSDASVL CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH RDRVELDEAGIFPEGLDADEATLAPNSK HHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8733241 [H]