| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is mviN [H]
Identifier: 108761161
GI number: 108761161
Start: 4141864
End: 4143561
Strand: Direct
Name: mviN [H]
Synonym: MXAN_3558
Alternate gene names: 108761161
Gene position: 4141864-4143561 (Clockwise)
Preceding gene: 108760516
Following gene: 108762762
Centisome position: 45.32
GC content: 69.91
Gene sequence:
>1698_bases GTGACCACGTCTTCGCCCGAGTCTCCGCCCCCGCCGATTGCGCCGGTTGCGCCTCCTCGTCCCGAGCGCTCTGGAGGTGG CGCCGCGCTGGTCGCGGCCGGCATCCTTGCTTCCCGGCTGATGGGCCTGGTGCGCGAGCGCGTCTTCGCCCACTACCTGG GTAATACGGAGGTCGCGGCCGTCTTCAAGGCGGCGCTGCGCATTCCCAACTTCCTGCAGAACCTGTTCGGCGAGGGCGTC CTCTCCGGCTCGTTCATTCCCGTCTACGCGCAGCTCTTGGGCCGCAAGGACACGGAGACGGCGGACCGGGTCGCGGGCGC CGTCTTCGGCATCCTGTCCCTGGTCACGGCGGTGGTGGTGGCGCTGGGCATGGTGTTCACCCCGCTGCTGGTGGATGCCA TCGCGCCCGGTTTCCAGGGACAGGAGCGGGAGCTGGCCGTCCACCTGGTGCGCATCCTCTTCCCCGGCACAGGCATGCTG GTGCTGAGCGCCTGGTGCCTGGGCATCCTCAACAGCCACCGGCGCTTCCTCCTTTCGTACCTGGCGCCCGTCGTCTGGAA CCTGGTCATCATCGCCGCGTTGGTGGCCGCGGGAGGCCGCTACGAGGAAGAGGCGTTGGTTTCGGTGCTGGCCTACGCCG TGGTGCTGGGCAGCTTCCTCCAGTTCGCGGTGCAGGTGCCCTCCGTCCTCAAGTTGATGGGCCGCTTCCGCCCGACGCTG TCGCTGGCGGCGGAGCCGGTGCGGCAGGTGTTGAAGAACTTCGGGCCGGTCGTGCTGGGGCGCGGCGTGGTCCAGTTCAG CGCGTGGGTGGACACGGCCTTCGCGTCACTCATCTCCAATCGCGCGCTGTCCTCGCTGCTCTACGCGCAGACCATCTACC TCATCCCGGTGAGCCTCTTTGGGATGGCGGTGTCCGCGGCGGAGTTGCCGGAGATGTCGCGCGCCACGGGGGAGGGCGCG GACGTGGCCGCCAGGTTGCGCCAACGCATCGACGGAGGCGCACGCCGCATCTGCTTCTGGGTCGTCCCGTCGGCGGCGGC CTTCCTCTTCCTGGGGGACATGGTGGCGGCGGCGTTGCTGCAGACAGGGCGCTTCGATGCGGCGGACTCGCGCTACCTCT GGTACCTGCTGATGGGGGCGGCGCTGGGATTGGTGGCCTCCACGGTGGGGCGTCTCTATGCCTCCGCCTTCTATGCGCTG AAGGATCCGAAGACGCCGCTGCGCTTCGCGGTGGTGCGCGTGCTGGTGGGTACCCTGGGCGCATGGGTGCTGGGCCTGTG GCTGCCGGGATGGCTGGGGGTGCCGCAGCACCTGGGCGCGTTGGGCCTCACCCTGGCCAGCGGCCTGGTGGCCTGGCTGG AGGCGGGACTGCTGCGCCGCAAGCTGGTGAAGCAGCTCGGGCCGGTCGGCGTCCCGTCTGGACTGCTGCCTCGCTTGTGG GGCGCCGCGGTGGTGGCTGGATTGGTGGCGGTGGGCATCAAGGTGGGCCTCACCTCGCTGCTCGGGCCGATGCCCGGTGT GTCGGCGGAGTGGGGGGGGGGCTTCCTGATGCCGCCGCGCCTGCACCCCGTTCTGGGCTTCGCGGCGGTGGCGCTCCCGT TCGGTGCTGTTTATTTCGGGATGTCAGCGGCCTTGGGCATCCCAGAGGCGGGAACGGTGTTGCGCAAGGTGGGGCGGAAG CTGCGTCTGGTGCGCTAA
Upstream 100 bases:
>100_bases TGGACCCTTGCAATCCAGGGGGTTCGGCGTCAAGCGAAACAGGGGGACGGGGTTTCGAGCTTCATGACACCGAACGGCCC GCGTAGAGTCCGCCGCTCTC
Downstream 100 bases:
>100_bases CCACCTGGGATTGCTTGGCTCCCTGCCTGGTAAACGGCCGCTATTTGGTGTTGCAAGCATCGGGTCCGGGATGCTCTGAC GGGGTGCCTCCGTTATGGTC
Product: integral membrane protein MviN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 565; Mature: 564
Protein sequence:
>565_residues MTTSSPESPPPPIAPVAPPRPERSGGGAALVAAGILASRLMGLVRERVFAHYLGNTEVAAVFKAALRIPNFLQNLFGEGV LSGSFIPVYAQLLGRKDTETADRVAGAVFGILSLVTAVVVALGMVFTPLLVDAIAPGFQGQERELAVHLVRILFPGTGML VLSAWCLGILNSHRRFLLSYLAPVVWNLVIIAALVAAGGRYEEEALVSVLAYAVVLGSFLQFAVQVPSVLKLMGRFRPTL SLAAEPVRQVLKNFGPVVLGRGVVQFSAWVDTAFASLISNRALSSLLYAQTIYLIPVSLFGMAVSAAELPEMSRATGEGA DVAARLRQRIDGGARRICFWVVPSAAAFLFLGDMVAAALLQTGRFDAADSRYLWYLLMGAALGLVASTVGRLYASAFYAL KDPKTPLRFAVVRVLVGTLGAWVLGLWLPGWLGVPQHLGALGLTLASGLVAWLEAGLLRRKLVKQLGPVGVPSGLLPRLW GAAVVAGLVAVGIKVGLTSLLGPMPGVSAEWGGGFLMPPRLHPVLGFAAVALPFGAVYFGMSAALGIPEAGTVLRKVGRK LRLVR
Sequences:
>Translated_565_residues MTTSSPESPPPPIAPVAPPRPERSGGGAALVAAGILASRLMGLVRERVFAHYLGNTEVAAVFKAALRIPNFLQNLFGEGV LSGSFIPVYAQLLGRKDTETADRVAGAVFGILSLVTAVVVALGMVFTPLLVDAIAPGFQGQERELAVHLVRILFPGTGML VLSAWCLGILNSHRRFLLSYLAPVVWNLVIIAALVAAGGRYEEEALVSVLAYAVVLGSFLQFAVQVPSVLKLMGRFRPTL SLAAEPVRQVLKNFGPVVLGRGVVQFSAWVDTAFASLISNRALSSLLYAQTIYLIPVSLFGMAVSAAELPEMSRATGEGA DVAARLRQRIDGGARRICFWVVPSAAAFLFLGDMVAAALLQTGRFDAADSRYLWYLLMGAALGLVASTVGRLYASAFYAL KDPKTPLRFAVVRVLVGTLGAWVLGLWLPGWLGVPQHLGALGLTLASGLVAWLEAGLLRRKLVKQLGPVGVPSGLLPRLW GAAVVAGLVAVGIKVGLTSLLGPMPGVSAEWGGGFLMPPRLHPVLGFAAVALPFGAVYFGMSAALGIPEAGTVLRKVGRK LRLVR >Mature_564_residues TTSSPESPPPPIAPVAPPRPERSGGGAALVAAGILASRLMGLVRERVFAHYLGNTEVAAVFKAALRIPNFLQNLFGEGVL SGSFIPVYAQLLGRKDTETADRVAGAVFGILSLVTAVVVALGMVFTPLLVDAIAPGFQGQERELAVHLVRILFPGTGMLV LSAWCLGILNSHRRFLLSYLAPVVWNLVIIAALVAAGGRYEEEALVSVLAYAVVLGSFLQFAVQVPSVLKLMGRFRPTLS LAAEPVRQVLKNFGPVVLGRGVVQFSAWVDTAFASLISNRALSSLLYAQTIYLIPVSLFGMAVSAAELPEMSRATGEGAD VAARLRQRIDGGARRICFWVVPSAAAFLFLGDMVAAALLQTGRFDAADSRYLWYLLMGAALGLVASTVGRLYASAFYALK DPKTPLRFAVVRVLVGTLGAWVLGLWLPGWLGVPQHLGALGLTLASGLVAWLEAGLLRRKLVKQLGPVGVPSGLLPRLWG AAVVAGLVAVGIKVGLTSLLGPMPGVSAEWGGGFLMPPRLHPVLGFAAVALPFGAVYFGMSAALGIPEAGTVLRKVGRKL RLVR
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=441, Percent_Identity=30.3854875283447, Blast_Score=173, Evalue=2e-44,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 59515; Mature: 59384
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSSPESPPPPIAPVAPPRPERSGGGAALVAAGILASRLMGLVRERVFAHYLGNTEVAA CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH VFKAALRIPNFLQNLFGEGVLSGSFIPVYAQLLGRKDTETADRVAGAVFGILSLVTAVVV HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ALGMVFTPLLVDAIAPGFQGQERELAVHLVRILFPGTGMLVLSAWCLGILNSHRRFLLSY HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LAPVVWNLVIIAALVAAGGRYEEEALVSVLAYAVVLGSFLQFAVQVPSVLKLMGRFRPTL HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH SLAAEPVRQVLKNFGPVVLGRGVVQFSAWVDTAFASLISNRALSSLLYAQTIYLIPVSLF HHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GMAVSAAELPEMSRATGEGADVAARLRQRIDGGARRICFWVVPSAAAFLFLGDMVAAALL HHHHHHHHCCHHHHCCCCCHHHHHHHHHHHCCCHHEEEEEEHHHHHHHHHHHHHHHHHHH QTGRFDAADSRYLWYLLMGAALGLVASTVGRLYASAFYALKDPKTPLRFAVVRVLVGTLG HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AWVLGLWLPGWLGVPQHLGALGLTLASGLVAWLEAGLLRRKLVKQLGPVGVPSGLLPRLW HHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH GAAVVAGLVAVGIKVGLTSLLGPMPGVSAEWGGGFLMPPRLHPVLGFAAVALPFGAVYFG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH MSAALGIPEAGTVLRKVGRKLRLVR HHHHCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure TTSSPESPPPPIAPVAPPRPERSGGGAALVAAGILASRLMGLVRERVFAHYLGNTEVAA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH VFKAALRIPNFLQNLFGEGVLSGSFIPVYAQLLGRKDTETADRVAGAVFGILSLVTAVVV HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ALGMVFTPLLVDAIAPGFQGQERELAVHLVRILFPGTGMLVLSAWCLGILNSHRRFLLSY HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LAPVVWNLVIIAALVAAGGRYEEEALVSVLAYAVVLGSFLQFAVQVPSVLKLMGRFRPTL HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH SLAAEPVRQVLKNFGPVVLGRGVVQFSAWVDTAFASLISNRALSSLLYAQTIYLIPVSLF HHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GMAVSAAELPEMSRATGEGADVAARLRQRIDGGARRICFWVVPSAAAFLFLGDMVAAALL HHHHHHHHCCHHHHCCCCCHHHHHHHHHHHCCCHHEEEEEEHHHHHHHHHHHHHHHHHHH QTGRFDAADSRYLWYLLMGAALGLVASTVGRLYASAFYALKDPKTPLRFAVVRVLVGTLG HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AWVLGLWLPGWLGVPQHLGALGLTLASGLVAWLEAGLLRRKLVKQLGPVGVPSGLLPRLW HHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH GAAVVAGLVAVGIKVGLTSLLGPMPGVSAEWGGGFLMPPRLHPVLGFAAVALPFGAVYFG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH MSAALGIPEAGTVLRKVGRKLRLVR HHHHCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]