| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108761090
Identifier: 108761090
GI number: 108761090
Start: 1622909
End: 1623691
Strand: Reverse
Name: 108761090
Synonym: MXAN_1382
Alternate gene names: NA
Gene position: 1623691-1622909 (Counterclockwise)
Preceding gene: 108759847
Following gene: 108763137
Centisome position: 17.77
GC content: 72.41
Gene sequence:
>783_bases GTGCCCACCCCACCGCCCATCTTCGACGCCCACCTCCACCCGGAGAGCCTGAGCGACCAGGATTTGGAGTCCATGCGCTT CTTCGGCGTGGAGCGGGCGCTGGTGGTGGCGCACCACTTCCCGGAGCCCACGTCCAAGGCGCTGCTGCGGCACTTCGACG ACCTGGTGGAACGCCAGCTCCCCCGGCTGGAGCGCCTGGGCATCCGCGCCTACGCGGCCCTGGGCGTCCACCCACGCTGC ATCCCCCGGCGCGGCTTGAGCGAGGTGCTGTCCGCGCTGCCTGACTACTTCCAGGGCGGGCGCGTGGTGGCCCTGGGCGA GACGGGCCTGCACACGGGCGGCGAGGAGGAAGAAGAAGCCTTCCTGGAGCAGCTCGCGCTGGCCCGCAGCCTCAAGCTGC GCGTGGTGGTGCACACCCCCACCACGGACAAGGAGCGCCACACGCGGCGCATCCTCACGCTCCTGCGGCAGTCGGGACTG CTGCCCTCGCGCGCGCTGGTGGACCACGCCAACGCCCGGACGGTGCGCACCATCCTGGAGGTGGGCCACTGGGCCGGGCT GACGCTGCACCCCGAGGCGCTCAAGGCCGAGCGCGCGGTGGTGCTGGTGCGGCGGTTGGGCAGTGAGCGGCTGATGCTCA ACTCCGACGCGGGCGACGGCGCCGGGGACATCCTCGGCCTGGCGCGCGCCGCCAACCTGCTGACCAAGGCCAACCTGTCC GCGCGCATCGTCCGCCGCGTCACCCACGAGAACGCCGCTCGCTTCTTCCAGGTGGGCGACTGA
Upstream 100 bases:
>100_bases GGGCGACGCGGAGGCCGTCTACAGCGACCCGAAGACGGGGCTGCGCTTCTCCGCGAGTGACCCGCGCAACGAGGGCGCCG CCCTGGGACAGGATTGAGCA
Downstream 100 bases:
>100_bases CACTCGCGCGGCGCCGTACCGCCACCGTGGCCGGCGCCCGTTGACCCGGGTCCGCCATCCTCCGTGGCGGAATCTTGCGA TGAAACGGCGCGCTCTTCGT
Product: TatD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MPTPPPIFDAHLHPESLSDQDLESMRFFGVERALVVAHHFPEPTSKALLRHFDDLVERQLPRLERLGIRAYAALGVHPRC IPRRGLSEVLSALPDYFQGGRVVALGETGLHTGGEEEEEAFLEQLALARSLKLRVVVHTPTTDKERHTRRILTLLRQSGL LPSRALVDHANARTVRTILEVGHWAGLTLHPEALKAERAVVLVRRLGSERLMLNSDAGDGAGDILGLARAANLLTKANLS ARIVRRVTHENAARFFQVGD
Sequences:
>Translated_260_residues MPTPPPIFDAHLHPESLSDQDLESMRFFGVERALVVAHHFPEPTSKALLRHFDDLVERQLPRLERLGIRAYAALGVHPRC IPRRGLSEVLSALPDYFQGGRVVALGETGLHTGGEEEEEAFLEQLALARSLKLRVVVHTPTTDKERHTRRILTLLRQSGL LPSRALVDHANARTVRTILEVGHWAGLTLHPEALKAERAVVLVRRLGSERLMLNSDAGDGAGDILGLARAANLLTKANLS ARIVRRVTHENAARFFQVGD >Mature_259_residues PTPPPIFDAHLHPESLSDQDLESMRFFGVERALVVAHHFPEPTSKALLRHFDDLVERQLPRLERLGIRAYAALGVHPRCI PRRGLSEVLSALPDYFQGGRVVALGETGLHTGGEEEEEAFLEQLALARSLKLRVVVHTPTTDKERHTRRILTLLRQSGLL PSRALVDHANARTVRTILEVGHWAGLTLHPEALKAERAVVLVRRLGSERLMLNSDAGDGAGDILGLARAANLLTKANLSA RIVRRVTHENAARFFQVGD
Specific function: Unknown
COG id: COG1099
COG function: function code R; Predicted metal-dependent hydrolases with the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0761 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015992 - InterPro: IPR001130 - InterPro: IPR012022 [H]
Pfam domain/function: PF01026 TatD_DNase [H]
EC number: NA
Molecular weight: Translated: 28804; Mature: 28672
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPPPIFDAHLHPESLSDQDLESMRFFGVERALVVAHHFPEPTSKALLRHFDDLVERQL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH PRLERLGIRAYAALGVHPRCIPRRGLSEVLSALPDYFQGGRVVALGETGLHTGGEEEEEA HHHHHHCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHH FLEQLALARSLKLRVVVHTPTTDKERHTRRILTLLRQSGLLPSRALVDHANARTVRTILE HHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHH VGHWAGLTLHPEALKAERAVVLVRRLGSERLMLNSDAGDGAGDILGLARAANLLTKANLS HHHCCCCEECHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCHH ARIVRRVTHENAARFFQVGD HHHHHHHHHHHHHHHEECCC >Mature Secondary Structure PTPPPIFDAHLHPESLSDQDLESMRFFGVERALVVAHHFPEPTSKALLRHFDDLVERQL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH PRLERLGIRAYAALGVHPRCIPRRGLSEVLSALPDYFQGGRVVALGETGLHTGGEEEEEA HHHHHHCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHH FLEQLALARSLKLRVVVHTPTTDKERHTRRILTLLRQSGLLPSRALVDHANARTVRTILE HHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHH VGHWAGLTLHPEALKAERAVVLVRRLGSERLMLNSDAGDGAGDILGLARAANLLTKANLS HHHCCCCEECHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCHH ARIVRRVTHENAARFFQVGD HHHHHHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]