| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is capA [H]
Identifier: 108760803
GI number: 108760803
Start: 6138845
End: 6140062
Strand: Direct
Name: capA [H]
Synonym: MXAN_4905
Alternate gene names: 108760803
Gene position: 6138845-6140062 (Clockwise)
Preceding gene: 108760280
Following gene: 108759492
Centisome position: 67.17
GC content: 71.59
Gene sequence:
>1218_bases ATGCGCCACGTCGCCCTGCTGCTGCTCATGTTGTCCGCCTGTCACCCCCGCACCATCCCCCCGCCGGAGCCGCTGCCGCC GGAGGAGCCCGCCGGACAGTCCCCCGCCCCCGGGGATGCGGGCCAGGCGCCCGCCCCTCCCATCGGGGCGCCAGCGGCCG AGCCCCCCGCCCGTTCCGTGTCCATCATCGTGGGCGGCGACGTGACGCTGGGCCACAACTACCAGACACACTACGACGCG GAGACCGCCAAGGGCCGCCCCCAGGACGCCCTGCTGGCCTACGGGTTCCAGGAGGTGAAGCCCCTGACGGACGCCGCCGA CCTGTTCGTCGTCAACCTGGAGTGCCCCTTCACCGAGCGCGGTGAGAAGCTGCCCAAGAACTTCAACTTCCGCGCGAAGC CGGAGCTGGTGGGCATCCTCACCGCCGGCGGCGTGGACGTGGTGAGCCTGGCCAACAACCACCTGATGGACTACGGCGCC CAGGGCCTGCTCGACACGCTGGACACCCTGGACGCGGCGCACATCCCCTACTTCGGCGCGGGCCGGAACCTGGCGGAGGC CCGGCGCCCGGCCATCGTCACCGTGGGCGGCCAGCGGGTCGCGCTGCTGGGCTACTTCTTCCTGGGCACGCGCAACATCG AACCGCCCGGGGTCTACGCCACGGAGACGACCCCTGGGGTCGCTGGCCACTTCTCCGACGAGGCCGTCATGGAGCAGATG CTCCGGGAGGACATCGCCGCGGCCCGGGCCCAGGCGGACATCGTCCTGCCCTACTTCCACTGGGGACGCGAAGGCACCTA CACCCCGGAGCCCTACCAGGTCCGCCTGGCCCACGTCGCCATCGACGCGGGCGCCGCGGGTGTGCTGGGCGCCCACCCGC ACGTCCTCCAGGCCATGGAGCTGTACCAGGGCAGACCGGTCGTCTACTCGCTGGGGAACTTCGTCTTCGGGGGGAACTGG AACCCTCGCGACAAGCGCGGCGCCCTGTGGAAGGGCCACTTCGGGCCCGACGGCGGCTACCTGTCCAGCGAGATTCTGCC CTTGAGGACCGACCGCTTCCCGGAGCTGCCCTTCCAGCCGGTGCCCGTCACGGGCGAGGCGGCGGAGGCGGTGCTGCGGC TCCTGGCGGAGTCTTCAGAAGGCGTGGAGCGGATGCTGCCCGAATTGGAACCGTGGGCACGTCCGCCTCCCTCCCCCGAA GTCCGAGGGAGGGAGTAG
Upstream 100 bases:
>100_bases TCGTCGGAGAGAGCGATGTTGTCCTTTTCGCGGGCCATGAGCGCGCGGGCAATCTACGCGCCGCGCTCCAAGAGGTGCAA GGTAGAGTTTCCCCTCGCCC
Downstream 100 bases:
>100_bases CCAACGCACTAGACCTTGTTGTTGGACTGGCCCTTCTTGGCGCGGCTGCGGCGGCGCTTCAGCTGGGCCTTCCGGCCCTT GGCGCGGTTGGCGACCTTCT
Product: putative polyglutamate synthase CapA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MRHVALLLLMLSACHPRTIPPPEPLPPEEPAGQSPAPGDAGQAPAPPIGAPAAEPPARSVSIIVGGDVTLGHNYQTHYDA ETAKGRPQDALLAYGFQEVKPLTDAADLFVVNLECPFTERGEKLPKNFNFRAKPELVGILTAGGVDVVSLANNHLMDYGA QGLLDTLDTLDAAHIPYFGAGRNLAEARRPAIVTVGGQRVALLGYFFLGTRNIEPPGVYATETTPGVAGHFSDEAVMEQM LREDIAAARAQADIVLPYFHWGREGTYTPEPYQVRLAHVAIDAGAAGVLGAHPHVLQAMELYQGRPVVYSLGNFVFGGNW NPRDKRGALWKGHFGPDGGYLSSEILPLRTDRFPELPFQPVPVTGEAAEAVLRLLAESSEGVERMLPELEPWARPPPSPE VRGRE
Sequences:
>Translated_405_residues MRHVALLLLMLSACHPRTIPPPEPLPPEEPAGQSPAPGDAGQAPAPPIGAPAAEPPARSVSIIVGGDVTLGHNYQTHYDA ETAKGRPQDALLAYGFQEVKPLTDAADLFVVNLECPFTERGEKLPKNFNFRAKPELVGILTAGGVDVVSLANNHLMDYGA QGLLDTLDTLDAAHIPYFGAGRNLAEARRPAIVTVGGQRVALLGYFFLGTRNIEPPGVYATETTPGVAGHFSDEAVMEQM LREDIAAARAQADIVLPYFHWGREGTYTPEPYQVRLAHVAIDAGAAGVLGAHPHVLQAMELYQGRPVVYSLGNFVFGGNW NPRDKRGALWKGHFGPDGGYLSSEILPLRTDRFPELPFQPVPVTGEAAEAVLRLLAESSEGVERMLPELEPWARPPPSPE VRGRE >Mature_405_residues MRHVALLLLMLSACHPRTIPPPEPLPPEEPAGQSPAPGDAGQAPAPPIGAPAAEPPARSVSIIVGGDVTLGHNYQTHYDA ETAKGRPQDALLAYGFQEVKPLTDAADLFVVNLECPFTERGEKLPKNFNFRAKPELVGILTAGGVDVVSLANNHLMDYGA QGLLDTLDTLDAAHIPYFGAGRNLAEARRPAIVTVGGQRVALLGYFFLGTRNIEPPGVYATETTPGVAGHFSDEAVMEQM LREDIAAARAQADIVLPYFHWGREGTYTPEPYQVRLAHVAIDAGAAGVLGAHPHVLQAMELYQGRPVVYSLGNFVFGGNW NPRDKRGALWKGHFGPDGGYLSSEILPLRTDRFPELPFQPVPVTGEAAEAVLRLLAESSEGVERMLPELEPWARPPPSPE VRGRE
Specific function: Essential for the synthesis of the polyglutamate capsule of B.anthracis which is one of the principal virulence factors during anthrax infection. May form a polyglutamyl synthetase complex together with proteins CapB and CapC [H]
COG id: COG2843
COG function: function code M; Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CapA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019079 [H]
Pfam domain/function: PF09587 PGA_cap [H]
EC number: NA
Molecular weight: Translated: 43575; Mature: 43575
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHVALLLLMLSACHPRTIPPPEPLPPEEPAGQSPAPGDAGQAPAPPIGAPAAEPPARSV CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE SIIVGGDVTLGHNYQTHYDAETAKGRPQDALLAYGFQEVKPLTDAADLFVVNLECPFTER EEEECCCEEECCCCCCCCCCHHCCCCCHHHHHHHCHHHHCCCCCCCEEEEEEEECCCHHH GEKLPKNFNFRAKPELVGILTAGGVDVVSLANNHLMDYGAQGLLDTLDTLDAAHIPYFGA HHHCCCCCCCCCCCCEEEEEECCCEEEEHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCC GRNLAEARRPAIVTVGGQRVALLGYFFLGTRNIEPPGVYATETTPGVAGHFSDEAVMEQM CCCHHHHCCCEEEEECCCEEEEEEEHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHH LREDIAAARAQADIVLPYFHWGREGTYTPEPYQVRLAHVAIDAGAAGVLGAHPHVLQAME HHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHH LYQGRPVVYSLGNFVFGGNWNPRDKRGALWKGHFGPDGGYLSSEILPLRTDRFPELPFQP HHCCCCEEEECCCEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCEECCCCCCCCCCCCC VPVTGEAAEAVLRLLAESSEGVERMLPELEPWARPPPSPEVRGRE CCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRHVALLLLMLSACHPRTIPPPEPLPPEEPAGQSPAPGDAGQAPAPPIGAPAAEPPARSV CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE SIIVGGDVTLGHNYQTHYDAETAKGRPQDALLAYGFQEVKPLTDAADLFVVNLECPFTER EEEECCCEEECCCCCCCCCCHHCCCCCHHHHHHHCHHHHCCCCCCCEEEEEEEECCCHHH GEKLPKNFNFRAKPELVGILTAGGVDVVSLANNHLMDYGAQGLLDTLDTLDAAHIPYFGA HHHCCCCCCCCCCCCEEEEEECCCEEEEHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCC GRNLAEARRPAIVTVGGQRVALLGYFFLGTRNIEPPGVYATETTPGVAGHFSDEAVMEQM CCCHHHHCCCEEEEECCCEEEEEEEHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHH LREDIAAARAQADIVLPYFHWGREGTYTPEPYQVRLAHVAIDAGAAGVLGAHPHVLQAME HHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHH LYQGRPVVYSLGNFVFGGNWNPRDKRGALWKGHFGPDGGYLSSEILPLRTDRFPELPFQP HHCCCCEEEECCCEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCEECCCCCCCCCCCCC VPVTGEAAEAVLRLLAESSEGVERMLPELEPWARPPPSPEVRGRE CCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2536679; 10475962; 12004073 [H]