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The map label for this gene is ybiT [H]

Identifier: 108760789

GI number: 108760789

Start: 5724902

End: 5726500

Strand: Direct

Name: ybiT [H]

Synonym: MXAN_4586

Alternate gene names: 108760789

Gene position: 5724902-5726500 (Clockwise)

Preceding gene: 108759359

Following gene: 108762437

Centisome position: 62.64

GC content: 65.17

Gene sequence:

>1599_bases
ATGTTCAACGTCATCAACGTCTCCAAGGCCTACGGGCCCAAGAAGCTTTTCGAGGACGTCAACGTCACGTTCTCGCCGGG
CCGCCGCTACGGCCTGACCGGTCCGAACGGGGCCGGGAAGTCCACGTTCATGAAGATCCTCGCCGGGGACGAGGAAGCGG
ACATGGGCAACATCGTCCGGCCTCGCAAGCTGGGAATCCTGCGCCAGGACCACTTCCGCTACGAGGACAACCGCGTCCTC
GACGTGGTGCTCATGGGCAACCGCGCCCTGTGGGCGGCCATGTCCGAGAAGAACGAGCTGCTGGCCAAGTCCGACATCAC
CGAGGAGGACGGCAACCGGCTGGGCGACCTGGAGGGCGTCATCGCCGAGGAGGACGGCTACTCGGCGGAGAGCGACGCGG
CCACCCTGCTGGCGGGCCTTGGCATCGACCAGGCCTCCCACGAAGAGCCCATGAAGCAGCTCACCGGCGGCCTCAAGCTC
CGCGTGCTGCTCGCGCAGGCGCTGTTCGGCAAGCCGGAAGGCCTGCTCCTCGACGAGCCCACGAACAACCTGGACATCGA
CTCCATCCGCTGGCTGGAGAGCTTCCTCCACGACTACGAGGGCGTGCTCATCACCATCAGCCACGACCGGCACTTCCTCA
ACGCCATCTGCACGCACATCGCGGACATCGACTACGAGACCATCATCCACTACCCCGGTGGGTATGACGACATGGTCCGG
CAGAAGGCGCAGGTGCGCAGCCGCGTCGAGTCCGAGACGGAGGAGAAGAAGAAGAAGATTGCCCAGCTCCAGGACTTCGT
CGCGCGCTTCCACGCCGGCACCCGCGCCTCGCAGGTGCAGAGCCGCATCAAGCAGATCGACAAGCTGAAGTCGGACGACC
TCAAGCGCTCCAACATCGCGCGCCCGTTCATCCGCTTCGACCAGAAGGTGGTCAGCGGCAAGCAGACGCTGATGGTCGAA
GGCATCCACAAGTCCTTCGAGGGCCAGGAGGTCATCAAGCCCTTCAACGCCCTGGTCTGCAAGGGCGAGAAGGTCTGCGT
CATCGGCCGCAACGGCGTGGGCAAGTCCACGCTGGTGAAGATGATTGCCGGCCAGTTGGAGCCGGACGGCGGGAAGATTG
GCTGGGGCCACCAGGCCTCCGTGGGCTACCTGCCGCAGGACCACCACGGCGTCGTGCGCAAGGGCACCACCTGCTTCGGC
TGGCTGCGTGACCTGCACGACAAGCTCACCAACGAGGAGATCTCCGGCGTGCTGGGCCGGATGCTCTTCTCCGGTGAGGA
GCGGATGAAGAACACCGACACCCTCTCCGGTGGTGAGACGGTGCGGCTGCTCCTGTCCAAGCTGATGATCATGCAGGACA
ACGTGCTGGTGCTCGACGAGCCCACCAACCACCTGGACCTCGAGTCCATCGCCGCGCTGGCCGAAGGCCTCCAGAAGTAC
GAGGGCACGGTCATCGTCGTCACGCACGACCAGGAGCTCATCTCCGAGGTGGCCACCCGCATCTGGTCGCTCCAGGCGGG
CAAGGAAGTGCTCGACTTCAACGGGCCCTACTCGGAGTTCGTGGAGAAGCACTCCGACGTCGCCGCGCGCCGCCGGTAG

Upstream 100 bases:

>100_bases
CCTTCCCAGCGGTTACATGGAGTCCTCGCGGTCTCCTGCAGAACGCGAAACACGTCGCCGCTTTGGCCCACCGCACCATT
TCCGCTACAACGCCGCCGCC

Downstream 100 bases:

>100_bases
GGACAGGCACGACGCGGAAACACGAATCGCCGCCCGGCCCGGGGATACGCTCCCGGGACGAGGCGGCGATTGTCGTTGCG
CCGTCTGGCGCGAGCTACGG

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MFNVINVSKAYGPKKLFEDVNVTFSPGRRYGLTGPNGAGKSTFMKILAGDEEADMGNIVRPRKLGILRQDHFRYEDNRVL
DVVLMGNRALWAAMSEKNELLAKSDITEEDGNRLGDLEGVIAEEDGYSAESDAATLLAGLGIDQASHEEPMKQLTGGLKL
RVLLAQALFGKPEGLLLDEPTNNLDIDSIRWLESFLHDYEGVLITISHDRHFLNAICTHIADIDYETIIHYPGGYDDMVR
QKAQVRSRVESETEEKKKKIAQLQDFVARFHAGTRASQVQSRIKQIDKLKSDDLKRSNIARPFIRFDQKVVSGKQTLMVE
GIHKSFEGQEVIKPFNALVCKGEKVCVIGRNGVGKSTLVKMIAGQLEPDGGKIGWGHQASVGYLPQDHHGVVRKGTTCFG
WLRDLHDKLTNEEISGVLGRMLFSGEERMKNTDTLSGGETVRLLLSKLMIMQDNVLVLDEPTNHLDLESIAALAEGLQKY
EGTVIVVTHDQELISEVATRIWSLQAGKEVLDFNGPYSEFVEKHSDVAARRR

Sequences:

>Translated_532_residues
MFNVINVSKAYGPKKLFEDVNVTFSPGRRYGLTGPNGAGKSTFMKILAGDEEADMGNIVRPRKLGILRQDHFRYEDNRVL
DVVLMGNRALWAAMSEKNELLAKSDITEEDGNRLGDLEGVIAEEDGYSAESDAATLLAGLGIDQASHEEPMKQLTGGLKL
RVLLAQALFGKPEGLLLDEPTNNLDIDSIRWLESFLHDYEGVLITISHDRHFLNAICTHIADIDYETIIHYPGGYDDMVR
QKAQVRSRVESETEEKKKKIAQLQDFVARFHAGTRASQVQSRIKQIDKLKSDDLKRSNIARPFIRFDQKVVSGKQTLMVE
GIHKSFEGQEVIKPFNALVCKGEKVCVIGRNGVGKSTLVKMIAGQLEPDGGKIGWGHQASVGYLPQDHHGVVRKGTTCFG
WLRDLHDKLTNEEISGVLGRMLFSGEERMKNTDTLSGGETVRLLLSKLMIMQDNVLVLDEPTNHLDLESIAALAEGLQKY
EGTVIVVTHDQELISEVATRIWSLQAGKEVLDFNGPYSEFVEKHSDVAARRR
>Mature_532_residues
MFNVINVSKAYGPKKLFEDVNVTFSPGRRYGLTGPNGAGKSTFMKILAGDEEADMGNIVRPRKLGILRQDHFRYEDNRVL
DVVLMGNRALWAAMSEKNELLAKSDITEEDGNRLGDLEGVIAEEDGYSAESDAATLLAGLGIDQASHEEPMKQLTGGLKL
RVLLAQALFGKPEGLLLDEPTNNLDIDSIRWLESFLHDYEGVLITISHDRHFLNAICTHIADIDYETIIHYPGGYDDMVR
QKAQVRSRVESETEEKKKKIAQLQDFVARFHAGTRASQVQSRIKQIDKLKSDDLKRSNIARPFIRFDQKVVSGKQTLMVE
GIHKSFEGQEVIKPFNALVCKGEKVCVIGRNGVGKSTLVKMIAGQLEPDGGKIGWGHQASVGYLPQDHHGVVRKGTTCFG
WLRDLHDKLTNEEISGVLGRMLFSGEERMKNTDTLSGGETVRLLLSKLMIMQDNVLVLDEPTNHLDLESIAALAEGLQKY
EGTVIVVTHDQELISEVATRIWSLQAGKEVLDFNGPYSEFVEKHSDVAARRR

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=513, Percent_Identity=31.7738791423002, Blast_Score=253, Evalue=2e-67,
Organism=Homo sapiens, GI27881506, Length=508, Percent_Identity=29.9212598425197, Blast_Score=222, Evalue=6e-58,
Organism=Homo sapiens, GI10947137, Length=508, Percent_Identity=29.9212598425197, Blast_Score=222, Evalue=7e-58,
Organism=Homo sapiens, GI69354671, Length=532, Percent_Identity=28.7593984962406, Blast_Score=206, Evalue=5e-53,
Organism=Homo sapiens, GI10947135, Length=534, Percent_Identity=29.2134831460674, Blast_Score=206, Evalue=6e-53,
Organism=Escherichia coli, GI1787041, Length=520, Percent_Identity=47.1153846153846, Blast_Score=489, Evalue=1e-139,
Organism=Escherichia coli, GI1789751, Length=535, Percent_Identity=32.5233644859813, Blast_Score=282, Evalue=5e-77,
Organism=Escherichia coli, GI1787182, Length=516, Percent_Identity=31.5891472868217, Blast_Score=246, Evalue=3e-66,
Organism=Escherichia coli, GI2367384, Length=536, Percent_Identity=32.089552238806, Blast_Score=243, Evalue=2e-65,
Organism=Escherichia coli, GI87081782, Length=510, Percent_Identity=24.9019607843137, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1788165, Length=190, Percent_Identity=30, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI87081791, Length=218, Percent_Identity=28.8990825688073, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1789593, Length=220, Percent_Identity=30.4545454545455, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI48995001, Length=212, Percent_Identity=27.8301886792453, Blast_Score=62, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI17553372, Length=513, Percent_Identity=33.1384015594542, Blast_Score=261, Evalue=9e-70,
Organism=Caenorhabditis elegans, GI17555318, Length=543, Percent_Identity=29.8342541436464, Blast_Score=234, Evalue=1e-61,
Organism=Caenorhabditis elegans, GI17559834, Length=516, Percent_Identity=28.1007751937984, Blast_Score=221, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI17555800, Length=503, Percent_Identity=23.4592445328032, Blast_Score=84, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6321121, Length=554, Percent_Identity=29.7833935018051, Blast_Score=234, Evalue=2e-62,
Organism=Saccharomyces cerevisiae, GI6320874, Length=525, Percent_Identity=30.6666666666667, Blast_Score=234, Evalue=3e-62,
Organism=Saccharomyces cerevisiae, GI6325030, Length=384, Percent_Identity=26.3020833333333, Blast_Score=122, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6324314, Length=379, Percent_Identity=24.5382585751979, Blast_Score=112, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6323278, Length=379, Percent_Identity=24.5382585751979, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24666836, Length=506, Percent_Identity=32.4110671936759, Blast_Score=271, Evalue=1e-72,
Organism=Drosophila melanogaster, GI24641342, Length=512, Percent_Identity=32.03125, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI24642252, Length=514, Percent_Identity=30.9338521400778, Blast_Score=232, Evalue=4e-61,
Organism=Drosophila melanogaster, GI18859989, Length=514, Percent_Identity=30.9338521400778, Blast_Score=232, Evalue=4e-61,
Organism=Drosophila melanogaster, GI116007184, Length=238, Percent_Identity=27.3109243697479, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI221500365, Length=238, Percent_Identity=27.3109243697479, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 59251; Mature: 59251

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNVINVSKAYGPKKLFEDVNVTFSPGRRYGLTGPNGAGKSTFMKILAGDEEADMGNIVR
CCCEEECHHHCCHHHHHHCCCCEECCCCEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCC
PRKLGILRQDHFRYEDNRVLDVVLMGNRALWAAMSEKNELLAKSDITEEDGNRLGDLEGV
CHHHCCHHHHCCCCCCCCEEEEEEECCCCEEHHHHHHHHHHHHCCCCHHCCCCCCCCCCE
IAEEDGYSAESDAATLLAGLGIDQASHEEPMKQLTGGLKLRVLLAQALFGKPEGLLLDEP
EECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECC
TNNLDIDSIRWLESFLHDYEGVLITISHDRHFLNAICTHIADIDYETIIHYPGGYDDMVR
CCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHH
QKAQVRSRVESETEEKKKKIAQLQDFVARFHAGTRASQVQSRIKQIDKLKSDDLKRSNIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHCC
RPFIRFDQKVVSGKQTLMVEGIHKSFEGQEVIKPFNALVCKGEKVCVIGRNGVGKSTLVK
HHHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHEECCCEEEEECCCCCCHHHHHH
MIAGQLEPDGGKIGWGHQASVGYLPQDHHGVVRKGTTCFGWLRDLHDKLTNEEISGVLGR
HHHHCCCCCCCEECCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCHHHHHHHHHH
MLFSGEERMKNTDTLSGGETVRLLLSKLMIMQDNVLVLDEPTNHLDLESIAALAEGLQKY
HHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHH
EGTVIVVTHDQELISEVATRIWSLQAGKEVLDFNGPYSEFVEKHSDVAARRR
CCEEEEEECCHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFNVINVSKAYGPKKLFEDVNVTFSPGRRYGLTGPNGAGKSTFMKILAGDEEADMGNIVR
CCCEEECHHHCCHHHHHHCCCCEECCCCEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCC
PRKLGILRQDHFRYEDNRVLDVVLMGNRALWAAMSEKNELLAKSDITEEDGNRLGDLEGV
CHHHCCHHHHCCCCCCCCEEEEEEECCCCEEHHHHHHHHHHHHCCCCHHCCCCCCCCCCE
IAEEDGYSAESDAATLLAGLGIDQASHEEPMKQLTGGLKLRVLLAQALFGKPEGLLLDEP
EECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECC
TNNLDIDSIRWLESFLHDYEGVLITISHDRHFLNAICTHIADIDYETIIHYPGGYDDMVR
CCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHH
QKAQVRSRVESETEEKKKKIAQLQDFVARFHAGTRASQVQSRIKQIDKLKSDDLKRSNIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHCC
RPFIRFDQKVVSGKQTLMVEGIHKSFEGQEVIKPFNALVCKGEKVCVIGRNGVGKSTLVK
HHHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHEECCCEEEEECCCCCCHHHHHH
MIAGQLEPDGGKIGWGHQASVGYLPQDHHGVVRKGTTCFGWLRDLHDKLTNEEISGVLGR
HHHHCCCCCCCEECCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCHHHHHHHHHH
MLFSGEERMKNTDTLSGGETVRLLLSKLMIMQDNVLVLDEPTNHLDLESIAALAEGLQKY
HHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHH
EGTVIVVTHDQELISEVATRIWSLQAGKEVLDFNGPYSEFVEKHSDVAARRR
CCEEEEEECCHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]