| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760786
Identifier: 108760786
GI number: 108760786
Start: 4251546
End: 4252985
Strand: Direct
Name: 108760786
Synonym: MXAN_3625
Alternate gene names: NA
Gene position: 4251546-4252985 (Clockwise)
Preceding gene: 108763353
Following gene: 108762076
Centisome position: 46.52
GC content: 69.38
Gene sequence:
>1440_bases ATGAGCGCGCCCGAGCCGATTCCCGGCGGACAATTCTCTCCAGAAGTCAAAGCGCTGCACGGTCAGCTTTCCCCTGCCGC CGCTGCGTTCCTGGAGTTCACAAAGCGCGTCCCCGAGGCCCTTTCGCGCCACAAGTTCAAGCCGCATGAGGCGTCGCCGT TCATCACCTATGAGCTGCATGCGTGGCCCACCTTCGTGGAGGGCCCGGTTGCACGACAGATGCGAGAGGTCGCCCCGGCG CTCTGCCAACTCATCAAGCGAGCCCCCCGGCGCCTGCTGGGGGCCACGGATCGCGCGGCGGCGTTCTACGGGCTTCCGCA TGAGCGGGCGCACGCGGCGCTCGATGCCCTGGCGCGGACGGATGACGCCCGCGGAGCCATTGGCCGTGGTGACTTCATCC ATGACGGCACGGCCTTCAAGTGCGTGGAGTTCAACCTGACCGCGGGTGTCGGGGGCTGGGAGACGGCCATCCACGTCCAA CAGGTGCTGGCGCAGCCCGCGATGCAGCGCTTCGCCATGGAGCAACGGCTGCGCGTCCGTCAGCCGCGGACGCTGCGCGA TTTCTTCTCCAACGTTGTCGACACCGTGCGGCGCGACGTCAACTGGGAAGGGGAGTGCAACATCGGCATCCTCTTCTCCC CGAGCACCTTGCCGGAAGCAGGCCCGGCGGAGCAGGTGAGCCGGTTCTTCACCGCTCAGCTCCAGGAACTCCTCCAGCCC GAAGGCGCGCGCGGCGAGGTTCTCCTGGCCACCTATGGCTCGGTGGAATCAGAGCCCGGCGCCCACCTCACGCTCCGGGG CAAGCGGCTGCACGCCGTTGTGGAGTACGACGCGCGAGACAGGCTGGCGATGGCGGGAGCGACCTACGTCGCGCAGGCCC AGGCCGCGTTCGATGCCCGGACGGTCAGCCTCCTCAACGGCCCGGCGCAGGATGTGCTCGACGACAAGCGCAACCTCGCG CTGCTCTGGGAGCACGTGACGTCGCCCGCGCTGTCCGAGGCGGAACAGGAGTTGGTGCGCCGGAACGTGCCCTGGTCATG CCGGGTCGAACGGACGCACGTCGAGCGGGACGGGGCGCGGTACCTGGTTCCGGAGCTGCTGGCCTCGCAACGCGAGTCCC TGGTCCTCAAGCCGGGCCGGGACTACGGCGGCGAGTCCGTTCTGGTGGGTGGGACGACCTCCGCCGCGGACTGGGACACG GCCGTGCGCAAGGCGCTCGACGTGGGCGGCTGGGTGGCGCAGGAGCGCGTGCACCCGACGCCCCTCCATACGCTGGGACC GGAAGGCACGGTGGTGCCCTACATCGCCGTCTGGGGGCTCTTCGTGCTCGGAGAGACCTACGGCGGGCACTTCCTCCGCA TGTGCCCCATGCGGCGGGGCACTGGCGTGGTGAACGTCGCGCAGGGCGCCATCGTGGGCGCCCTCATCGAACTGGAGTGA
Upstream 100 bases:
>100_bases GCCGCTACACGAGCGAGCTGCGGCTGGTCTGCGAGATGTCTTGAGCAGCCCGAGGCCTTTCAACGGTTTCACCCTTGTTC ATTGAAGGAGCCGTACGCCC
Downstream 100 bases:
>100_bases GGCCTCGGGGCCGCGTTACTGCTCGCGGTACTCGCGGCCCAGCTTCTGCTGCTTGCGGATGCGGCCCACCGCGCTCAGGG CAATGGAGGGGATGAGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MSAPEPIPGGQFSPEVKALHGQLSPAAAAFLEFTKRVPEALSRHKFKPHEASPFITYELHAWPTFVEGPVARQMREVAPA LCQLIKRAPRRLLGATDRAAAFYGLPHERAHAALDALARTDDARGAIGRGDFIHDGTAFKCVEFNLTAGVGGWETAIHVQ QVLAQPAMQRFAMEQRLRVRQPRTLRDFFSNVVDTVRRDVNWEGECNIGILFSPSTLPEAGPAEQVSRFFTAQLQELLQP EGARGEVLLATYGSVESEPGAHLTLRGKRLHAVVEYDARDRLAMAGATYVAQAQAAFDARTVSLLNGPAQDVLDDKRNLA LLWEHVTSPALSEAEQELVRRNVPWSCRVERTHVERDGARYLVPELLASQRESLVLKPGRDYGGESVLVGGTTSAADWDT AVRKALDVGGWVAQERVHPTPLHTLGPEGTVVPYIAVWGLFVLGETYGGHFLRMCPMRRGTGVVNVAQGAIVGALIELE
Sequences:
>Translated_479_residues MSAPEPIPGGQFSPEVKALHGQLSPAAAAFLEFTKRVPEALSRHKFKPHEASPFITYELHAWPTFVEGPVARQMREVAPA LCQLIKRAPRRLLGATDRAAAFYGLPHERAHAALDALARTDDARGAIGRGDFIHDGTAFKCVEFNLTAGVGGWETAIHVQ QVLAQPAMQRFAMEQRLRVRQPRTLRDFFSNVVDTVRRDVNWEGECNIGILFSPSTLPEAGPAEQVSRFFTAQLQELLQP EGARGEVLLATYGSVESEPGAHLTLRGKRLHAVVEYDARDRLAMAGATYVAQAQAAFDARTVSLLNGPAQDVLDDKRNLA LLWEHVTSPALSEAEQELVRRNVPWSCRVERTHVERDGARYLVPELLASQRESLVLKPGRDYGGESVLVGGTTSAADWDT AVRKALDVGGWVAQERVHPTPLHTLGPEGTVVPYIAVWGLFVLGETYGGHFLRMCPMRRGTGVVNVAQGAIVGALIELE >Mature_478_residues SAPEPIPGGQFSPEVKALHGQLSPAAAAFLEFTKRVPEALSRHKFKPHEASPFITYELHAWPTFVEGPVARQMREVAPAL CQLIKRAPRRLLGATDRAAAFYGLPHERAHAALDALARTDDARGAIGRGDFIHDGTAFKCVEFNLTAGVGGWETAIHVQQ VLAQPAMQRFAMEQRLRVRQPRTLRDFFSNVVDTVRRDVNWEGECNIGILFSPSTLPEAGPAEQVSRFFTAQLQELLQPE GARGEVLLATYGSVESEPGAHLTLRGKRLHAVVEYDARDRLAMAGATYVAQAQAAFDARTVSLLNGPAQDVLDDKRNLAL LWEHVTSPALSEAEQELVRRNVPWSCRVERTHVERDGARYLVPELLASQRESLVLKPGRDYGGESVLVGGTTSAADWDTA VRKALDVGGWVAQERVHPTPLHTLGPEGTVVPYIAVWGLFVLGETYGGHFLRMCPMRRGTGVVNVAQGAIVGALIELE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52427; Mature: 52296
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPEPIPGGQFSPEVKALHGQLSPAAAAFLEFTKRVPEALSRHKFKPHEASPFITYELH CCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE AWPTFVEGPVARQMREVAPALCQLIKRAPRRLLGATDRAAAFYGLPHERAHAALDALART CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHC DDARGAIGRGDFIHDGTAFKCVEFNLTAGVGGWETAIHVQQVLAQPAMQRFAMEQRLRVR CCCCCCCCCCCEEECCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC QPRTLRDFFSNVVDTVRRDVNWEGECNIGILFSPSTLPEAGPAEQVSRFFTAQLQELLQP CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC EGARGEVLLATYGSVESEPGAHLTLRGKRLHAVVEYDARDRLAMAGATYVAQAQAAFDAR CCCCCCEEEEECCCCCCCCCCEEEEECCEEEEEEEECCCCHHHHHCHHHHHHHHHHHHHH TVSLLNGPAQDVLDDKRNLALLWEHVTSPALSEAEQELVRRNVPWSCRVERTHVERDGAR HHHHHCCCHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCH YLVPELLASQRESLVLKPGRDYGGESVLVGGTTSAADWDTAVRKALDVGGWVAQERVHPT HHHHHHHHCCCCCEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHCCCCCC PLHTLGPEGTVVPYIAVWGLFVLGETYGGHFLRMCPMRRGTGVVNVAQGAIVGALIELE CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEECCCCEEEEEEECC >Mature Secondary Structure SAPEPIPGGQFSPEVKALHGQLSPAAAAFLEFTKRVPEALSRHKFKPHEASPFITYELH CCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE AWPTFVEGPVARQMREVAPALCQLIKRAPRRLLGATDRAAAFYGLPHERAHAALDALART CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHC DDARGAIGRGDFIHDGTAFKCVEFNLTAGVGGWETAIHVQQVLAQPAMQRFAMEQRLRVR CCCCCCCCCCCEEECCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC QPRTLRDFFSNVVDTVRRDVNWEGECNIGILFSPSTLPEAGPAEQVSRFFTAQLQELLQP CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC EGARGEVLLATYGSVESEPGAHLTLRGKRLHAVVEYDARDRLAMAGATYVAQAQAAFDAR CCCCCCEEEEECCCCCCCCCCEEEEECCEEEEEEEECCCCHHHHHCHHHHHHHHHHHHHH TVSLLNGPAQDVLDDKRNLALLWEHVTSPALSEAEQELVRRNVPWSCRVERTHVERDGAR HHHHHCCCHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCH YLVPELLASQRESLVLKPGRDYGGESVLVGGTTSAADWDTAVRKALDVGGWVAQERVHPT HHHHHHHHCCCCCEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHCCCCCC PLHTLGPEGTVVPYIAVWGLFVLGETYGGHFLRMCPMRRGTGVVNVAQGAIVGALIELE CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA