Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
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Accession | NC_008095 |
Length | 9,139,763 |
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The map label for this gene is yfiS [H]
Identifier: 108760538
GI number: 108760538
Start: 5778751
End: 5780049
Strand: Direct
Name: yfiS [H]
Synonym: MXAN_4605
Alternate gene names: 108760538
Gene position: 5778751-5780049 (Clockwise)
Preceding gene: 108762912
Following gene: 108757910
Centisome position: 63.23
GC content: 68.21
Gene sequence:
>1299_bases GTGCTGCGCTTCGCCATCATCTGGGGCAGCCAGACGGTGTCGAAGCTCGGCAGCGCCCTGACCAGCTTCGCCCTGGGGCT CTGGGTGTATGGCCTCACCAGCTCGGTCACGGATTTCGCGCTGATCTCCGTGCTGACCATCCTGCCCGGGGTGCTCGTGG CACCCATCGTGGGGGTGCTGGTGGATCGCTGGGATCTCCGGAACGCGATGCGTCTGGGAGATTGCGGCGCGGGGTTGGTC ACCCTCGTCTATGCCATTCTGATCTCGTTCGATCAGCTCGCGCCCTGGCACGTCTACGTAGGCACCGCCCTCGCGTCGGT GAGCGGTGCGCTTCAACGGACGTCGTACACCGCCCTGACGCCAGCACTCGTCCCCGCGAAGCACCTGGGCCGCGCCAACG GCCTCGTCCAGGCGAGCGATGCCGCCGTGCCCCTGATCGCCCCTCCCTTGGCGGGGTTCCTGATGAGCGCCACCAGCCTG GGCACGGTGGTCTTGATCGACTTCATCAGCTGCCTGGCCGCCATCACCACGTTGTCGCTCATTCGGAGCCTGCCCACGGG GAGCGGGGCCTCCTCGGATGCGAGCACATCCGCGCTGCAACAAGCCCTCGAAGGGTGGAACTACCTCAAGGCACGCCGGG GTCTGCTCGGTTTGCTCGCGTTCTCCGTCACCACCAACTGCTCGCTCTCCGCCATGCAGGTGCTGCTTCCTCCGCTGGTG CTGGACATCGCCAACCCGGCCGTTCTCGGGGGACTCCTGTCCACGGGGGGTCTGGGGCTCCTGATGGGGAGCGTCGTGAT GACCGCGTGGGGCGGGCCGAAGAACCGCATCCATGGGGTGCTCGGAGTCGGGGTGGGCCTGGGGACGGTCATGGTGCTCG CAGGGCTGTTCCCCACCCTGAGGATGCTCGGGTATTGCACCTTCATGGCGGGATTCTGCATCCCCATCATGGATGCAAGC AGCCAGGCCATCTGGCAGGGGCAGGTCCCCGCCGCACTCCGGGGACGCGTCTTCGCCATGCGCGGGATGATTGCCTGGTC CGTCCAGCCGCTGGCGTACCTTGCGGCGGGCGTCATCGCGGACCACCTGGACGGCGTCTCCTTCTCCATCCCCGCGCTCT TCGGGCCGCTGGAACAACTCGACGCGCGCAGCCGGGGCATCGCCCTGTGCTTCATCGCCGCCGGCCTCTTGGCGCTCATC GCGGCGGTGCGGGGCTATACCGCCCGCCACGTCCGCGAAGTCGAGGAGATGCCACCAGGCCCCCCCTTCACCGGGGCCGT GTCCCCGCCTTCGCGGTAA
Upstream 100 bases:
>100_bases CGGCACGCATTGCCCTGGGGATGAAGCTGCAAGAGGCCTATTCCTCCCTGCACCGCAGGTCCCCCGCGTCTGAGCAGCGA TGAGCGAGTCAGGGACCGGC
Downstream 100 bases:
>100_bases GGGGCCTCAGTTCCGCGTCAGCGTCAGGTCATCCACCTGAATCCAGGTGTCGCCGGTGTTCGCCCACATTCCCGCGAACA CCTCCACGCTGTGCTGGGCG
Product: major facilitator family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MLRFAIIWGSQTVSKLGSALTSFALGLWVYGLTSSVTDFALISVLTILPGVLVAPIVGVLVDRWDLRNAMRLGDCGAGLV TLVYAILISFDQLAPWHVYVGTALASVSGALQRTSYTALTPALVPAKHLGRANGLVQASDAAVPLIAPPLAGFLMSATSL GTVVLIDFISCLAAITTLSLIRSLPTGSGASSDASTSALQQALEGWNYLKARRGLLGLLAFSVTTNCSLSAMQVLLPPLV LDIANPAVLGGLLSTGGLGLLMGSVVMTAWGGPKNRIHGVLGVGVGLGTVMVLAGLFPTLRMLGYCTFMAGFCIPIMDAS SQAIWQGQVPAALRGRVFAMRGMIAWSVQPLAYLAAGVIADHLDGVSFSIPALFGPLEQLDARSRGIALCFIAAGLLALI AAVRGYTARHVREVEEMPPGPPFTGAVSPPSR
Sequences:
>Translated_432_residues MLRFAIIWGSQTVSKLGSALTSFALGLWVYGLTSSVTDFALISVLTILPGVLVAPIVGVLVDRWDLRNAMRLGDCGAGLV TLVYAILISFDQLAPWHVYVGTALASVSGALQRTSYTALTPALVPAKHLGRANGLVQASDAAVPLIAPPLAGFLMSATSL GTVVLIDFISCLAAITTLSLIRSLPTGSGASSDASTSALQQALEGWNYLKARRGLLGLLAFSVTTNCSLSAMQVLLPPLV LDIANPAVLGGLLSTGGLGLLMGSVVMTAWGGPKNRIHGVLGVGVGLGTVMVLAGLFPTLRMLGYCTFMAGFCIPIMDAS SQAIWQGQVPAALRGRVFAMRGMIAWSVQPLAYLAAGVIADHLDGVSFSIPALFGPLEQLDARSRGIALCFIAAGLLALI AAVRGYTARHVREVEEMPPGPPFTGAVSPPSR >Mature_432_residues MLRFAIIWGSQTVSKLGSALTSFALGLWVYGLTSSVTDFALISVLTILPGVLVAPIVGVLVDRWDLRNAMRLGDCGAGLV TLVYAILISFDQLAPWHVYVGTALASVSGALQRTSYTALTPALVPAKHLGRANGLVQASDAAVPLIAPPLAGFLMSATSL GTVVLIDFISCLAAITTLSLIRSLPTGSGASSDASTSALQQALEGWNYLKARRGLLGLLAFSVTTNCSLSAMQVLLPPLV LDIANPAVLGGLLSTGGLGLLMGSVVMTAWGGPKNRIHGVLGVGVGLGTVMVLAGLFPTLRMLGYCTFMAGFCIPIMDAS SQAIWQGQVPAALRGRVFAMRGMIAWSVQPLAYLAAGVIADHLDGVSFSIPALFGPLEQLDARSRGIALCFIAAGLLALI AAVRGYTARHVREVEEMPPGPPFTGAVSPPSR
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 44747; Mature: 44747
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRFAIIWGSQTVSKLGSALTSFALGLWVYGLTSSVTDFALISVLTILPGVLVAPIVGVL CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDRWDLRNAMRLGDCGAGLVTLVYAILISFDQLAPWHVYVGTALASVSGALQRTSYTALT HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHC PALVPAKHLGRANGLVQASDAAVPLIAPPLAGFLMSATSLGTVVLIDFISCLAAITTLSL HHHHCHHHHCCCCCCEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRSLPTGSGASSDASTSALQQALEGWNYLKARRGLLGLLAFSVTTNCSLSAMQVLLPPLV HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LDIANPAVLGGLLSTGGLGLLMGSVVMTAWGGPKNRIHGVLGVGVGLGTVMVLAGLFPTL HHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RMLGYCTFMAGFCIPIMDASSQAIWQGQVPAALRGRVFAMRGMIAWSVQPLAYLAAGVIA HHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DHLDGVSFSIPALFGPLEQLDARSRGIALCFIAAGLLALIAAVRGYTARHVREVEEMPPG HHHCCCCEEHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCC PPFTGAVSPPSR CCCCCCCCCCCC >Mature Secondary Structure MLRFAIIWGSQTVSKLGSALTSFALGLWVYGLTSSVTDFALISVLTILPGVLVAPIVGVL CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDRWDLRNAMRLGDCGAGLVTLVYAILISFDQLAPWHVYVGTALASVSGALQRTSYTALT HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHC PALVPAKHLGRANGLVQASDAAVPLIAPPLAGFLMSATSLGTVVLIDFISCLAAITTLSL HHHHCHHHHCCCCCCEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRSLPTGSGASSDASTSALQQALEGWNYLKARRGLLGLLAFSVTTNCSLSAMQVLLPPLV HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LDIANPAVLGGLLSTGGLGLLMGSVVMTAWGGPKNRIHGVLGVGVGLGTVMVLAGLFPTL HHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RMLGYCTFMAGFCIPIMDASSQAIWQGQVPAALRGRVFAMRGMIAWSVQPLAYLAAGVIA HHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DHLDGVSFSIPALFGPLEQLDARSRGIALCFIAAGLLALIAAVRGYTARHVREVEEMPPG HHHCCCCEEHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCC PPFTGAVSPPSR CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8946165; 9384377 [H]