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The map label for this gene is yecS [H]

Identifier: 108760413

GI number: 108760413

Start: 6850112

End: 6851557

Strand: Reverse

Name: yecS [H]

Synonym: MXAN_5503

Alternate gene names: 108760413

Gene position: 6851557-6850112 (Counterclockwise)

Preceding gene: 108762196

Following gene: 108761481

Centisome position: 74.96

GC content: 70.06

Gene sequence:

>1446_bases
GTGCTGGTGCTGCTGGCGCTGCTGAGCTCGTGTGGCGCGGAACAGGACTCGGGACTGGCGCGGGTGCGCCGCACGGGGGA
GCTGCGTTGGGGCGCGGATGCCCAGGGTGGAGAGCCCTACGCCATGGAGGACCCGGACGCACCCGGGGGCATGCGAGGCT
TCGAGGTGGAACTGGCGGAGGCCCTGGCGCGTGAGCTGGGGGTTCGGGCCCGGTTCGTCCAGAACGACTGGTCCAGCCTG
GTCCCCTCGTTGGAGCGCGGCTCGTTCGACGTGGCGCTCAACGGCCTCGAAGTCACGCCGTCGCGCTCCGGGCGCATCCT
CTTCACGCGGCCCTACTACGTCTTCCACCTGCGCTTGCTGGCGCGGCGGGACGATGCGGCCATCACCGGGCTGGATGCGC
TGAAGGGCCAGCGGGTGGGGACGCTGGCCAATTCCCTGGCGTGGGACCTGCTCCAGCGCAGCGGCGTGGAGGCGGTTCCT
TACGAAGGCGTGGAGGAGCCCTACATCGACCTGGAGCAGGGGCGGGTGCGCGCCGTGTTGATGGACGACATCATCGCGCA
ACGCTACGGGCAGCCACGTCCAGGGCTCCGGGTGGTGGGCGACGTGGGGGAAGGCTACTACGCCATCGCCGTGCGGCCCG
GTGAGGAGGACCTGCGGGAGGCGCTGGACACGGCGCTGGGGAACATCGCTCGCTCGGGCGAGCTGCGCGCCATCTTCCAG
CGCTGGGGCATCGACAACGCCGAGCAGCAGCGCATGGTCGACTGGACGGACGCGCAGTCCCGCGAGGTGCTGGCGCCCAC
GCAGACGGCGCGCATGGGCTGGGGACAGCTGGTGCTGTTCCTCCAGGCCGCGGGCGTGACGCTGCTGGTGTCCGTGGGCG
CCATGGTGCTGGCCATCCCCCTGGGCGTGGGGCTGGCGCTGACGCGGCTGTACGGGCCTGGCTGGGCGGCCCGGCTGTCC
ACCGCCTACGTGGAGTTGTTTCGCGGCACGCCGGTGCTGCTTCAGCTCTACGTCCTCTACTACGGGCTGGCCGGAGTGCT
CCGGTTGGACCCCATCAGCGCGGCCATCCTCGGGCTGGGCCTGAACTACGCGGCCTACGAGTCGGAGGTCTACAGGGCGG
GCGTGCTGGCCGTTCCGCGAGGGCAGTTGGAGGCGGCGATGGCACTGGGCATGCCCCTGCGGCTGGCGCTGCGGCGGGTC
ATCCTCCCCCAGGCCTTCCGCGTGGCGCTGCCGGGGGTGGCGAACGACTTCATCGCGCTGCTCAAGGACAGCTCCTTGGT
ATCCGTCATCTCCGTGGTGGAGCTCACGAAGCGGATGACGATTACCGCGGTGGATGTTCGAAGCTGGCTGATACCTGGCG
CGTTGTGCGCATTGATGTACCTGGCAATGAGCTATCCCTTGTCCCGGCTGGCGAGGCACCTGGAAGCGAGGCTGGAGCGC
GGATGA

Upstream 100 bases:

>100_bases
GGCGGTGGGGCGGCTCCTGGCATATGGCGGGGGCCTCACACGCGCCAGAAGGAGCCCGTCACTGTCCCAGGCAATCAGGC
CTTCATTCCTCCTGCCCTGC

Downstream 100 bases:

>100_bases
TTGAGGTCGAGAAGCTGAGCAAGCGCTACGAGGGGCGGCCGGTGCTGGAGGGCATCAACGCCGTCTTCTCCCCAGGCGAG
GTGACGGCGTTGGTGGGCCC

Product: His/Glu/Gln/Arg/opine amino acid ABC transporter permease/periplasmic amino acid-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MLVLLALLSSCGAEQDSGLARVRRTGELRWGADAQGGEPYAMEDPDAPGGMRGFEVELAEALARELGVRARFVQNDWSSL
VPSLERGSFDVALNGLEVTPSRSGRILFTRPYYVFHLRLLARRDDAAITGLDALKGQRVGTLANSLAWDLLQRSGVEAVP
YEGVEEPYIDLEQGRVRAVLMDDIIAQRYGQPRPGLRVVGDVGEGYYAIAVRPGEEDLREALDTALGNIARSGELRAIFQ
RWGIDNAEQQRMVDWTDAQSREVLAPTQTARMGWGQLVLFLQAAGVTLLVSVGAMVLAIPLGVGLALTRLYGPGWAARLS
TAYVELFRGTPVLLQLYVLYYGLAGVLRLDPISAAILGLGLNYAAYESEVYRAGVLAVPRGQLEAAMALGMPLRLALRRV
ILPQAFRVALPGVANDFIALLKDSSLVSVISVVELTKRMTITAVDVRSWLIPGALCALMYLAMSYPLSRLARHLEARLER
G

Sequences:

>Translated_481_residues
MLVLLALLSSCGAEQDSGLARVRRTGELRWGADAQGGEPYAMEDPDAPGGMRGFEVELAEALARELGVRARFVQNDWSSL
VPSLERGSFDVALNGLEVTPSRSGRILFTRPYYVFHLRLLARRDDAAITGLDALKGQRVGTLANSLAWDLLQRSGVEAVP
YEGVEEPYIDLEQGRVRAVLMDDIIAQRYGQPRPGLRVVGDVGEGYYAIAVRPGEEDLREALDTALGNIARSGELRAIFQ
RWGIDNAEQQRMVDWTDAQSREVLAPTQTARMGWGQLVLFLQAAGVTLLVSVGAMVLAIPLGVGLALTRLYGPGWAARLS
TAYVELFRGTPVLLQLYVLYYGLAGVLRLDPISAAILGLGLNYAAYESEVYRAGVLAVPRGQLEAAMALGMPLRLALRRV
ILPQAFRVALPGVANDFIALLKDSSLVSVISVVELTKRMTITAVDVRSWLIPGALCALMYLAMSYPLSRLARHLEARLER
G
>Mature_481_residues
MLVLLALLSSCGAEQDSGLARVRRTGELRWGADAQGGEPYAMEDPDAPGGMRGFEVELAEALARELGVRARFVQNDWSSL
VPSLERGSFDVALNGLEVTPSRSGRILFTRPYYVFHLRLLARRDDAAITGLDALKGQRVGTLANSLAWDLLQRSGVEAVP
YEGVEEPYIDLEQGRVRAVLMDDIIAQRYGQPRPGLRVVGDVGEGYYAIAVRPGEEDLREALDTALGNIARSGELRAIFQ
RWGIDNAEQQRMVDWTDAQSREVLAPTQTARMGWGQLVLFLQAAGVTLLVSVGAMVLAIPLGVGLALTRLYGPGWAARLS
TAYVELFRGTPVLLQLYVLYYGLAGVLRLDPISAAILGLGLNYAAYESEVYRAGVLAVPRGQLEAAMALGMPLRLALRRV
ILPQAFRVALPGVANDFIALLKDSSLVSVISVVELTKRMTITAVDVRSWLIPGALCALMYLAMSYPLSRLARHLEARLER
G

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=206, Percent_Identity=42.7184466019417, Blast_Score=148, Evalue=8e-37,
Organism=Escherichia coli, GI1787088, Length=209, Percent_Identity=29.6650717703349, Blast_Score=116, Evalue=3e-27,
Organism=Escherichia coli, GI1787030, Length=211, Percent_Identity=35.5450236966825, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1787085, Length=198, Percent_Identity=30.3030303030303, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1788646, Length=213, Percent_Identity=30.0469483568075, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1788228, Length=209, Percent_Identity=29.6650717703349, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI87082239, Length=216, Percent_Identity=33.3333333333333, Blast_Score=95, Evalue=9e-21,
Organism=Escherichia coli, GI1786873, Length=161, Percent_Identity=38.5093167701863, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1788648, Length=225, Percent_Identity=27.1111111111111, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1786874, Length=200, Percent_Identity=30, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1788649, Length=210, Percent_Identity=26.6666666666667, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1787087, Length=234, Percent_Identity=30.7692307692308, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1788645, Length=196, Percent_Identity=32.6530612244898, Blast_Score=82, Evalue=8e-17,
Organism=Escherichia coli, GI1787031, Length=197, Percent_Identity=26.3959390862944, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787086, Length=165, Percent_Identity=27.2727272727273, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI48994930, Length=135, Percent_Identity=32.5925925925926, Blast_Score=70, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 52388; Mature: 52388

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVLLALLSSCGAEQDSGLARVRRTGELRWGADAQGGEPYAMEDPDAPGGMRGFEVELAE
CHHHHHHHHHCCCCCCCCHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
ALARELGVRARFVQNDWSSLVPSLERGSFDVALNGLEVTPSRSGRILFTRPYYVFHLRLL
HHHHHHCCHHHHHHCCHHHHCCCHHCCCEEEEEECEEECCCCCCCEEEECCHHHHHHHHH
ARRDDAAITGLDALKGQRVGTLANSLAWDLLQRSGVEAVPYEGVEEPYIDLEQGRVRAVL
HHCCCCHHCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEHH
MDDIIAQRYGQPRPGLRVVGDVGEGYYAIAVRPGEEDLREALDTALGNIARSGELRAIFQ
HHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHH
RWGIDNAEQQRMVDWTDAQSREVLAPTQTARMGWGQLVLFLQAAGVTLLVSVGAMVLAIP
HHCCCCHHHHHCCCCCCCCCCCEECCCHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
LGVGLALTRLYGPGWAARLSTAYVELFRGTPVLLQLYVLYYGLAGVLRLDPISAAILGLG
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECHHHHHHHHCC
LNYAAYESEVYRAGVLAVPRGQLEAAMALGMPLRLALRRVILPQAFRVALPGVANDFIAL
CCHHHHHHHHHHCCEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LKDSSLVSVISVVELTKRMTITAVDVRSWLIPGALCALMYLAMSYPLSRLARHLEARLER
HCCCHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
G
C
>Mature Secondary Structure
MLVLLALLSSCGAEQDSGLARVRRTGELRWGADAQGGEPYAMEDPDAPGGMRGFEVELAE
CHHHHHHHHHCCCCCCCCHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
ALARELGVRARFVQNDWSSLVPSLERGSFDVALNGLEVTPSRSGRILFTRPYYVFHLRLL
HHHHHHCCHHHHHHCCHHHHCCCHHCCCEEEEEECEEECCCCCCCEEEECCHHHHHHHHH
ARRDDAAITGLDALKGQRVGTLANSLAWDLLQRSGVEAVPYEGVEEPYIDLEQGRVRAVL
HHCCCCHHCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEHH
MDDIIAQRYGQPRPGLRVVGDVGEGYYAIAVRPGEEDLREALDTALGNIARSGELRAIFQ
HHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHH
RWGIDNAEQQRMVDWTDAQSREVLAPTQTARMGWGQLVLFLQAAGVTLLVSVGAMVLAIP
HHCCCCHHHHHCCCCCCCCCCCEECCCHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
LGVGLALTRLYGPGWAARLSTAYVELFRGTPVLLQLYVLYYGLAGVLRLDPISAAILGLG
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEECHHHHHHHHCC
LNYAAYESEVYRAGVLAVPRGQLEAAMALGMPLRLALRRVILPQAFRVALPGVANDFIAL
CCHHHHHHHHHHCCEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LKDSSLVSVISVVELTKRMTITAVDVRSWLIPGALCALMYLAMSYPLSRLARHLEARLER
HCCCHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]