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The map label for this gene is nolT [H]

Identifier: 108759625

GI number: 108759625

Start: 7017753

End: 7018556

Strand: Reverse

Name: nolT [H]

Synonym: MXAN_5651

Alternate gene names: 108759625

Gene position: 7018556-7017753 (Counterclockwise)

Preceding gene: 108756769

Following gene: 108759819

Centisome position: 76.79

GC content: 69.78

Gene sequence:

>804_bases
ATGCGTTTGCATTTCCGTCGCGCATTCTTCCTCGTGCTGCTCGTGAGCGTCACCGCCTGCCGCGAGCGCATCCAGCATGG
TCTGGATGAGCGGCAGGCCAACGAGCTTCAATCCGTGCTCGTCGAGCGAGGGCTCGACGCGCGCAAGGTCCCCGAGGCGG
GCAAGAAGCCCACATGGTCCATCGAGGTGGCGGATGAGCACGCCTCGGACGCGGTCCGAATCCTGTCGGAGCTGGGGCTG
CCGAGGCCGAAGGAGGAGGTGGGCTGTGACGTCTTCGGCGGTGGCGGGCTGGTTCGCACGCCGGTGGAGGAGAGCGTCTG
CCGAGTGAGGGTGATGGAGCGGAGCCTGGAGAAGACGCTCCAATCCGTGGAAGGGGTGCTGCTCGCGCGCGTCCACCTGG
TGGTGCCCGCGCCGCCGAGAGTGGGGCAGGCCCCGGGTCCATCGAAGGCATCAGCCATGCTTCGCGTGGCGCCGGGCAAT
GCGGCCCGGGTGCGGCAATCCTCCGAGACGTTGAAGGTCCTCCTCGCGGGGGGGGTGGAGGGCCTGTCGCCGGAAGCCGT
CTCGTTGTTGGTGGACGAGGTCTCCACCCGAGTGGAGGCTCCGACGGAGGTGGGCGTGTCTCCGCTGACCCGACTGCGTG
CCCTCTTGGCGGTGTTGGGCCTGATGGTGACGGGGCTGTCGGTGGCGCTGGTGCTGGTGACGCTCCGGATGCGGCACTAC
CGCGACCGGACACCGACTCCGTCCGCGCCGCCCGGACCCGCGCGGCCCGTGTTGTCACCGGGACCGGCGCGCAAGGTGGC
GTGA

Upstream 100 bases:

>100_bases
TACCGGGCGAGCCAGGAGCTCGACCTCGCCGGCAAGGTCGTCGAGAAGGCGACCGGCGGCGTCAAGCAGGTCCTCCAGAC
CCAGGTTTGAGGAGCACCCG

Downstream 100 bases:

>100_bases
GGTGTCCATGGAGAGCGAACGCATGGATGCGACACGCGTAGGGCGCAAGCCTCGGCCAGTCCGGAGCTCCGCGTCCGTCC
GGGCCACTGCACCGACCGAG

Product: YscJ/FliF family type III secretion lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MRLHFRRAFFLVLLVSVTACRERIQHGLDERQANELQSVLVERGLDARKVPEAGKKPTWSIEVADEHASDAVRILSELGL
PRPKEEVGCDVFGGGGLVRTPVEESVCRVRVMERSLEKTLQSVEGVLLARVHLVVPAPPRVGQAPGPSKASAMLRVAPGN
AARVRQSSETLKVLLAGGVEGLSPEAVSLLVDEVSTRVEAPTEVGVSPLTRLRALLAVLGLMVTGLSVALVLVTLRMRHY
RDRTPTPSAPPGPARPVLSPGPARKVA

Sequences:

>Translated_267_residues
MRLHFRRAFFLVLLVSVTACRERIQHGLDERQANELQSVLVERGLDARKVPEAGKKPTWSIEVADEHASDAVRILSELGL
PRPKEEVGCDVFGGGGLVRTPVEESVCRVRVMERSLEKTLQSVEGVLLARVHLVVPAPPRVGQAPGPSKASAMLRVAPGN
AARVRQSSETLKVLLAGGVEGLSPEAVSLLVDEVSTRVEAPTEVGVSPLTRLRALLAVLGLMVTGLSVALVLVTLRMRHY
RDRTPTPSAPPGPARPVLSPGPARKVA
>Mature_267_residues
MRLHFRRAFFLVLLVSVTACRERIQHGLDERQANELQSVLVERGLDARKVPEAGKKPTWSIEVADEHASDAVRILSELGL
PRPKEEVGCDVFGGGGLVRTPVEESVCRVRVMERSLEKTLQSVEGVLLARVHLVVPAPPRVGQAPGPSKASAMLRVAPGN
AARVRQSSETLKVLLAGGVEGLSPEAVSLLVDEVSTRVEAPTEVGVSPLTRLRALLAVLGLMVTGLSVALVLVTLRMRHY
RDRTPTPSAPPGPARPVLSPGPARKVA

Specific function: Regulates cultivar-specific nodulation of soybean [H]

COG id: COG4669

COG function: function code U; Type III secretory pathway, lipoprotein EscJ

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yscJ lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003282
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF [H]

EC number: NA

Molecular weight: Translated: 28638; Mature: 28638

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLHFRRAFFLVLLVSVTACRERIQHGLDERQANELQSVLVERGLDARKVPEAGKKPTWS
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE
IEVADEHASDAVRILSELGLPRPKEEVGCDVFGGGGLVRTPVEESVCRVRVMERSLEKTL
EEECCHHHHHHHHHHHHCCCCCCHHHHCCEEECCCCEEECCHHHHHHHHHHHHHHHHHHH
QSVEGVLLARVHLVVPAPPRVGQAPGPSKASAMLRVAPGNAARVRQSSETLKVLLAGGVE
HHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCC
GLSPEAVSLLVDEVSTRVEAPTEVGVSPLTRLRALLAVLGLMVTGLSVALVLVTLRMRHY
CCCHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDRTPTPSAPPGPARPVLSPGPARKVA
CCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRLHFRRAFFLVLLVSVTACRERIQHGLDERQANELQSVLVERGLDARKVPEAGKKPTWS
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE
IEVADEHASDAVRILSELGLPRPKEEVGCDVFGGGGLVRTPVEESVCRVRVMERSLEKTL
EEECCHHHHHHHHHHHHCCCCCCHHHHCCEEECCCCEEECCHHHHHHHHHHHHHHHHHHH
QSVEGVLLARVHLVVPAPPRVGQAPGPSKASAMLRVAPGNAARVRQSSETLKVLLAGGVE
HHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCC
GLSPEAVSLLVDEVSTRVEAPTEVGVSPLTRLRALLAVLGLMVTGLSVALVLVTLRMRHY
CCCHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDRTPTPSAPPGPARPVLSPGPARKVA
CCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8412662 [H]