| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758922
Identifier: 108758922
GI number: 108758922
Start: 4544092
End: 4546737
Strand: Reverse
Name: 108758922
Synonym: MXAN_3780
Alternate gene names: NA
Gene position: 4546737-4544092 (Counterclockwise)
Preceding gene: 108763257
Following gene: 108761961
Centisome position: 49.75
GC content: 68.56
Gene sequence:
>2646_bases GTGCCTTCCGTGGTTGCCGGGCTTCCGGGATCAGGGTCAGGATTGAGGGATAGCCTCAACGTCGACCTTCATCTGAGCCC GCGAATGCCCAAAATCCTTCTTCGTGCCTGTGCCGTGGTCCTGCTCGCAGCCACCAGCACCGCGCAGGCGCAAGCCGTCC CACCGGCCCCCTCCGAGGCCGAGGACTCCTCCACGCCCGCCAACCCCGTGCCGGTGGACGCCCCACCTGATGCGCAAGCG GCGCCACCCGAAGCCGAACCGGGCGAGGTGCCGGCCAGCGCTGTCACTGAAGACGTTCCAGCGGTGAGCCCCGAGGTGCC GCCCGTTCCGCCGAATGGTGGCGCCTTCGCGAAGGACAACGCGCTCGTCCCCGAGGGAACGCCGTTCCTGCCGCTGCACA TCGAAGACCCCGCACGGGCCCGTGCCCTGGCCGAGGAGACGGAGCGCAGCGCGCCGGCCCTGGTCGTCAGCGGCGGCATC AGCCTGGGCGCGTATCAGGCGGGGTTCCTCTCCACGCTGGTCCGGTTCTGGAGCGTCGCGCAGCGAGAAGGCGCACAGGC AGACCTGGGCAACCCGGCGCCGCGAGTGTGGACGGGCGCCTCGGCGGGGGCGGTGAACGCGCTGCTCGGGGGACTGGCCT CGTGTGACACGGCGTTCGCCCAGCCCACGTGGTCTCCAGAGCAGAGCCTCTTCTGGACCGTGTGGATCGACCAGCTCGAC CTGGGGCGGCTGCTCCCCGAAGAGCGGAATGAGCCACCTCAGGGCACGCACCTCTTCAGCGAGCCCCACATGCAGGACAC CCTGCAGCTCATCCTGAAGAAGGCCCAGACGACCCGCTTCAAGGAGGACTGCACCTTCGCCTACGGCATCACCGTGACGA ACCTGCGCGGGCGCGAAGTTCCCTTCGGCGAGGGCGGACCCGACGCCCAGTTCAAGCTGAAGCGCGTGACGGAGAAGCTG GTCGTCCAGGTGATGACGCAGGGCGAAGGGAAGCTCACCGCCCGGCTGCCATTCATGGAGGGCGCGGCGAGCGCGTCGTT CCCCCACATCGGGGTGAAGCCGAAGGAGCTCGCATACTACCCGGCGCTGGGCGCCCAACCAACGGGCGACGGCGGACACG AGGTGTCCCTGTCGAACCTGCTGCTCACGCCGCAGGCCTCCGGGGCCTTTCCGCTCGCGTTCCCGCCTGTCCCCGTCGAG GTCTCCTTCTTCAACCAGACGCAATGGGGGCCCCTGGAGTCCCTCAAGCTCATTGACGGCGGCGTGCTCAACAACAACCC CGTGGACCTGGCGGTGCGGCTCGGCTCGCGGTGGGTGGAGCGCAGCACCTCGCGAGAGACGACGCTCAATCGCGAGCGCT TCCCCGTCGTCTACCTGGACCAGGACGCGGTCGCCTGGGACTGGGCATCACCGCCCGAACGGCCGGATCGCTCCCGCAGC CCCTTGGACGAAGCCTACTTCCAGCACCTGGGCAACGTGCTGAACGCCGCGCGCGACAGCGCCGTGCTCAACACGCTGGA GCACGACATCAATCTGTCGGGCCGCATCCAGATTCCTCGCCGCACGTCCGTGCTCCCGTCGGAGTTCCAGTTCGCGATGA TGGGCTTCTTCGACCGGCGCTTCCGCGAGCACGACTTCTACCGTGGCATGCAGGACGCCATCCGCTTCCTGTCGACCCAG CTCACCTCGACGCGCGCCGTCGACCTGCTGGTGCCTCGCGCCGGCAAGGAGCGCCTGAGGGATCGTGAGCTCCGCGTGCT GAACGTCCTGGGCATCGACTCGGCCGGCTTCCGCTGCGTCGTGGGCAATGACTGCACGACGACGCCGCAGTTGGGGCGGC TGCGTCAGGCCACCAATGCCCTGACGCAGAAGGCGGAAGCGGGACAGCTCCGGAAGGGACAGGTCGACGACCTTCTCACC GTGCTGGGCGACGTGGGCTACCAGTACAGCGAAGGCGTCATGGAGGGGATTGAAGCCACGGGGACCCGAGAGGACCTCAT CCCGGTCCGCCAACGCGTGGGCACCGCCTTCCACAGCCTCGTCACGCAGCAGCGGGGCAACCTCAAGATTCCGCTCCGTC CCGCGGGCGCCGCGCTCCTGGACGAGTGGCTGACGTATTCGAAACCGCACCATGTCTGGACGCTCAGCGCCATGCGCCAG CGCGGTGTGGGTGTGGGCGTGGAGCTTCCGTTCCTGGCGTCCGAGCAGGGACGCGAGGACTACGCCTACAGCCGCAATGA GTGGCGCTTCGGCGCCGTGCTGTCCGGGCTGGGTGTGCGGGACATGGACCAGCTCGTGCCCAACGACACCCGCATCCGTT GGGCCTCGCTGGGCCTCTACATCGACTGTGTCTCCGACATGGACGGCTTCTCCGGCGCGATTCCGTTCCTCGACCTGGGG CCGTACGTCCGGTGGCGCGCCGGACTGGGCGTTTCCGCGGGCTACCTCAGCAAGCCCAATGAATGGGCGCTGACGGTCCC GGAGGCCCGCCTGGGCGTGGACCTGGCGGAGATGGTGGGCGTGCGCCTCACGATGCCGGTCTACCTCCTCAAGAAGACGG AGGGAGAGCGGCGGCTCATCCGAGGGACGCCCAAGTACTTCAAGGAGCTAGGCCTGGGCGTCGAGTTCCTCCTCACGCGG TGGTGA
Upstream 100 bases:
>100_bases GTTCGTCGCGGCGCCGGAGCAGGCCGCCGCCGACAGCTCACACGAGCTGCAGAAGTCGTAGGCCTTTGAACCCAGGGCGC CGGGGACGACAGCTTCCCCG
Downstream 100 bases:
>100_bases CCTTCAGCGCGCTCCGGAGCCGGTCCGCCAGCTCGCGGACCCCCGGGGCGCGCAGCACGCTGTAGTGGTCGCCGGACACG GCGTGCTGCTCCAGTCCGGT
Product: patatin-like phospholipase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 881; Mature: 880
Protein sequence:
>881_residues MPSVVAGLPGSGSGLRDSLNVDLHLSPRMPKILLRACAVVLLAATSTAQAQAVPPAPSEAEDSSTPANPVPVDAPPDAQA APPEAEPGEVPASAVTEDVPAVSPEVPPVPPNGGAFAKDNALVPEGTPFLPLHIEDPARARALAEETERSAPALVVSGGI SLGAYQAGFLSTLVRFWSVAQREGAQADLGNPAPRVWTGASAGAVNALLGGLASCDTAFAQPTWSPEQSLFWTVWIDQLD LGRLLPEERNEPPQGTHLFSEPHMQDTLQLILKKAQTTRFKEDCTFAYGITVTNLRGREVPFGEGGPDAQFKLKRVTEKL VVQVMTQGEGKLTARLPFMEGAASASFPHIGVKPKELAYYPALGAQPTGDGGHEVSLSNLLLTPQASGAFPLAFPPVPVE VSFFNQTQWGPLESLKLIDGGVLNNNPVDLAVRLGSRWVERSTSRETTLNRERFPVVYLDQDAVAWDWASPPERPDRSRS PLDEAYFQHLGNVLNAARDSAVLNTLEHDINLSGRIQIPRRTSVLPSEFQFAMMGFFDRRFREHDFYRGMQDAIRFLSTQ LTSTRAVDLLVPRAGKERLRDRELRVLNVLGIDSAGFRCVVGNDCTTTPQLGRLRQATNALTQKAEAGQLRKGQVDDLLT VLGDVGYQYSEGVMEGIEATGTREDLIPVRQRVGTAFHSLVTQQRGNLKIPLRPAGAALLDEWLTYSKPHHVWTLSAMRQ RGVGVGVELPFLASEQGREDYAYSRNEWRFGAVLSGLGVRDMDQLVPNDTRIRWASLGLYIDCVSDMDGFSGAIPFLDLG PYVRWRAGLGVSAGYLSKPNEWALTVPEARLGVDLAEMVGVRLTMPVYLLKKTEGERRLIRGTPKYFKELGLGVEFLLTR W
Sequences:
>Translated_881_residues MPSVVAGLPGSGSGLRDSLNVDLHLSPRMPKILLRACAVVLLAATSTAQAQAVPPAPSEAEDSSTPANPVPVDAPPDAQA APPEAEPGEVPASAVTEDVPAVSPEVPPVPPNGGAFAKDNALVPEGTPFLPLHIEDPARARALAEETERSAPALVVSGGI SLGAYQAGFLSTLVRFWSVAQREGAQADLGNPAPRVWTGASAGAVNALLGGLASCDTAFAQPTWSPEQSLFWTVWIDQLD LGRLLPEERNEPPQGTHLFSEPHMQDTLQLILKKAQTTRFKEDCTFAYGITVTNLRGREVPFGEGGPDAQFKLKRVTEKL VVQVMTQGEGKLTARLPFMEGAASASFPHIGVKPKELAYYPALGAQPTGDGGHEVSLSNLLLTPQASGAFPLAFPPVPVE VSFFNQTQWGPLESLKLIDGGVLNNNPVDLAVRLGSRWVERSTSRETTLNRERFPVVYLDQDAVAWDWASPPERPDRSRS PLDEAYFQHLGNVLNAARDSAVLNTLEHDINLSGRIQIPRRTSVLPSEFQFAMMGFFDRRFREHDFYRGMQDAIRFLSTQ LTSTRAVDLLVPRAGKERLRDRELRVLNVLGIDSAGFRCVVGNDCTTTPQLGRLRQATNALTQKAEAGQLRKGQVDDLLT VLGDVGYQYSEGVMEGIEATGTREDLIPVRQRVGTAFHSLVTQQRGNLKIPLRPAGAALLDEWLTYSKPHHVWTLSAMRQ RGVGVGVELPFLASEQGREDYAYSRNEWRFGAVLSGLGVRDMDQLVPNDTRIRWASLGLYIDCVSDMDGFSGAIPFLDLG PYVRWRAGLGVSAGYLSKPNEWALTVPEARLGVDLAEMVGVRLTMPVYLLKKTEGERRLIRGTPKYFKELGLGVEFLLTR W >Mature_880_residues PSVVAGLPGSGSGLRDSLNVDLHLSPRMPKILLRACAVVLLAATSTAQAQAVPPAPSEAEDSSTPANPVPVDAPPDAQAA PPEAEPGEVPASAVTEDVPAVSPEVPPVPPNGGAFAKDNALVPEGTPFLPLHIEDPARARALAEETERSAPALVVSGGIS LGAYQAGFLSTLVRFWSVAQREGAQADLGNPAPRVWTGASAGAVNALLGGLASCDTAFAQPTWSPEQSLFWTVWIDQLDL GRLLPEERNEPPQGTHLFSEPHMQDTLQLILKKAQTTRFKEDCTFAYGITVTNLRGREVPFGEGGPDAQFKLKRVTEKLV VQVMTQGEGKLTARLPFMEGAASASFPHIGVKPKELAYYPALGAQPTGDGGHEVSLSNLLLTPQASGAFPLAFPPVPVEV SFFNQTQWGPLESLKLIDGGVLNNNPVDLAVRLGSRWVERSTSRETTLNRERFPVVYLDQDAVAWDWASPPERPDRSRSP LDEAYFQHLGNVLNAARDSAVLNTLEHDINLSGRIQIPRRTSVLPSEFQFAMMGFFDRRFREHDFYRGMQDAIRFLSTQL TSTRAVDLLVPRAGKERLRDRELRVLNVLGIDSAGFRCVVGNDCTTTPQLGRLRQATNALTQKAEAGQLRKGQVDDLLTV LGDVGYQYSEGVMEGIEATGTREDLIPVRQRVGTAFHSLVTQQRGNLKIPLRPAGAALLDEWLTYSKPHHVWTLSAMRQR GVGVGVELPFLASEQGREDYAYSRNEWRFGAVLSGLGVRDMDQLVPNDTRIRWASLGLYIDCVSDMDGFSGAIPFLDLGP YVRWRAGLGVSAGYLSKPNEWALTVPEARLGVDLAEMVGVRLTMPVYLLKKTEGERRLIRGTPKYFKELGLGVEFLLTRW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 95955; Mature: 95824
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSVVAGLPGSGSGLRDSLNVDLHLSPRMPKILLRACAVVLLAATSTAQAQAVPPAPSEA CCCCEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC EDSSTPANPVPVDAPPDAQAAPPEAEPGEVPASAVTEDVPAVSPEVPPVPPNGGAFAKDN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC ALVPEGTPFLPLHIEDPARARALAEETERSAPALVVSGGISLGAYQAGFLSTLVRFWSVA CCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH QREGAQADLGNPAPRVWTGASAGAVNALLGGLASCDTAFAQPTWSPEQSLFWTVWIDQLD HHCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHH LGRLLPEERNEPPQGTHLFSEPHMQDTLQLILKKAQTTRFKEDCTFAYGITVTNLRGREV HHHCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCC PFGEGGPDAQFKLKRVTEKLVVQVMTQGEGKLTARLPFMEGAASASFPHIGVKPKELAYY CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHEEC PALGAQPTGDGGHEVSLSNLLLTPQASGAFPLAFPPVPVEVSFFNQTQWGPLESLKLIDG CCCCCCCCCCCCCEEEECEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHCC GVLNNNPVDLAVRLGSRWVERSTSRETTLNRERFPVVYLDQDAVAWDWASPPERPDRSRS CCCCCCCCEEEEEHHHHHHHHCCCCHHCCCCCCCCEEEECCCCEEECCCCCCCCCCCCCC PLDEAYFQHLGNVLNAARDSAVLNTLEHDINLSGRIQIPRRTSVLPSEFQFAMMGFFDRR CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH FREHDFYRGMQDAIRFLSTQLTSTRAVDLLVPRAGKERLRDRELRVLNVLGIDSAGFRCV HHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCEEEEEEEECCCCCCEEE VGNDCTTTPQLGRLRQATNALTQKAEAGQLRKGQVDDLLTVLGDVGYQYSEGVMEGIEAT ECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCC GTREDLIPVRQRVGTAFHSLVTQQRGNLKIPLRPAGAALLDEWLTYSKPHHVWTLSAMRQ CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEHHHHHH RGVGVGVELPFLASEQGREDYAYSRNEWRFGAVLSGLGVRDMDQLVPNDTRIRWASLGLY CCCCCCEECCCCCCCCCCCCCCCCCCCEEHHHHHHCCCCHHHHHHCCCCCEEEEEECCEE IDCVSDMDGFSGAIPFLDLGPYVRWRAGLGVSAGYLSKPNEWALTVPEARLGVDLAEMVG EEEECCCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCCCEEEECCCHHHCCCHHHHHC VRLTMPVYLLKKTEGERRLIRGTPKYFKELGLGVEFLLTRW CEEECCEEEEECCCCCHHHHCCCHHHHHHHCCCHHHHEECC >Mature Secondary Structure PSVVAGLPGSGSGLRDSLNVDLHLSPRMPKILLRACAVVLLAATSTAQAQAVPPAPSEA CCCEECCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC EDSSTPANPVPVDAPPDAQAAPPEAEPGEVPASAVTEDVPAVSPEVPPVPPNGGAFAKDN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC ALVPEGTPFLPLHIEDPARARALAEETERSAPALVVSGGISLGAYQAGFLSTLVRFWSVA CCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH QREGAQADLGNPAPRVWTGASAGAVNALLGGLASCDTAFAQPTWSPEQSLFWTVWIDQLD HHCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHH LGRLLPEERNEPPQGTHLFSEPHMQDTLQLILKKAQTTRFKEDCTFAYGITVTNLRGREV HHHCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCC PFGEGGPDAQFKLKRVTEKLVVQVMTQGEGKLTARLPFMEGAASASFPHIGVKPKELAYY CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHEEC PALGAQPTGDGGHEVSLSNLLLTPQASGAFPLAFPPVPVEVSFFNQTQWGPLESLKLIDG CCCCCCCCCCCCCEEEECEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHCC GVLNNNPVDLAVRLGSRWVERSTSRETTLNRERFPVVYLDQDAVAWDWASPPERPDRSRS CCCCCCCCEEEEEHHHHHHHHCCCCHHCCCCCCCCEEEECCCCEEECCCCCCCCCCCCCC PLDEAYFQHLGNVLNAARDSAVLNTLEHDINLSGRIQIPRRTSVLPSEFQFAMMGFFDRR CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH FREHDFYRGMQDAIRFLSTQLTSTRAVDLLVPRAGKERLRDRELRVLNVLGIDSAGFRCV HHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCEEEEEEEECCCCCCEEE VGNDCTTTPQLGRLRQATNALTQKAEAGQLRKGQVDDLLTVLGDVGYQYSEGVMEGIEAT ECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCC GTREDLIPVRQRVGTAFHSLVTQQRGNLKIPLRPAGAALLDEWLTYSKPHHVWTLSAMRQ CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEHHHHHH RGVGVGVELPFLASEQGREDYAYSRNEWRFGAVLSGLGVRDMDQLVPNDTRIRWASLGLY CCCCCCEECCCCCCCCCCCCCCCCCCCEEHHHHHHCCCCHHHHHHCCCCCEEEEEECCEE IDCVSDMDGFSGAIPFLDLGPYVRWRAGLGVSAGYLSKPNEWALTVPEARLGVDLAEMVG EEEECCCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCCCEEEECCCHHHCCCHHHHHC VRLTMPVYLLKKTEGERRLIRGTPKYFKELGLGVEFLLTRW CEEECCEEEEECCCCCHHHHCCCHHHHHHHCCCHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA